RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 GPBP1Q86WP2 473 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 VSTM4Q8IW00 320 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 CNBD1Q8NA66 436 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 TUBGCP2Q9BSJ2 902 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 NYXQ9GZU5 481 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 ASIC3Q9UHC3 531 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 CDC23Q9UJX2 597 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 GDAQ9Y2T3 454 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 KLRF2D3W0D1 207 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 E2F4Q16254 413 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 STOX1Q6ZVD7 989 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 CAPS2Q9BXY5 557 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 MTRF1LQ9UGC7 380 aaKnown RBP11.61□□□□□ -0.55
SMG7-201ENST00000347615 SH2B2O14492 632 aaPredicted RBP11.61□□□□□ -0.55
SMG7-201ENST00000347615 FMNL1O95466 1100 aaPredicted RBP11.61□□□□□ -0.55
SMG7-201ENST00000347615 CYP2E1P05181 493 aaPredicted RBP11.61□□□□□ -0.55
SMG7-201ENST00000347615 DESP17661 470 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 ADD2P35612 726 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 SLC16A2P36021 539 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 PRR16Q569H4 304 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 CCDC105Q8IYK2 499 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 TBC1D31Q96DN5 1066 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 ANKRD2Q9GZV1 360 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 PTPN22Q9Y2R2 807 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 PREX2Q70Z35 1606 aa11.61□□□□□ -0.55
SMG7-201ENST00000347615 CDC27P30260 824 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 ACTN2P35609 894 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 SLC1A4P43007 532 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 MRPL12P52815 198 aaKnown RBP11.6□□□□□ -0.55
SMG7-201ENST00000347615 WHAMMP3Q1A5X7 153 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 NUP58Q9BVL2 599 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 MMP1P03956 469 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 HDAC6Q9UBN7 1215 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.6□□□□□ -0.55
SMG7-201ENST00000347615 RRP15Q9Y3B9 282 aaKnown RBP11.6□□□□□ -0.55
SMG7-201ENST00000347615 BACH1O14867 736 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 TEX33O43247 280 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 SNAP25P60880 206 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 GTF2IP78347 998 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 DPP8Q6V1X1 898 aaPredicted RBP11.6□□□□□ -0.55
SMG7-201ENST00000347615 TMEM87AQ8NBN3 555 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 PPM1EQ8WY54 764 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 CUL4BQ13620 913 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 HLFQ16534 295 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 MEIS1O00470 390 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 KRIT1O00522 736 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 ARMCX5Q6P1M9 558 aa11.6□□□□□ -0.55
SMG7-201ENST00000347615 USP17L3A6NCW0 530 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 USP17L4A6NCW7 530 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 EXOC3O60645 756 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 PPP6R2O75170 966 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 PRKG1Q13976 671 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 DOK7Q18PE1 504 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 SMIM5Q71RC9 77 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 USP17L1Q7RTZ2 530 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 PAGE5Q96GU1 130 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 CCNL1Q9UK58 526 aaPredicted RBP11.59□□□□□ -0.55
SMG7-201ENST00000347615 CLASP1Q7Z460 1538 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 USP17L8P0C7I0 530 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 IFNAR2P48551 515 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 PAK2Q13177 524 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 SF3B2Q13435 895 aaKnown RBP11.59□□□□□ -0.55
SMG7-201ENST00000347615 TERF2Q15554 542 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 PANK4Q9NVE7 773 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 MAP3K4Q9Y6R4 1608 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 RPL13P26373 211 aaKnown RBP11.59□□□□□ -0.55
SMG7-201ENST00000347615 SCARF1Q14162 830 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 B4GALNT4Q76KP1 1039 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 GJA10Q969M2 543 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 PLVAPQ9BX97 442 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 TRAPPC3LQ5T215 181 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 PPP1R21Q6ZMI0 780 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 ARFGAP2Q8N6H7 521 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 COA7Q96BR5 231 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 PPP1R12CQ9BZL4 782 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 EPB41L5Q9HCM4 733 aa11.59□□□□□ -0.55
SMG7-201ENST00000347615 THRAP3Q9Y2W1 955 aaKnown RBP11.59□□□□□ -0.55
SMG7-201ENST00000347615 GUCY1A2P33402 732 aa11.58□□□□□ -0.55
SMG7-201ENST00000347615 CLNS1AP54105 237 aaKnown RBP11.58□□□□□ -0.55
SMG7-201ENST00000347615 KRT25Q7Z3Z0 450 aa11.58□□□□□ -0.55
SMG7-201ENST00000347615 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.56
SMG7-201ENST00000347615 KCTD1Q719H9 257 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 ARHGEF25Q86VW2 580 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 RABGGTAQ92696 567 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 KIFC2Q96AC6 838 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 CCDC77Q9BR77 488 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 DNM3Q9UQ16 869 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 RPSAP08865 295 aaKnown RBP11.58□□□□□ -0.56
SMG7-201ENST00000347615 SPICE1Q8N0Z3 855 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 PCCAP05165 728 aaPredicted RBP11.58□□□□□ -0.56
SMG7-201ENST00000347615 CYP2D6P10635 497 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 ZNF131P52739 623 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 RASGRF1Q13972 1273 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 USP17L2Q6R6M4 530 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 FMR1NBQ8N0W7 255 aaPredicted RBP11.58□□□□□ -0.56
SMG7-201ENST00000347615 CEP63Q96MT8 703 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 ATP7BP35670 1465 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 CLIC2O15247 247 aa11.58□□□□□ -0.56
SMG7-201ENST00000347615 CALUO43852 315 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms