RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 RSF1Q05043 376 aa2.79□□□□□ -1.96
snR54snR54 CIA1Q05583 330 aa2.79□□□□□ -1.96
snR54snR54 RRP6Q12149 733 aaKnown RBP2.79□□□□□ -1.96
snR54snR54 CSR2Q12734 1121 aa2.79□□□□□ -1.96
snR54snR54 ATP4P05626 244 aa2.78□□□□□ -1.96
snR54snR54 TPK1P06244 397 aa2.78□□□□□ -1.96
snR54snR54 YML002WP0CF17 737 aa2.78□□□□□ -1.96
snR54snR54 PHO81P17442 1178 aa2.78□□□□□ -1.96
snR54snR54 RPB8P20436 146 aa2.78□□□□□ -1.96
snR54snR54 RPN2P32565 945 aaKnown RBP2.78□□□□□ -1.96
snR54snR54 RIM2P38127 377 aa2.78□□□□□ -1.96
snR54snR54 SEC31P38968 1273 aaKnown RBP2.78□□□□□ -1.96
snR54snR54 DHH1P39517 506 aaKnown RBP2.78□□□□□ -1.96
snR54snR54 YIL060WP40519 144 aa2.78□□□□□ -1.96
snR54snR54 FAF1P40546 346 aaPredicted RBP2.78□□□□□ -1.96
snR54snR54 AZF1P41696 914 aa2.78□□□□□ -1.96
snR54snR54 IAH1P41734 238 aa2.78□□□□□ -1.96
snR54snR54 DAP1Q12091 152 aa2.78□□□□□ -1.96
snR54snR54 PMS1P14242 873 aa2.77□□□□□ -1.97
snR54snR54 PDA1P16387 420 aaKnown RBP2.77□□□□□ -1.97
snR54snR54 GLN3P18494 730 aa2.77□□□□□ -1.97
snR54snR54 SRB5P32585 307 aa2.77□□□□□ -1.97
snR54snR54 KRE9P39005 276 aa2.77□□□□□ -1.97
snR54snR54 YIR014WP40570 242 aa2.77□□□□□ -1.97
snR54snR54 PKP2P53170 491 aa2.77□□□□□ -1.97
snR54snR54 NUC1P08466 329 aa2.76□□□□□ -1.97
snR54snR54 KRS1P15180 591 aaKnown RBP2.76□□□□□ -1.97
snR54snR54 MSM1P22438 575 aa2.76□□□□□ -1.97
snR54snR54 YOX1P34161 385 aa2.76□□□□□ -1.97
snR54snR54 ESL2P36168 1195 aa2.76□□□□□ -1.97
snR54snR54 MRPL36P36531 177 aa2.76□□□□□ -1.97
snR54snR54 NPR3P38742 1146 aa2.76□□□□□ -1.97
snR54snR54 ACA1P39970 489 aa2.76□□□□□ -1.97
snR54snR54 YNR061CP53747 219 aa2.76□□□□□ -1.97
snR54snR54 REG1Q00816 1014 aa2.76□□□□□ -1.97
snR54snR54 NUP100Q02629 959 aa2.76□□□□□ -1.97
snR54snR54 YOL057WQ08225 711 aa2.76□□□□□ -1.97
snR54snR54 PGI1P12709 554 aaKnown RBP2.75□□□□□ -1.97
snR54snR54 NOP1P15646 327 aaKnown RBP2.75□□□□□ -1.97
snR54snR54 GID7P25569 745 aa2.75□□□□□ -1.97
snR54snR54 TFC3P34111 1160 aa2.75□□□□□ -1.97
snR54snR54 ERG7P38604 731 aa2.75□□□□□ -1.97
snR54snR54 PSD1P39006 500 aa2.75□□□□□ -1.97
snR54snR54 PFK26P40433 827 aaKnown RBP2.75□□□□□ -1.97
snR54snR54 RRT6P53117 311 aaPredicted RBP2.75□□□□□ -1.97
snR54snR54 NNF2P53253 936 aa2.75□□□□□ -1.97
snR54snR54 TFC6Q06339 672 aa2.75□□□□□ -1.97
snR54snR54 YOR019WQ99248 730 aa2.75□□□□□ -1.97
snR54snR54 VCX1Q99385 411 aa2.75□□□□□ -1.97
snR54snR54 MTF2P10849 440 aa2.74□□□□□ -1.97
snR54snR54 UBC1P21734 215 aaKnown RBP2.74□□□□□ -1.97
snR54snR54 ARP1P38696 384 aa2.74□□□□□ -1.97
snR54snR54 RPN11P43588 306 aaKnown RBP2.74□□□□□ -1.97
snR54snR54 CTF18P49956 741 aa2.74□□□□□ -1.97
snR54snR54 IMP4P53941 290 aaKnown RBP2.74□□□□□ -1.97
snR54snR54 MRPL13Q02204 264 aa2.74□□□□□ -1.97
snR54snR54 TMA64Q04600 565 aaKnown RBP2.74□□□□□ -1.97
snR54snR54 ADE13Q05911 482 aaKnown RBP2.74□□□□□ -1.97
snR54snR54 CSR1Q06705 408 aaKnown RBP2.74□□□□□ -1.97
snR54snR54 ATG9Q12142 997 aa2.74□□□□□ -1.97
snR54snR54 YBR298C-AQ8TGK4 73 aa2.74□□□□□ -1.97
snR54snR54 PRP16P15938 1071 aaPredicted RBP2.73□□□□□ -1.97
snR54snR54 ERG8P24521 451 aa2.73□□□□□ -1.97
snR54snR54 PRO3P32263 286 aaKnown RBP2.73□□□□□ -1.97
snR54snR54 MIA40P36046 403 aa2.73□□□□□ -1.97
snR54snR54 SDS24P38314 527 aa2.73□□□□□ -1.97
snR54snR54 PHO90P39535 881 aa2.73□□□□□ -1.97
snR54snR54 IST3P40565 148 aaPredicted RBP2.73□□□□□ -1.97
snR54snR54 GUF1P46943 645 aa2.73□□□□□ -1.97
snR54snR54 HXK2P04807 486 aaKnown RBP2.72□□□□□ -1.97
snR54snR54 MRS3P10566 314 aa2.72□□□□□ -1.97
snR54snR54 GAC1P28006 793 aa2.72□□□□□ -1.97
snR54snR54 MCM4P30665 933 aaKnown RBP2.72□□□□□ -1.97
snR54snR54 RAD16P31244 790 aa2.72□□□□□ -1.97
snR54snR54 ERG1P32476 496 aaKnown RBP2.72□□□□□ -1.97
snR54snR54 YBR139WP38109 508 aa2.72□□□□□ -1.97
snR54snR54 RTS1P38903 757 aa2.72□□□□□ -1.97
snR54snR54 YER130CP39959 443 aa2.72□□□□□ -1.97
snR54snR54 PKP1P40530 394 aa2.72□□□□□ -1.97
snR54snR54 IST1P53843 298 aaPredicted RBP2.72□□□□□ -1.97
snR54snR54 YMR178WQ03219 274 aaKnown RBP2.72□□□□□ -1.97
snR54snR54 BLS1Q06071 122 aa2.72□□□□□ -1.97
snR54snR54 ATG26Q06321 1198 aa2.72□□□□□ -1.97
snR54snR54 PSK2Q08217 1101 aa2.72□□□□□ -1.97
snR54snR54 ERG27Q12452 347 aaKnown RBP2.72□□□□□ -1.97
snR54snR54 LCB1P25045 558 aaKnown RBP2.71□□□□□ -1.98
snR54snR54 PGS1P25578 521 aa2.71□□□□□ -1.98
snR54snR54 PHD1P36093 366 aa2.71□□□□□ -1.98
snR54snR54 ANS1P38832 159 aa2.71□□□□□ -1.98
snR54snR54 RGI2P40188 164 aa2.71□□□□□ -1.98
snR54snR54 YJL068CP40363 299 aa2.71□□□□□ -1.98
snR54snR54 SEC24P40482 926 aaKnown RBP2.71□□□□□ -1.98
snR54snR54 PAP2P53632 584 aaKnown RBP2.71□□□□□ -1.98
snR54snR54 UBX4P54730 416 aa2.71□□□□□ -1.98
snR54snR54 FMP45Q07651 309 aa2.71□□□□□ -1.98
snR54snR54 RDR1Q08904 546 aa2.71□□□□□ -1.98
snR54snR54 CDC15P27636 974 aa2.7□□□□□ -1.98
snR54snR54 DBF20P32328 564 aa2.7□□□□□ -1.98
snR54snR54 MIC60P36112 540 aa2.7□□□□□ -1.98
snR54snR54 SPC34P36131 295 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms