RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 APC2Q12440 853 aa-0.25□□□□□ -2.45
snR38snR38 SFL1P20134 766 aa-0.26□□□□□ -2.45
snR38snR38 SEC62P21825 274 aa-0.26□□□□□ -2.45
snR38snR38 PCL2P25693 308 aa-0.26□□□□□ -2.45
snR38snR38 CMK1P27466 446 aaKnown RBP-0.26□□□□□ -2.45
snR38snR38 SEC65P29478 273 aa-0.26□□□□□ -2.45
snR38snR38 SIP2P34164 415 aaKnown RBP-0.26□□□□□ -2.45
snR38snR38 KTR3P38130 404 aaPredicted RBP-0.26□□□□□ -2.45
snR38snR38 YHR020WP38708 688 aaKnown RBP-0.26□□□□□ -2.45
snR38snR38 YER130CP39959 443 aa-0.26□□□□□ -2.45
snR38snR38 PHM8P40025 321 aa-0.26□□□□□ -2.45
snR38snR38 HXT9P40885 567 aa-0.26□□□□□ -2.45
snR38snR38 RET2P43621 546 aa-0.26□□□□□ -2.45
snR38snR38 NRM1P53718 249 aa-0.26□□□□□ -2.45
snR38snR38 YNL034WP53963 612 aa-0.26□□□□□ -2.45
snR38snR38 ORC1P54784 914 aaPredicted RBP-0.26□□□□□ -2.45
snR38snR38 NUP100Q02629 959 aa-0.26□□□□□ -2.45
snR38snR38 PFA5Q03289 374 aa-0.26□□□□□ -2.45
snR38snR38 SKY1Q03656 742 aa-0.26□□□□□ -2.45
snR38snR38 YDR109CQ04585 715 aa-0.26□□□□□ -2.45
snR38snR38 CRF1Q04930 467 aa-0.26□□□□□ -2.45
snR38snR38 PIN3Q06449 215 aa-0.26□□□□□ -2.45
snR38snR38 ESA1Q08649 445 aa-0.26□□□□□ -2.45
snR38snR38 YBR255C-AQ3E776 120 aa-0.26□□□□□ -2.45
snR38snR38 PSK1P31374 1356 aa-0.27□□□□□ -2.45
snR38snR38 CAR1P00812 333 aaKnown RBP-0.27□□□□□ -2.45
snR38snR38 SAC1P32368 623 aaKnown RBP-0.27□□□□□ -2.45
snR38snR38 YIL067CP40514 678 aa-0.27□□□□□ -2.45
snR38snR38 AXL1P40851 1208 aa-0.27□□□□□ -2.45
snR38snR38 MRPL35Q06678 367 aa-0.27□□□□□ -2.45
snR38snR38 GUD1Q07729 489 aa-0.27□□□□□ -2.45
snR38snR38 SSF2Q12153 453 aaPredicted RBP-0.27□□□□□ -2.45
snR38snR38 COX1P00401 534 aa-0.28□□□□□ -2.45
snR38snR38 YEF3P16521 1044 aaKnown RBP-0.28□□□□□ -2.45
snR38snR38 TKL1P23254 680 aaKnown RBP-0.28□□□□□ -2.45
snR38snR38 PUT3P25502 979 aaPredicted RBP-0.28□□□□□ -2.45
snR38snR38 MRP4P32902 394 aa-0.28□□□□□ -2.45
snR38snR38 PIM1P36775 1133 aa-0.28□□□□□ -2.45
snR38snR38 PHO90P39535 881 aa-0.28□□□□□ -2.45
snR38snR38 EMP65P40085 556 aa-0.28□□□□□ -2.45
snR38snR38 ALG8P40351 577 aa-0.28□□□□□ -2.45
snR38snR38 VID28P40547 921 aa-0.28□□□□□ -2.45
snR38snR38 MKC7P53379 596 aa-0.28□□□□□ -2.45
snR38snR38 HOL1P53389 586 aa-0.28□□□□□ -2.45
snR38snR38 MDG1P53885 366 aa-0.28□□□□□ -2.45
snR38snR38 HRI1Q05905 244 aaKnown RBP-0.28□□□□□ -2.45
snR38snR38 HOS1Q12214 470 aa-0.28□□□□□ -2.45
snR38snR38 VPS5Q92331 675 aa-0.28□□□□□ -2.45
snR38snR38 RAP1P11938 827 aa-0.29□□□□□ -2.46
snR38snR38 HEM15P16622 393 aa-0.29□□□□□ -2.46
snR38snR38 DAL2P25335 343 aa-0.29□□□□□ -2.46
snR38snR38 CYS4P32582 507 aaKnown RBP-0.29□□□□□ -2.46
snR38snR38 EAF5P39995 279 aa-0.29□□□□□ -2.46
snR38snR38 YPL107WQ02873 248 aa-0.29□□□□□ -2.46
snR38snR38 NOP8Q08287 484 aaPredicted RBP-0.29□□□□□ -2.46
snR38snR38 YPR096CO13587 100 aa-0.3□□□□□ -2.46
snR38snR38 MCM3P24279 971 aaKnown RBP-0.3□□□□□ -2.46
snR38snR38 GAC1P28006 793 aa-0.3□□□□□ -2.46
snR38snR38 ECM15P35195 104 aa-0.3□□□□□ -2.46
snR38snR38 SHO1P40073 367 aa-0.3□□□□□ -2.46
snR38snR38 VFA1P40080 203 aa-0.3□□□□□ -2.46
snR38snR38 CRH1P53301 507 aa-0.3□□□□□ -2.46
snR38snR38 SAM50P53969 484 aa-0.3□□□□□ -2.46
snR38snR38 YPR195CQ06594 109 aa-0.3□□□□□ -2.46
snR38snR38 TSR1Q07381 788 aaKnown RBP-0.3□□□□□ -2.46
snR38snR38 RDR1Q08904 546 aa-0.3□□□□□ -2.46
snR38snR38 CDC26P14724 124 aa-0.31□□□□□ -2.46
snR38snR38 CLB2P24869 491 aa-0.31□□□□□ -2.46
snR38snR38 CPR4P25334 318 aa-0.31□□□□□ -2.46
snR38snR38 YPS1P32329 569 aa-0.31□□□□□ -2.46
snR38snR38 TYS1P36421 394 aaKnown RBP-0.31□□□□□ -2.46
snR38snR38 DTR1P38125 572 aa-0.31□□□□□ -2.46
snR38snR38 CHZ1P40019 153 aaPredicted RBP-0.31□□□□□ -2.46
snR38snR38 PAN6P40459 309 aa-0.31□□□□□ -2.46
snR38snR38 YJR085CP47131 105 aaKnown RBP-0.31□□□□□ -2.46
snR38snR38 PTA1Q01329 785 aaPredicted RBP-0.31□□□□□ -2.46
snR38snR38 PLB3Q08108 686 aa-0.31□□□□□ -2.46
snR38snR38 CFT2Q12102 859 aaPredicted RBP-0.31□□□□□ -2.46
snR38snR38 PDH1Q12428 516 aaKnown RBP-0.31□□□□□ -2.46
snR38snR38 MEF1P25039 761 aa-0.32□□□□□ -2.46
snR38snR38 LRE1P25579 583 aaKnown RBP-0.32□□□□□ -2.46
snR38snR38 PRE2P30656 287 aaKnown RBP-0.32□□□□□ -2.46
snR38snR38 SNC1P31109 117 aa-0.32□□□□□ -2.46
snR38snR38 NUP2P32499 720 aa-0.32□□□□□ -2.46
snR38snR38 UTR5P32630 166 aa-0.32□□□□□ -2.46
snR38snR38 YKL091CP33324 310 aaKnown RBP-0.32□□□□□ -2.46
snR38snR38 UBP12P39538 1254 aa-0.32□□□□□ -2.46
snR38snR38 YPL014WQ02606 381 aa-0.32□□□□□ -2.46
snR38snR38 SSK1Q07084 712 aa-0.32□□□□□ -2.46
snR38snR38 THI20Q08224 551 aa-0.32□□□□□ -2.46
snR38snR38 CUE5Q08412 411 aaKnown RBP-0.32□□□□□ -2.46
snR38snR38 CWC2Q12046 339 aaPredicted RBP-0.32□□□□□ -2.46
snR38snR38 BAG7Q12128 409 aa-0.32□□□□□ -2.46
snR38snR38 SGV1P23293 657 aaKnown RBP-0.33□□□□□ -2.46
snR38snR38 OAF3P36023 863 aa-0.33□□□□□ -2.46
snR38snR38 ATG12P38316 186 aa-0.33□□□□□ -2.46
snR38snR38 SRP68P38687 599 aaKnown RBP-0.33□□□□□ -2.46
snR38snR38 CSM2P40465 213 aa-0.33□□□□□ -2.46
snR38snR38 YGR153WP48238 217 aa-0.33□□□□□ -2.46
snR38snR38 RPN14P53196 417 aa-0.33□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms