RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 AATFQ9NY61 560 aaKnown RBP eCLIP10.78□□□□□ -0.68
CDRT1-204ENST00000395906 E7EVH7 732 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 H3BQV1 296 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 N4BP3O15049 544 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 RNMTO43148 476 aaKnown RBP10.77□□□□□ -0.68
CDRT1-204ENST00000395906 SLC3A2P08195 630 aaKnown RBP10.77□□□□□ -0.68
CDRT1-204ENST00000395906 MDH1P40925 334 aaKnown RBP10.77□□□□□ -0.68
CDRT1-204ENST00000395906 PIP4K2AP48426 406 aaPredicted RBP10.77□□□□□ -0.68
CDRT1-204ENST00000395906 NNTQ13423 1086 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 LBRQ14739 615 aaKnown RBP10.77□□□□□ -0.68
CDRT1-204ENST00000395906 PPP1R7Q15435 360 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 IFFO2Q5TF58 517 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 SND1Q7KZF4 910 aaKnown RBP eCLIP10.77□□□□□ -0.68
CDRT1-204ENST00000395906 GSPT2Q8IYD1 628 aaKnown RBP10.77□□□□□ -0.68
CDRT1-204ENST00000395906 RMDN2Q96LZ7 410 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 PIDD1Q9HB75 910 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 ATXN10Q9UBB4 475 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 HDAC6Q9UBN7 1215 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 TTF2Q9UNY4 1162 aaKnown RBP10.77□□□□□ -0.68
CDRT1-204ENST00000395906 GMEB1Q9Y692 573 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 MYH15Q9Y2K3 1946 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 COL18A1P39060 1754 aa10.77□□□□□ -0.68
CDRT1-204ENST00000395906 SOWAHDA6NJG2 315 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 PARP1P09874 1014 aaKnown RBP10.77□□□□□ -0.69
CDRT1-204ENST00000395906 CYP11B2P19099 503 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 PSMC4P43686 418 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 PPP4R3AQ6IN85 833 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 CCDC80Q76M96 950 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 RASGRP2Q7LDG7 609 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 RNF168Q8IYW5 571 aaPredicted RBP10.77□□□□□ -0.69
CDRT1-204ENST00000395906 GBP7Q8N8V2 638 aaPredicted RBP10.77□□□□□ -0.69
CDRT1-204ENST00000395906 MEIS3Q99687 375 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 FAM167BQ9BTA0 163 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 INTS13Q9NVM9 706 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 TMEM98Q9Y2Y6 226 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 COL5A2P05997 1499 aaPredicted RBP10.77□□□□□ -0.69
CDRT1-204ENST00000395906 UBN2Q6ZU65 1347 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 NHSL1Q5SYE7 1610 aa10.77□□□□□ -0.69
CDRT1-204ENST00000395906 F6X3S4 739 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 PHKG2P15735 406 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 CCND1P24385 295 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 ME1P48163 572 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 CCNG1P51959 295 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 MRPS35P82673 323 aaKnown RBP10.76□□□□□ -0.69
CDRT1-204ENST00000395906 SGSM1Q2NKQ1 1148 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 PHC3Q8NDX5 983 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 AGAP11Q8TF27 550 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 RUBCNQ92622 972 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 UTP6Q9NYH9 597 aaKnown RBP10.76□□□□□ -0.69
CDRT1-204ENST00000395906 PPIP5K2O43314 1243 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 ALADP13716 330 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 APBA1Q02410 837 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 CKAP4Q07065 602 aaKnown RBP10.76□□□□□ -0.69
CDRT1-204ENST00000395906 ZMYM1Q5SVZ6 1142 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 MAATS1Q7Z4T9 603 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 BRF1Q92994 677 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 OPTNQ96CV9 577 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 NDST4Q9H3R1 872 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 GALNT8Q9NY28 637 aa10.76□□□□□ -0.69
CDRT1-204ENST00000395906 A0A1W2PQ27 194 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 A0A1W2PQ64 194 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 A0A1W2PQD8 194 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 TMEM221A6NGB7 291 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 ZMYND10O75800 440 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 MBD4O95243 580 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 VIL1P09327 827 aaKnown RBP10.75□□□□□ -0.69
CDRT1-204ENST00000395906 NR1D1P20393 614 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 PRPF4BQ13523 1007 aaKnown RBP10.75□□□□□ -0.69
CDRT1-204ENST00000395906 PTPN21Q16825 1174 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 RAD9BQ6WBX8 426 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 TRAPPC11Q7Z392 1133 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 CACNA2D3Q8IZS8 1091 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 SH2D3CQ8N5H7 860 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 CCDC63Q8NA47 563 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 SLC35B4Q969S0 331 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 CWC25Q9NXE8 425 aaPredicted RBP10.75□□□□□ -0.69
CDRT1-204ENST00000395906 TMCO1Q9UM00 188 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 A0A0U1RQJ8 604 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 CFAP73A6NFT4 308 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 SPDYE5A6NIY4 337 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 AKR1B15C9JRZ8 316 aaPredicted RBP10.75□□□□□ -0.69
CDRT1-204ENST00000395906 F8VZ95 297 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 VCAM1P19320 739 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 HSPA1LP34931 641 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 CCDC70Q6NSX1 233 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 SMYD1Q8NB12 490 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 ZCRB1Q8TBF4 217 aaKnown RBP10.75□□□□□ -0.69
CDRT1-204ENST00000395906 CCT6BQ92526 530 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 SEC16BQ96JE7 1060 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 SPG7Q9UQ90 795 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 CRYBG1Q9Y4K1 1723 aa10.75□□□□□ -0.69
CDRT1-204ENST00000395906 GMNCA6NCL1 334 aa10.74□□□□□ -0.69
CDRT1-204ENST00000395906 RAB11FIP3O75154 756 aa10.74□□□□□ -0.69
CDRT1-204ENST00000395906 GSTA1P08263 222 aa10.74□□□□□ -0.69
CDRT1-204ENST00000395906 CLTAP09496 248 aa10.74□□□□□ -0.69
CDRT1-204ENST00000395906 IL2RBP14784 551 aa10.74□□□□□ -0.69
CDRT1-204ENST00000395906 ZKSCAN1P17029 563 aaPredicted RBP10.74□□□□□ -0.69
CDRT1-204ENST00000395906 PSMA5P28066 241 aa10.74□□□□□ -0.69
CDRT1-204ENST00000395906 CUL4BQ13620 913 aa10.74□□□□□ -0.69
CDRT1-204ENST00000395906 ZNF268Q14587 947 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms