RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C SER3P40054 469 aa2.21□□□□□ -2.06
ATG11YPR049C SHQ1P40486 507 aaPredicted RBP2.21□□□□□ -2.06
ATG11YPR049C HMI1Q12039 706 aa2.21□□□□□ -2.06
ATG11YPR049C SMC6Q12749 1114 aa2.21□□□□□ -2.06
ATG11YPR049C SAM35P14693 329 aa2.21□□□□□ -2.06
ATG11YPR049C CDC12P32468 407 aaKnown RBP2.21□□□□□ -2.06
ATG11YPR049C PXA2P34230 853 aa2.21□□□□□ -2.06
ATG11YPR049C EMC3P36039 253 aa2.21□□□□□ -2.06
ATG11YPR049C ALY1P36117 915 aa2.21□□□□□ -2.06
ATG11YPR049C UBP6P43593 499 aaKnown RBP2.21□□□□□ -2.06
ATG11YPR049C STB4P50104 949 aa2.21□□□□□ -2.06
ATG11YPR049C MUP1P50276 574 aa2.21□□□□□ -2.06
ATG11YPR049C PCL10P53124 433 aa2.21□□□□□ -2.06
ATG11YPR049C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
ATG11YPR049C LGE1Q02796 332 aaKnown RBP2.21□□□□□ -2.06
ATG11YPR049C YDR338CQ05497 695 aa2.21□□□□□ -2.06
ATG11YPR049C YLR030WQ07967 263 aa2.21□□□□□ -2.06
ATG11YPR049C DBP2P24783 546 aaKnown RBP2.2□□□□□ -2.06
ATG11YPR049C BRF1P29056 596 aa2.2□□□□□ -2.06
ATG11YPR049C YEL1P34225 687 aa2.2□□□□□ -2.06
ATG11YPR049C HSL7P38274 827 aa2.2□□□□□ -2.06
ATG11YPR049C ELO1P39540 310 aa2.2□□□□□ -2.06
ATG11YPR049C YJR054WP47114 497 aa2.2□□□□□ -2.06
ATG11YPR049C LRS4Q04087 347 aaKnown RBP2.2□□□□□ -2.06
ATG11YPR049C RGA2Q06407 1009 aa2.2□□□□□ -2.06
ATG11YPR049C SHS1Q07657 551 aa2.2□□□□□ -2.06
ATG11YPR049C AAD4Q07747 329 aa2.2□□□□□ -2.06
ATG11YPR049C AIM41Q12032 185 aa2.2□□□□□ -2.06
ATG11YPR049C ERG20P08524 352 aaKnown RBP2.2□□□□□ -2.06
ATG11YPR049C YCR006CP25350 157 aa2.2□□□□□ -2.06
ATG11YPR049C GIC1P38785 314 aa2.2□□□□□ -2.06
ATG11YPR049C ULP2P40537 1034 aaPredicted RBP2.2□□□□□ -2.06
ATG11YPR049C GLG2P47011 380 aa2.2□□□□□ -2.06
ATG11YPR049C TOF1P53840 1238 aa2.2□□□□□ -2.06
ATG11YPR049C AQR1P53943 586 aa2.2□□□□□ -2.06
ATG11YPR049C YMR160WQ03823 816 aa2.2□□□□□ -2.06
ATG11YPR049C SND1Q04007 877 aa2.2□□□□□ -2.06
ATG11YPR049C STP3Q05937 343 aa2.2□□□□□ -2.06
ATG11YPR049C YPS7Q06325 596 aa2.2□□□□□ -2.06
ATG11YPR049C RRP15Q06511 250 aaPredicted RBP2.2□□□□□ -2.06
ATG11YPR049C SCO2P38072 301 aa2.2□□□□□ -2.06
ATG11YPR049C YBR053CP38235 358 aa2.2□□□□□ -2.06
ATG11YPR049C PIH1P38768 344 aa2.2□□□□□ -2.06
ATG11YPR049C MTG2P38860 518 aa2.2□□□□□ -2.06
ATG11YPR049C PIG2P40187 538 aa2.2□□□□□ -2.06
ATG11YPR049C PEX25Q02969 394 aa2.2□□□□□ -2.06
ATG11YPR049C RPL22AP05749 121 aaKnown RBP2.19□□□□□ -2.06
ATG11YPR049C HOM3P10869 527 aa2.19□□□□□ -2.06
ATG11YPR049C YSR3P23501 404 aa2.19□□□□□ -2.06
ATG11YPR049C BMH1P29311 267 aaKnown RBP2.19□□□□□ -2.06
ATG11YPR049C STE5P32917 917 aa2.19□□□□□ -2.06
ATG11YPR049C YBR056WP38081 501 aa2.19□□□□□ -2.06
ATG11YPR049C RNR4P49723 345 aaKnown RBP2.19□□□□□ -2.06
ATG11YPR049C AIM14P53109 570 aa2.19□□□□□ -2.06
ATG11YPR049C CBK1P53894 756 aa2.19□□□□□ -2.06
ATG11YPR049C ORC3P54790 616 aa2.19□□□□□ -2.06
ATG11YPR049C VHS1Q03785 461 aa2.19□□□□□ -2.06
ATG11YPR049C NHX1Q04121 633 aa2.19□□□□□ -2.06
ATG11YPR049C HUA2Q12134 243 aa2.19□□□□□ -2.06
ATG11YPR049C SLH1P53327 1967 aaKnown RBP2.19□□□□□ -2.06
ATG11YPR049C KRE6P32486 720 aa2.19□□□□□ -2.06
ATG11YPR049C GPI16P38875 610 aa2.19□□□□□ -2.06
ATG11YPR049C LTP1P40347 161 aa2.19□□□□□ -2.06
ATG11YPR049C CIS3P47001 227 aa2.19□□□□□ -2.06
ATG11YPR049C NBP1P52919 319 aaPredicted RBP2.19□□□□□ -2.06
ATG11YPR049C LCL3P53153 274 aa2.19□□□□□ -2.06
ATG11YPR049C GSF2Q04697 403 aaKnown RBP2.19□□□□□ -2.06
ATG11YPR049C PLB3Q08108 686 aa2.19□□□□□ -2.06
ATG11YPR049C PGA3Q12746 312 aaKnown RBP2.19□□□□□ -2.06
ATG11YPR049C ECM3Q99252 613 aa2.19□□□□□ -2.06
ATG11YPR049C STE12P13574 688 aa2.18□□□□□ -2.06
ATG11YPR049C YCL002CP25565 263 aa2.18□□□□□ -2.06
ATG11YPR049C UBP13P38187 747 aa2.18□□□□□ -2.06
ATG11YPR049C MSE1P48525 536 aa2.18□□□□□ -2.06
ATG11YPR049C HFD1Q04458 532 aa2.18□□□□□ -2.06
ATG11YPR049C YDL073WQ07454 984 aa2.18□□□□□ -2.06
ATG11YPR049C VPS54Q12071 889 aa2.18□□□□□ -2.06
ATG11YPR049C YLR046CQ12253 270 aa2.18□□□□□ -2.06
ATG11YPR049C GEX1P25596 615 aa2.18□□□□□ -2.06
ATG11YPR049C MUD1P32605 298 aaKnown RBP2.18□□□□□ -2.06
ATG11YPR049C GEX2P36173 615 aa2.18□□□□□ -2.06
ATG11YPR049C TAT2P38967 592 aa2.18□□□□□ -2.06
ATG11YPR049C DSN1P40568 576 aa2.18□□□□□ -2.06
ATG11YPR049C VHS3Q08438 674 aa2.18□□□□□ -2.06
ATG11YPR049C YPL216WQ08964 1102 aa2.18□□□□□ -2.06
ATG11YPR049C RGT2Q12300 763 aa2.18□□□□□ -2.06
ATG11YPR049C AI5_ALPHAQ9ZZX1 630 aa2.18□□□□□ -2.06
ATG11YPR049C COX1P00401 534 aa2.18□□□□□ -2.06
ATG11YPR049C MIH1P23748 554 aa2.18□□□□□ -2.06
ATG11YPR049C MPE1P35728 441 aaKnown RBP2.18□□□□□ -2.06
ATG11YPR049C IML3P38265 245 aa2.18□□□□□ -2.06
ATG11YPR049C FAD1P38913 306 aa2.18□□□□□ -2.06
ATG11YPR049C YIL086CP40503 102 aa2.18□□□□□ -2.06
ATG11YPR049C CDC1P40986 491 aa2.18□□□□□ -2.06
ATG11YPR049C PHO86P46956 311 aa2.18□□□□□ -2.06
ATG11YPR049C SMC3P47037 1230 aa2.18□□□□□ -2.06
ATG11YPR049C INP2Q03824 705 aa2.18□□□□□ -2.06
ATG11YPR049C VPS68Q12016 184 aa2.18□□□□□ -2.06
ATG11YPR049C YDL177CQ12257 170 aa2.18□□□□□ -2.06
ATG11YPR049C Q0142Q9ZZW4 58 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms