RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Gm15023L7MUB4 467 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Nfatc2ipO09130 412 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Ccdc189Q6NZQ0 333 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Als2cr12Q8BVM7 383 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Cdk8Q8R3L8 464 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 MycbpQ9EQS3 103 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Scg2Q03517 617 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Hgh1Q8C3I8 393 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Nlrp5Q9R1M5 1163 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Ccng2O08918 344 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Alppl2P24823 529 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Kiaa1468Q148V7 1216 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Sh3d21Q7TSG5 549 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Kiaa1524Q8BWY9 907 aa16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Yars2Q8BYL4 472 aaKnown RBP16.8■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Map3k15A2AQW0 1331 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Frmd7A2AD83 703 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Bpifb4A2BGH0 617 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Tubb2aQ7TMM9 445 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Prdm4Q80V63 803 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 TxlnbQ8VBT1 685 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Pcdha7Q91Y13 937 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Tubb2bQ9CWF2 445 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Mon2Q80TL7 1715 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 DccP70211 1447 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Mcm5P49718 733 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Asic3Q6X1Y6 530 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Krt222Q8CCX5 294 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Otud7bB2RUR8 840 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Parp1P11103 1013 aaKnown RBP16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Llgl2Q3TJ91 1027 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Trappc10Q3TLI0 1259 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Recql4Q75NR7 1216 aaKnown RBP16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Spata32Q8C5V0 334 aa16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Prdm2A2A7B5 1709 aaKnown RBP16.79■□□□□ 0.28
Scaf4-201ENSMUST00000039280 NfixP70257 488 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Mum1l1Q4VA55 681 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Herc4Q6PAV2 1057 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Kif2bQ8C0N1 668 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Sipa1l2Q80TE4 1722 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Tada3Q8R0L9 432 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Bst2Q8R2Q8 172 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Kif17Q99PW8 1038 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Olfr247E9PVJ7 320 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Olfr819K7N727 320 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Pdrg1P59048 133 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Spata5Q3UMC0 893 aaKnown RBP16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Glra4Q61603 456 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Ribc1Q9D0B8 379 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Tmem47Q9JJG6 181 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Fbxl16A2RT62 479 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Npy5rO70342 466 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Kctd1Q5M956 257 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Matr3Q8K310 846 aaKnown RBP16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 MbipQ99LQ1 341 aa16.78■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Tcerg1lQ3B807 590 aa16.77■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Ica1lQ3TY65 431 aa16.77■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Fam196bQ6GQV1 535 aa16.77■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Rexo1Q7TT28 1213 aa16.77■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Prpf40bQ80W14 870 aa16.77■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Cdc23Q8BGZ4 597 aa16.77■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Cep85Q8BMK0 761 aa16.77■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Ifih1Q8R5F7 1025 aa16.77■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Pcdhgc5Q91XW9 944 aa16.77■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Pdcd6ipQ9WU78 869 aaKnown RBP16.77■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Tulp1Q9Z273 543 aa16.77■□□□□ 0.28
Scaf4-201ENSMUST00000039280 Cacnb3P54285 484 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Tspyl3Q3UYP3 334 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Ccdc42Q5SV66 316 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Galnt17Q7TT15 598 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 PaoxQ8C0L6 504 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Riox2Q8CD15 465 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Lrit1Q8K099 624 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 MypopQ8R4U1 393 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Rab3il1Q8VDV3 383 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Shank2Q80Z38 1476 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 ByslO54825 436 aaKnown RBP16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Zfp781Q0P5U5 243 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Slc9a1Q61165 820 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Tmem191cQ9JJB1 302 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Plcb1Q9Z1B3 1216 aa16.77■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Ube3aO08759 870 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Mdh1P14152 334 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Rbm12b2Q66JV4 834 aaKnown RBP16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 GnptabQ69ZN6 1235 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Clec16aQ80U30 1036 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Mxd3Q80US8 206 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Klhl40Q9D783 621 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Stag2O35638 1231 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Nr1i2O54915 431 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 H2afxP27661 143 aaKnown RBP16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Rad23aP54726 363 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Plekhf1Q3TB82 279 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Usp49Q6P9L4 685 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Wdr19Q3UGF1 1341 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Krt78E9Q0F0 1068 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Grem2O88273 168 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Myo1aO88329 1043 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Ppp1r7Q3UM45 361 aa16.76■□□□□ 0.27
Scaf4-201ENSMUST00000039280 Clul1Q3ZRW6 464 aa16.76■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms