RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 ZSCAN12O43309 604 aa15.31■□□□□ 0.04
SRRM1-201ENST00000323848 MRPL12P52815 198 aaKnown RBP15.31■□□□□ 0.04
SRRM1-201ENST00000323848 CUL4BQ13620 913 aa15.31■□□□□ 0.04
SRRM1-201ENST00000323848 METTL16Q86W50 562 aaKnown RBP15.31■□□□□ 0.04
SRRM1-201ENST00000323848 CAPZA3Q96KX2 299 aa15.31■□□□□ 0.04
SRRM1-201ENST00000323848 POTEMA6NI47 508 aa15.31■□□□□ 0.04
SRRM1-201ENST00000323848 TRAF5O00463 557 aa15.31■□□□□ 0.04
SRRM1-201ENST00000323848 SEPT2Q15019 361 aa15.31■□□□□ 0.04
SRRM1-201ENST00000323848 SLFN13Q68D06 897 aa15.31■□□□□ 0.04
SRRM1-201ENST00000323848 KIAA1524Q8TCG1 905 aa15.31■□□□□ 0.04
SRRM1-201ENST00000323848 KCNF1Q9H3M0 494 aa15.31■□□□□ 0.04
SRRM1-201ENST00000323848 TACC3Q9Y6A5 838 aa15.31■□□□□ 0.04
SRRM1-201ENST00000323848 RFX7Q2KHR2 1363 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 PPP6R2O75170 966 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 AMPD3Q01432 767 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 COL23A1Q86Y22 540 aaPredicted RBP15.3■□□□□ 0.04
SRRM1-201ENST00000323848 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.3■□□□□ 0.041e-6■■■■■ 31.8
SRRM1-201ENST00000323848 HDAC9Q9UKV0 1011 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 DAGLAQ9Y4D2 1042 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 POLR3GO15318 223 aaPredicted RBP15.3■□□□□ 0.04
SRRM1-201ENST00000323848 KIF5CO60282 957 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 TBC1D8BQ0IIM8 1120 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 TROAPQ12815 778 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 MLKLQ8NB16 471 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 FAM207AQ9NSI2 230 aaPredicted RBP15.3■□□□□ 0.04
SRRM1-201ENST00000323848 PTPREP23469 700 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 KRT9P35527 623 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 PAK1Q13153 545 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 NTRK3Q16288 839 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 AXDND1Q5T1B0 1012 aaPredicted RBP15.3■□□□□ 0.04
SRRM1-201ENST00000323848 SLF1Q9BQI6 1058 aa15.3■□□□□ 0.04
SRRM1-201ENST00000323848 USP17L10C9JJH3 530 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 AKR1B10O60218 316 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 ZNF500O60304 480 aaPredicted RBP15.29■□□□□ 0.04
SRRM1-201ENST00000323848 HERC4Q5GLZ8 1057 aaPredicted RBP15.29■□□□□ 0.04
SRRM1-201ENST00000323848 ZNF569Q5MCW4 686 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 ZFYVE27Q5T4F4 411 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 RDH13Q8NBN7 331 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 FERMT2Q96AC1 680 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 KANSL2Q9H9L4 492 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 GH2P01242 217 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 NSMFQ6X4W1 530 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 SV2BQ7L1I2 683 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 NEK8Q86SG6 692 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 TNNT3P45378 269 aaPredicted RBP15.29■□□□□ 0.04
SRRM1-201ENST00000323848 TOB1P50616 345 aaPredicted RBP15.29■□□□□ 0.04
SRRM1-201ENST00000323848 TMEM132AQ24JP5 1023 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 PRAMEF18Q5VWM3 479 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 DHX40Q8IX18 779 aaKnown RBP15.29■□□□□ 0.04
SRRM1-201ENST00000323848 PCDHA4Q9UN74 947 aa15.29■□□□□ 0.04
SRRM1-201ENST00000323848 CRKP46108 304 aa15.28■□□□□ 0.04
SRRM1-201ENST00000323848 RNASE9P60153 205 aaKnown RBP15.28■□□□□ 0.04
SRRM1-201ENST00000323848 DDR1Q08345 913 aa15.28■□□□□ 0.04
SRRM1-201ENST00000323848 SRPRBQ9Y5M8 271 aaKnown RBP15.28■□□□□ 0.04
SRRM1-201ENST00000323848 MACROD2A1Z1Q3 448 aa15.28■□□□□ 0.04
SRRM1-201ENST00000323848 DCAF17Q5H9S7 520 aaPredicted RBP15.28■□□□□ 0.04
SRRM1-201ENST00000323848 RESP18Q5W5W9 173 aa15.28■□□□□ 0.04
SRRM1-201ENST00000323848 PAGE5Q96GU1 130 aa15.28■□□□□ 0.04
SRRM1-201ENST00000323848 NLRC4Q9NPP4 1024 aa15.28■□□□□ 0.04
SRRM1-201ENST00000323848 U2AF2P26368 475 aaKnown RBP eCLIP15.28■□□□□ 0.041e-9■■■■□ 23.1
SRRM1-201ENST00000323848 RBM6P78332 1123 aaKnown RBP15.28■□□□□ 0.04
SRRM1-201ENST00000323848 PPP2R5BQ15173 497 aa15.28■□□□□ 0.04
SRRM1-201ENST00000323848 ZNF512BQ96KM6 892 aaPredicted RBP15.28■□□□□ 0.04
SRRM1-201ENST00000323848 RMND1Q9NWS8 449 aa15.28■□□□□ 0.04
SRRM1-201ENST00000323848 OR52Z1P0C646 297 aa15.27■□□□□ 0.04
SRRM1-201ENST00000323848 MYCLP12524 364 aaPredicted RBP15.27■□□□□ 0.04
SRRM1-201ENST00000323848 IQCB1Q15051 598 aa15.27■□□□□ 0.04
SRRM1-201ENST00000323848 ELF2Q15723 593 aa15.27■□□□□ 0.04
SRRM1-201ENST00000323848 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.04
SRRM1-201ENST00000323848 JADE2Q9NQC1 790 aa15.27■□□□□ 0.04
SRRM1-201ENST00000323848 FLT1P17948 1338 aa15.27■□□□□ 0.04
SRRM1-201ENST00000323848 ERICH4A6NGS2 130 aa15.27■□□□□ 0.04
SRRM1-201ENST00000323848 AKR1B15C9JRZ8 316 aaPredicted RBP15.27■□□□□ 0.04
SRRM1-201ENST00000323848 ABCB5Q2M3G0 1257 aa15.27■□□□□ 0.04
SRRM1-201ENST00000323848 SLC30A10Q6XR72 485 aa15.27■□□□□ 0.04
SRRM1-201ENST00000323848 NOC4LQ9BVI4 516 aaKnown RBP15.27■□□□□ 0.04
SRRM1-201ENST00000323848 PCDHA12Q9UN75 941 aa15.27■□□□□ 0.04
SRRM1-201ENST00000323848 RGPD1P0DJD0 1748 aa15.27■□□□□ 0.04
SRRM1-201ENST00000323848 TEX33O43247 280 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 FMR1Q06787 632 aaKnown RBP eCLIP15.27■□□□□ 0.031e-6■■□□□ 12
SRRM1-201ENST00000323848 RC3H1Q5TC82 1133 aaKnown RBP15.27■□□□□ 0.03
SRRM1-201ENST00000323848 SYCP3Q8IZU3 236 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 ENGASEQ8NFI3 743 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 TSG101Q99816 390 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 SH2D3AQ9BRG2 576 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 ARGLU1Q9NWB6 273 aaPredicted RBP15.27■□□□□ 0.03
SRRM1-201ENST00000323848 CNTNAP4Q9C0A0 1308 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 TDP2O95551 362 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 NPR1P16066 1061 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 RASA1P20936 1047 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 MCM6Q14566 821 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 KRT25Q7Z3Z0 450 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 ANKRD13CQ8N6S4 541 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 CARD6Q9BX69 1037 aa15.27■□□□□ 0.03
SRRM1-201ENST00000323848 ZNF215Q9UL58 517 aaPredicted RBP15.27■□□□□ 0.03
SRRM1-201ENST00000323848 ECE2O60344 883 aa15.26■□□□□ 0.03
SRRM1-201ENST00000323848 RPN1P04843 607 aaKnown RBP15.26■□□□□ 0.03
SRRM1-201ENST00000323848 PLCG1P19174 1290 aa15.26■□□□□ 0.03
SRRM1-201ENST00000323848 SPA17Q15506 151 aa15.26■□□□□ 0.03
SRRM1-201ENST00000323848 EZH2Q15910 746 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms