RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 TXLNGQ9NUQ3 528 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 MYH13Q9UKX3 1938 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 PECAM1P16284 738 aaPredicted RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 MCM7P33993 719 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 PLCB3Q01970 1234 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 CDC37L1Q7L3B6 337 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 CDC23Q9UJX2 597 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 CDC42BPAQ5VT25 1732 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 CTCFP49711 727 aaPredicted RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 TUBA8Q9NY65 449 aaPredicted RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 CACNA1CQ13936 2221 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 TXNDC9O14530 226 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 STMN1P16949 149 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 ERCC5P28715 1186 aaPredicted RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 INAQ16352 499 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 ASIC2Q16515 512 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 IFIH1Q9BYX4 1025 aaKnown RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 MAP3K7O43318 606 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 BASP1P80723 227 aaKnown RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 AFAP1L2Q8N4X5 818 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 FAM81AQ8TBF8 368 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 KLHL14Q9P2G3 628 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 SERPINA10Q9UK55 444 aa6.26□□□□□ -1.41
VCAN-201ENST00000265077 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.26□□□□□ -1.41
VCAN-201ENST00000265077 MAFGO15525 162 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 MTX1Q13505 466 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 FAM133BQ5BKY9 247 aaKnown RBP6.25□□□□□ -1.41
VCAN-201ENST00000265077 APBB1IPQ7Z5R6 666 aaPredicted RBP6.25□□□□□ -1.41
VCAN-201ENST00000265077 CASP10Q92851 521 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 MYH1P12882 1939 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 MYH2Q9UKX2 1941 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 MYH4Q9Y623 1939 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 ARHGEF10O15013 1369 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 TTC37Q6PGP7 1564 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 CFAP73A6NFT4 308 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 SPOPO43791 374 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 SUN1O94901 812 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 PARP1P09874 1014 aaKnown RBP6.25□□□□□ -1.41
VCAN-201ENST00000265077 GFAPP14136 432 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 ALS2CLQ60I27 953 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 TSPYL6Q8N831 410 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 CHL1O00533 1208 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 PUM3Q15397 648 aaKnown RBP6.25□□□□□ -1.41
VCAN-201ENST00000265077 VPS52Q8N1B4 723 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 FAM167BQ9BTA0 163 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 TPCN1Q9ULQ1 816 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 PPP2R2CQ9Y2T4 447 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 LAMC1P11047 1609 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 ABCC4O15439 1325 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 IQCA1LA6NCM1 817 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 SNX16P57768 344 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 CCDC68Q9H2F9 335 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 ATP7AQ04656 1500 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 TMEM110-MUSTN1A8MSY1 372 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 SASH1O94885 1247 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 IRX4P78413 519 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 TTC38Q5R3I4 469 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 GABPB2Q8TAK5 448 aaPredicted RBP6.25□□□□□ -1.41
VCAN-201ENST00000265077 CD248Q9HCU0 757 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 PTPRTO14522 1441 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 STK10O94804 968 aaKnown RBP6.25□□□□□ -1.41
VCAN-201ENST00000265077 ZNF804AQ7Z570 1209 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 ANKRD2Q9GZV1 360 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 DDX21Q9NR30 783 aaKnown RBP eCLIP6.25□□□□□ -1.41
VCAN-201ENST00000265077 FOXO3O43524 673 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 ANXA1P04083 346 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 APPBP2Q92624 585 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 DSCC1Q9BVC3 393 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 NYXQ9GZU5 481 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 EXOC5O00471 708 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 RPS6KA1Q15418 735 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 WDR44Q5JSH3 913 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 CADPS2Q86UW7 1296 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 PFDN4Q9NQP4 134 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 TNNI3KQ59H18 835 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 NELFBQ8WX92 580 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 XPO4Q9C0E2 1151 aaKnown RBP6.25□□□□□ -1.41
VCAN-201ENST00000265077 MAGEF1Q9HAY2 307 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 EXOC7Q9UPT5 735 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 FPGT-TNNI3KV9GXZ4 949 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 MRPS35P82673 323 aaKnown RBP6.25□□□□□ -1.41
VCAN-201ENST00000265077 SFMBT2Q5VUG0 894 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 HVCN1Q96D96 273 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 TNRQ92752 1358 aa6.25□□□□□ -1.41
VCAN-201ENST00000265077 RGS16O15492 202 aaPredicted RBP6.24□□□□□ -1.41
VCAN-201ENST00000265077 MYSM1Q5VVJ2 828 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 CNOT10Q9H9A5 744 aaKnown RBP6.24□□□□□ -1.41
VCAN-201ENST00000265077 MCM9Q9NXL9 1143 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 NRBP1Q9UHY1 535 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 SMTNP53814 917 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 MAP3K21Q5TCX8 1036 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 CHST3Q7LGC8 479 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 NUF2Q9BZD4 464 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 ZFATQ9P243 1243 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 MTMR6Q9Y217 621 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 CNGA1P29973 690 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 TPD52P55327 224 aaPredicted RBP6.24□□□□□ -1.41
VCAN-201ENST00000265077 TRPC3Q13507 836 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 KRT71Q3SY84 523 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms