RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 SHC4Q6S5L8 630 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 SND1Q7KZF4 910 aaKnown RBP eCLIP12.85□□□□□ -0.35
PUM3-202ENST00000397885 APTXQ7Z2E3 356 aaKnown RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 ZNF572Q7Z3I7 529 aaPredicted RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 CD302Q8IX05 232 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 ACRBPQ8NEB7 543 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 RASSF8Q8NHQ8 419 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 SCLT1Q96NL6 688 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 OSBPL9Q96SU4 736 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 SEC62Q99442 399 aaKnown RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
PUM3-202ENST00000397885 ZNF831Q5JPB2 1677 aa12.85□□□□□ -0.35
PUM3-202ENST00000397885 GHRP10912 638 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 CDC27P30260 824 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 RIPK1Q13546 671 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 MORC3Q14149 939 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 SPECC1Q5M775 1068 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 CAPRIN2Q6IMN6 1127 aaKnown RBP12.84□□□□□ -0.35
PUM3-202ENST00000397885 EAF2Q96CJ1 260 aaPredicted RBP12.84□□□□□ -0.35
PUM3-202ENST00000397885 SPAG5Q96R06 1193 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 SYT17Q9BSW7 474 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 FHDC1Q9C0D6 1143 aaPredicted RBP12.84□□□□□ -0.35
PUM3-202ENST00000397885 ADD3Q9UEY8 706 aaKnown RBP12.84□□□□□ -0.35
PUM3-202ENST00000397885 MAN1B1Q9UKM7 699 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 MRC1P22897 1456 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 SASH1O94885 1247 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 POLR3DP05423 398 aaPredicted RBP12.84□□□□□ -0.35
PUM3-202ENST00000397885 MDH1P40925 334 aaKnown RBP12.84□□□□□ -0.35
PUM3-202ENST00000397885 RAB27AP51159 221 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 PLCD1P51178 756 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 FMR1Q06787 632 aaKnown RBP eCLIP12.84□□□□□ -0.35
PUM3-202ENST00000397885 GLE1Q53GS7 698 aaKnown RBP12.84□□□□□ -0.35
PUM3-202ENST00000397885 ANKRD20A8PQ5CZ79 823 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 ARL8AQ96BM9 186 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 SUCLG2Q96I99 432 aa12.84□□□□□ -0.35
PUM3-202ENST00000397885 HEG1Q9ULI3 1381 aa12.83□□□□□ -0.35
PUM3-202ENST00000397885 SCN11AQ9UI33 1791 aa12.83□□□□□ -0.35
PUM3-202ENST00000397885 CCT2P78371 535 aaKnown RBP12.83□□□□□ -0.36
PUM3-202ENST00000397885 NEXNQ0ZGT2 675 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 MIS18BP1Q6P0N0 1132 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 ARFGAP2Q8N6H7 521 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 RNPC3Q96LT9 517 aaKnown RBP12.83□□□□□ -0.36
PUM3-202ENST00000397885 GDAP1L1Q96MZ0 367 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.36
PUM3-202ENST00000397885 TRPC6Q9Y210 931 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 UBR3Q6ZT12 1888 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 FRMD3A2A2Y4 597 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 SMNDC1O75940 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
PUM3-202ENST00000397885 GYPCP04921 128 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 CASP14P31944 242 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 KIF23Q02241 960 aaPredicted RBP12.83□□□□□ -0.36
PUM3-202ENST00000397885 KCNB1Q14721 858 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 E2F5Q15329 346 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 LONRF3Q496Y0 759 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 SPATA1Q5VX52 437 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 BZW1Q7L1Q6 419 aaKnown RBP12.83□□□□□ -0.36
PUM3-202ENST00000397885 MFN1Q8IWA4 741 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 PARD3BQ8TEW8 1205 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 CUL5Q93034 780 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 BOLA2Q9H3K6 86 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 DDX21Q9NR30 783 aaKnown RBP eCLIP12.83□□□□□ -0.36
PUM3-202ENST00000397885 ABHD10Q9NUJ1 306 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 IRAK4Q9NWZ3 460 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 KCNH3Q9ULD8 1083 aa12.83□□□□□ -0.36
PUM3-202ENST00000397885 TEX33O43247 280 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 ERVK-24P63145 666 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 PROSER3Q2NL68 480 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 SPDYE1Q8NFV5 336 aaPredicted RBP12.82□□□□□ -0.36
PUM3-202ENST00000397885 TRIM58Q8NG06 486 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 JAKMIP2Q96AA8 810 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 SAMSN1Q9NSI8 373 aaKnown RBP12.82□□□□□ -0.36
PUM3-202ENST00000397885 IQSEC3Q9UPP2 1182 aaPredicted RBP12.82□□□□□ -0.36
PUM3-202ENST00000397885 COL15A1P39059 1388 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 UBN2Q6ZU65 1347 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 HMGB1P1B2RPK0 211 aaPredicted RBP12.82□□□□□ -0.36
PUM3-202ENST00000397885 AP1G2O75843 785 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 ATP6V1G2O95670 118 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 ABL1P00519 1130 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 RPSAP08865 295 aaKnown RBP12.82□□□□□ -0.36
PUM3-202ENST00000397885 NR1D1P20393 614 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 HDLBPQ00341 1268 aaKnown RBP12.82□□□□□ -0.36
PUM3-202ENST00000397885 POSTNQ15063 836 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 PTPAQ15257 358 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 KANK3Q6NY19 840 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 STOX1Q6ZVD7 989 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 APLFQ8IW19 511 aaPredicted RBP12.82□□□□□ -0.36
PUM3-202ENST00000397885 GSPT2Q8IYD1 628 aaKnown RBP12.82□□□□□ -0.36
PUM3-202ENST00000397885 KLHL23Q8NBE8 558 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 LINC00116Q8NCU8 138 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 CYFIP2Q96F07 1278 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 LRRC2Q9BYS8 371 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 KDM4CQ9H3R0 1056 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 SLC39A2Q9NP94 309 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 C15orf41Q9Y2V0 281 aa12.82□□□□□ -0.36
PUM3-202ENST00000397885 PPP1R12BO60237 982 aaPredicted RBP12.81□□□□□ -0.36
PUM3-202ENST00000397885 COQ9O75208 318 aa12.81□□□□□ -0.36
PUM3-202ENST00000397885 SKAP2O75563 359 aaPredicted RBP12.81□□□□□ -0.36
PUM3-202ENST00000397885 RTN3O95197 1032 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms