RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 TMTC3Q6ZXV5 915 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 LRRN4CLQ8ND94 238 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 PLA2G12BQ9BX93 195 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 TMEM60Q9H2L4 133 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 RBM28Q9NW13 759 aaKnown RBP13.12□□□□□ -0.31
DDR1-227ENST00000376570 SFI1A8K8P3 1242 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 B4DLN1 442 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 CALML3P27482 149 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 PAK1Q13153 545 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 WWC2Q6AWC2 1192 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 REXO1Q8N1G1 1221 aaKnown RBP13.12□□□□□ -0.31
DDR1-227ENST00000376570 GJA3Q9Y6H8 435 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 GYS2P54840 703 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 NTRK3Q16288 839 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 SPECC1LQ69YQ0 1117 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 KIFC2Q96AC6 838 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 MRFAP1L1Q96HT8 127 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 TMOD2Q9NZR1 351 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 ARPP21Q9UBL0 812 aaPredicted RBP13.12□□□□□ -0.31
DDR1-227ENST00000376570 PRDM4Q9UKN5 801 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 MED1Q15648 1581 aaPredicted RBP13.11□□□□□ -0.31
DDR1-227ENST00000376570 NONOQ15233 471 aaKnown RBP eCLIP13.11□□□□□ -0.31
DDR1-227ENST00000376570 TDRD3Q9H7E2 651 aaKnown RBP13.11□□□□□ -0.31
DDR1-227ENST00000376570 A0A0U1RQJ8 604 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 TMCO5BA8MYB1 307 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 NEMFO60524 1076 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 AKR1B1P15121 316 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 PTPREP23469 700 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 PRR16Q569H4 304 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 RESP18Q5W5W9 173 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 KANK3Q6NY19 840 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 CCDC148Q8NFR7 591 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 ATRIPQ8WXE1 791 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 RNF26Q9BY78 433 aaPredicted RBP13.11□□□□□ -0.31
DDR1-227ENST00000376570 XDHP47989 1333 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 GRAPQ13588 217 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 GRAPLQ8TC17 118 aaPredicted RBP13.11□□□□□ -0.31
DDR1-227ENST00000376570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.11□□□□□ -0.31
DDR1-227ENST00000376570 NOC4LQ9BVI4 516 aaKnown RBP13.11□□□□□ -0.31
DDR1-227ENST00000376570 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.11□□□□□ -0.31
DDR1-227ENST00000376570 PPP2R2CQ9Y2T4 447 aa13.11□□□□□ -0.31
DDR1-227ENST00000376570 A0A087X0B3 334 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 C21orf2O43822 256 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 NOP2P46087 812 aaKnown RBP13.1□□□□□ -0.31
DDR1-227ENST00000376570 MORC3Q14149 939 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 CCDC181Q5TID7 509 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 FBXO2Q9UK22 296 aaPredicted RBP13.1□□□□□ -0.31
DDR1-227ENST00000376570 TDP2O95551 362 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 CCDC175P0C221 793 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 PLCG1P19174 1290 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 CALCRLQ16602 461 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 KRT79Q5XKE5 535 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 RIOK1Q9BRS2 568 aaKnown RBP13.1□□□□□ -0.31
DDR1-227ENST00000376570 FOXP1Q9H334 677 aaPredicted RBP13.1□□□□□ -0.31
DDR1-227ENST00000376570 JCADQ9P266 1359 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 KCNJ18B7U540 433 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 PPIP5K2O43314 1243 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 RPN1P04843 607 aaKnown RBP13.1□□□□□ -0.31
DDR1-227ENST00000376570 FCER1AP12319 257 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 LMAN1P49257 510 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 KCNJ12Q14500 433 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
DDR1-227ENST00000376570 TYW1BQ6NUM6 668 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 C2CD5Q86YS7 1000 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 MLKLQ8NB16 471 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
DDR1-227ENST00000376570 ATP8A2Q9NTI2 1148 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
DDR1-227ENST00000376570 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
DDR1-227ENST00000376570 PRPF4BQ13523 1007 aaKnown RBP13.09□□□□□ -0.31
DDR1-227ENST00000376570 ZNF397Q8NF99 534 aaPredicted RBP13.09□□□□□ -0.31
DDR1-227ENST00000376570 THRAP3Q9Y2W1 955 aaKnown RBP13.09□□□□□ -0.31
DDR1-227ENST00000376570 LUC7L2Q9Y383 392 aaKnown RBP13.09□□□□□ -0.31
DDR1-227ENST00000376570 BCL9O00512 1426 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 RIC1Q4ADV7 1423 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 RGPD5Q99666 1765 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 PPEF1O14829 653 aaPredicted RBP13.09□□□□□ -0.31
DDR1-227ENST00000376570 CXCR5P32302 372 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 CCDC122Q5T0U0 273 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.09□□□□□ -0.31
DDR1-227ENST00000376570 SGMS1Q86VZ5 419 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 SPTLC3Q9NUV7 552 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 UTRNP46939 3433 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 SETD1AO15047 1707 aaKnown RBP13.09□□□□□ -0.31
DDR1-227ENST00000376570 FAM205AQ6ZU69 1335 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 PPP6R2O75170 966 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 STAT3P40763 770 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 GNAQP50148 359 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 RBM6P78332 1123 aaKnown RBP13.09□□□□□ -0.31
DDR1-227ENST00000376570 NFIAQ12857 509 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 GPS2Q13227 327 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 RAPGEF1Q13905 1077 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 PTPAQ15257 358 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 SPA17Q15506 151 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 NEK11Q8NG66 645 aa13.09□□□□□ -0.31
DDR1-227ENST00000376570 LRRC4BQ9NT99 713 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms