RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 IntuQ059U7 942 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Arhgap44Q5SSM3 814 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ift20Q61025 132 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Bbs9Q811G0 885 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Spata2Q8K004 515 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 PigoQ9JJI6 1093 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Cacna2d3Q9Z1L5 1091 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Gli3Q61602 1583 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Cdc27A2A6Q5 825 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 CrklP47941 303 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Atp8a1P70704 1164 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ezh2Q61188 746 aaKnown RBP11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Irak1Q62406 710 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Slc51bQ80WK2 128 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Hook3Q8BUK6 718 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 LpxnQ99N69 386 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Golph3Q9CRA5 298 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Popdc2Q9ES82 367 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ahnak2E9PYB0 1738 aaKnown RBP11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Usp42B2RQC2 1324 aaKnown RBP11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Zbtb7aO88939 569 aaKnown RBP11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Gas8Q60779 478 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Rnf41Q8BH75 317 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Spice1Q8C804 860 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Mfap3Q922T2 349 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Dhx58Q99J87 678 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Filip1Q9CS72 1211 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Fam213aQ9CYH2 218 aa11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Hic2Q9JLZ6 619 aaKnown RBP11.83□□□□□ -0.52
Rnf40-201ENSMUST00000033088 MthfslL7N466 203 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 TsksO54887 585 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Krt19P19001 403 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Tnnc1P19123 161 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Sox13Q04891 613 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Serpinb13Q8CDC0 389 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Atad2Q8CDM1 1040 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Mtmr6Q8VE11 617 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Hsf2bpQ9D4G2 338 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Rapgef4Q9EQZ6 1011 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Vnn1Q9Z0K8 512 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Atf5O70191 283 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Usp53P15975 1069 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Rps6ka1P18653 724 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Sf3b2Q3UJB0 878 aaKnown RBP11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Gm5935Q497S0 212 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ccnl1Q52KE7 532 aaKnown RBP11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ccdc157Q5SPX1 718 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Creb3l3Q91XE9 479 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Creld2Q9CYA0 350 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 IcoslgQ9JHJ8 322 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Abcc12Q80WJ6 1366 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Atp10bB1AWN4 1474 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ppp1r9aH3BJD6 1292 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 MlxipQ2VPU4 917 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Zmym1Q3TJB1 983 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Clul1Q3ZRW6 464 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Cacna2d4Q5RJF7 1116 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Slc27a1Q60714 646 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 B4galnt4Q766D5 1034 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Yars2Q8BYL4 472 aaKnown RBP11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 AdpgkQ8VDL4 496 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Riok1Q922Q2 567 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Fam173bQ9D1Z3 247 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Pex3Q9QXY9 372 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Mst1rQ62190 1378 aa11.82□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ccdc152E9PX14 254 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Kif5cP28738 956 aaKnown RBP11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Plcb3P51432 1234 aaKnown RBP11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Nr1d1Q3UV55 615 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Krt12Q64291 487 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Rcn2Q8BP92 320 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Alg3Q8K2A8 438 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Atp6v0a4Q920R6 833 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Cep83Q9D5R3 692 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 ParvgQ9ERD8 331 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Snx1Q9WV80 522 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Col15a1O35206 1367 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 E9QMW4 1145 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Chil3O35744 398 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Pdha1P35486 390 aaKnown RBP11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Traf3ip1Q149C2 625 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Kif22Q3V300 660 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ehbp1Q69ZW3 1231 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Gigyf2Q6Y7W8 1291 aaKnown RBP11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Pak2Q8CIN4 524 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Mfap3lQ9D3X9 409 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Txnrd1Q9JMH6 613 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Mast3Q3U214 1321 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Hnrnph1O35737 449 aaKnown RBP11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Nek1P51954 1203 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Spout1Q3UHX9 385 aaKnown RBP11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Kif5bQ61768 963 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Tor4aQ8BH02 426 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Bpifb6Q8BU51 449 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Leng8Q8CBY3 785 aaKnown RBP11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Sugp2Q8CH09 1067 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Dact1Q8R4A3 778 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Mxra7Q9CZH7 178 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Rsrc1Q9DBU6 334 aa11.81□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Nup153E9Q3G8 1462 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms