RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C CYC2P38909 366 aa7.97□□□□□ -1.13
LSP1YPL004C IRR1P40541 1150 aa7.97□□□□□ -1.13
LSP1YPL004C YFR018CP43599 363 aa7.97□□□□□ -1.13
LSP1YPL004C PET130P47065 347 aa7.97□□□□□ -1.13
LSP1YPL004C LSC1P53598 329 aaKnown RBP7.97□□□□□ -1.13
LSP1YPL004C KTR5P53966 522 aaPredicted RBP7.97□□□□□ -1.13
LSP1YPL004C ADE12P80210 433 aaKnown RBP7.97□□□□□ -1.13
LSP1YPL004C SPP2Q02521 185 aa7.97□□□□□ -1.13
LSP1YPL004C CCE1Q03702 353 aa7.97□□□□□ -1.13
LSP1YPL004C ARG7Q04728 441 aa7.97□□□□□ -1.13
LSP1YPL004C YDL129WQ07555 291 aa7.97□□□□□ -1.13
LSP1YPL004C RTT10Q08924 1013 aa7.97□□□□□ -1.13
LSP1YPL004C VPS68Q12016 184 aa7.97□□□□□ -1.13
LSP1YPL004C YOR012WQ12351 137 aa7.97□□□□□ -1.13
LSP1YPL004C ILV2P07342 687 aaKnown RBP7.96□□□□□ -1.14
LSP1YPL004C TUB1P09733 447 aaKnown RBP7.96□□□□□ -1.14
LSP1YPL004C HRR25P29295 494 aaKnown RBP7.96□□□□□ -1.14
LSP1YPL004C TFC3P34111 1160 aa7.96□□□□□ -1.14
LSP1YPL004C GMH1P36125 273 aa7.96□□□□□ -1.14
LSP1YPL004C SPC97P38863 823 aa7.96□□□□□ -1.14
LSP1YPL004C SEC28P40509 296 aaKnown RBP7.96□□□□□ -1.14
LSP1YPL004C DSN1P40568 576 aa7.96□□□□□ -1.14
LSP1YPL004C ZIP2P53061 704 aa7.96□□□□□ -1.14
LSP1YPL004C NPL3Q01560 414 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
LSP1YPL004C TRM82Q03774 444 aa7.96□□□□□ -1.14
LSP1YPL004C YFT2Q06676 274 aa7.96□□□□□ -1.14
LSP1YPL004C YET3Q07451 203 aa7.96□□□□□ -1.14
LSP1YPL004C STE2D6VTK4 431 aa7.95□□□□□ -1.14
LSP1YPL004C SEM1O94742 89 aa7.95□□□□□ -1.14
LSP1YPL004C ILV6P25605 309 aaKnown RBP7.95□□□□□ -1.14
LSP1YPL004C MF(ALPHA)2P32435 120 aa7.95□□□□□ -1.14
LSP1YPL004C LRG1P35688 1017 aa7.95□□□□□ -1.14
LSP1YPL004C MUD2P36084 527 aaKnown RBP7.95□□□□□ -1.14
LSP1YPL004C SET3P36124 751 aa7.95□□□□□ -1.14
LSP1YPL004C UTH1P36135 365 aa7.95□□□□□ -1.14
LSP1YPL004C HAT2P39984 401 aa7.95□□□□□ -1.14
LSP1YPL004C URB2P47108 1174 aa7.95□□□□□ -1.14
LSP1YPL004C BUD32P53323 261 aa7.95□□□□□ -1.14
LSP1YPL004C HST2P53686 357 aa7.95□□□□□ -1.14
LSP1YPL004C SWS2P53937 143 aa7.95□□□□□ -1.14
LSP1YPL004C BUD22Q04347 519 aaKnown RBP7.95□□□□□ -1.14
LSP1YPL004C YLL032CQ07834 825 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
LSP1YPL004C TRM8Q12009 286 aa7.95□□□□□ -1.14
LSP1YPL004C GTT2Q12390 233 aa7.95□□□□□ -1.14
LSP1YPL004C SPS1P08458 490 aa7.94□□□□□ -1.14
LSP1YPL004C SBP1P10080 294 aaKnown RBP7.94□□□□□ -1.14
LSP1YPL004C ABF1P14164 731 aa7.94□□□□□ -1.14
LSP1YPL004C YSR3P23501 404 aa7.94□□□□□ -1.14
LSP1YPL004C PHO3P24031 467 aa7.94□□□□□ -1.14
LSP1YPL004C THI80P35202 319 aa7.94□□□□□ -1.14
LSP1YPL004C UBP14P38237 781 aaKnown RBP7.94□□□□□ -1.14
LSP1YPL004C CCT2P39076 527 aaKnown RBP7.94□□□□□ -1.14
LSP1YPL004C SUM1P46676 1062 aa7.94□□□□□ -1.14
LSP1YPL004C EMI1Q04406 187 aa7.94□□□□□ -1.14
LSP1YPL004C STE23Q06010 1027 aa7.94□□□□□ -1.14
LSP1YPL004C VTA1Q06263 330 aa7.94□□□□□ -1.14
LSP1YPL004C RPN8Q08723 338 aaKnown RBP7.94□□□□□ -1.14
LSP1YPL004C PIN2Q12057 282 aa7.94□□□□□ -1.14
LSP1YPL004C NUS1Q12063 375 aa7.94□□□□□ -1.14
LSP1YPL004C SLP1Q12232 587 aa7.94□□□□□ -1.14
LSP1YPL004C KCS1Q12494 1050 aa7.94□□□□□ -1.14
LSP1YPL004C NHA1Q99271 985 aa7.94□□□□□ -1.14
LSP1YPL004C STT4P37297 1900 aa7.93□□□□□ -1.14
LSP1YPL004C HFA1P32874 2273 aa7.93□□□□□ -1.14
LSP1YPL004C YPR089WO13585 888 aa7.93□□□□□ -1.14
LSP1YPL004C ERG6P25087 383 aaKnown RBP7.93□□□□□ -1.14
LSP1YPL004C GCD11P32481 527 aaKnown RBP7.93□□□□□ -1.14
LSP1YPL004C MUM2P38236 366 aa7.93□□□□□ -1.14
LSP1YPL004C REV7P38927 245 aa7.93□□□□□ -1.14
LSP1YPL004C YIL108WP40483 696 aaKnown RBP7.93□□□□□ -1.14
LSP1YPL004C BIR1P47134 954 aa7.93□□□□□ -1.14
LSP1YPL004C ARP4P80428 489 aa7.93□□□□□ -1.14
LSP1YPL004C OSH6Q02201 448 aa7.93□□□□□ -1.14
LSP1YPL004C USA1Q03714 838 aa7.93□□□□□ -1.14
LSP1YPL004C PLB3Q08108 686 aa7.93□□□□□ -1.14
LSP1YPL004C CSF1Q12150 2958 aa7.93□□□□□ -1.14
LSP1YPL004C ARG4P04076 463 aaPredicted RBP7.92□□□□□ -1.14
LSP1YPL004C RPL40AP0CH08 128 aaKnown RBP7.92□□□□□ -1.14
LSP1YPL004C RPL40BP0CH09 128 aaKnown RBP7.92□□□□□ -1.14
LSP1YPL004C VPS34P22543 875 aa7.92□□□□□ -1.14
LSP1YPL004C AMD2P22580 549 aa7.92□□□□□ -1.14
LSP1YPL004C TRX2P22803 104 aaKnown RBP7.92□□□□□ -1.14
LSP1YPL004C SEC14P24280 304 aaKnown RBP7.92□□□□□ -1.14
LSP1YPL004C MSH1P25846 959 aa7.92□□□□□ -1.14
LSP1YPL004C CYM1P32898 989 aa7.92□□□□□ -1.14
LSP1YPL004C HSE1P38753 452 aa7.92□□□□□ -1.14
LSP1YPL004C SSN3P39073 555 aa7.92□□□□□ -1.14
LSP1YPL004C SSP120P39931 234 aaKnown RBP7.92□□□□□ -1.14
LSP1YPL004C YPS6P40583 537 aa7.92□□□□□ -1.14
LSP1YPL004C SUN4P53616 420 aa7.92□□□□□ -1.14
LSP1YPL004C ZRG17P53735 605 aa7.92□□□□□ -1.14
LSP1YPL004C ARX1Q03862 593 aaKnown RBP7.92□□□□□ -1.14
LSP1YPL004C YLR177WQ06251 628 aa7.92□□□□□ -1.14
LSP1YPL004C TDA5Q06417 326 aaKnown RBP7.92□□□□□ -1.14
LSP1YPL004C MRH1Q12117 320 aaPredicted RBP7.92□□□□□ -1.14
LSP1YPL004C YMR030W-AQ3E760 96 aa7.92□□□□□ -1.14
LSP1YPL004C SWI5P08153 709 aa7.91□□□□□ -1.14
LSP1YPL004C SSC1P0CS90 654 aaKnown RBP7.91□□□□□ -1.14
LSP1YPL004C GCY1P14065 312 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
LSP1YPL004C RDS2P19541 446 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms