RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C NOP19P53317 196 aaPredicted RBP5.31□□□□□ -1.56
RAT1YOR048C HDA3Q06623 655 aa5.31□□□□□ -1.56
RAT1YOR048C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
RAT1YOR048C YLR126CQ12288 251 aa5.31□□□□□ -1.56
RAT1YOR048C ARP7Q12406 477 aa5.31□□□□□ -1.56
RAT1YOR048C AFI1Q99222 893 aa5.31□□□□□ -1.56
RAT1YOR048C UBR2Q07963 1872 aa5.31□□□□□ -1.56
RAT1YOR048C GCY1P14065 312 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
RAT1YOR048C PHO3P24031 467 aa5.31□□□□□ -1.56
RAT1YOR048C GBP2P25555 427 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
RAT1YOR048C POL4P25615 582 aa5.31□□□□□ -1.56
RAT1YOR048C FUN30P31380 1131 aa5.31□□□□□ -1.56
RAT1YOR048C TOM20P35180 183 aa5.31□□□□□ -1.56
RAT1YOR048C AHP1P38013 176 aaKnown RBP5.31□□□□□ -1.56
RAT1YOR048C FES1P38260 290 aa5.31□□□□□ -1.56
RAT1YOR048C YER186CP40101 306 aa5.31□□□□□ -1.56
RAT1YOR048C YPR003CP53394 754 aa5.31□□□□□ -1.56
RAT1YOR048C TRM112P53738 135 aaPredicted RBP5.31□□□□□ -1.56
RAT1YOR048C YDR239CQ03780 787 aa5.31□□□□□ -1.56
RAT1YOR048C JIP5Q06214 492 aaPredicted RBP5.31□□□□□ -1.56
RAT1YOR048C NTG2Q08214 380 aa5.31□□□□□ -1.56
RAT1YOR048C YOR389WQ08912 624 aa5.31□□□□□ -1.56
RAT1YOR048C CDC19P00549 500 aaKnown RBP5.31□□□□□ -1.56
RAT1YOR048C TPK2P06245 380 aa5.31□□□□□ -1.56
RAT1YOR048C MSF1P08425 469 aa5.31□□□□□ -1.56
RAT1YOR048C UGA1P17649 471 aa5.31□□□□□ -1.56
RAT1YOR048C BUB2P26448 306 aaPredicted RBP5.31□□□□□ -1.56
RAT1YOR048C RAD16P31244 790 aa5.31□□□□□ -1.56
RAT1YOR048C ACH1P32316 526 aa5.31□□□□□ -1.56
RAT1YOR048C AEP1P32493 518 aa5.31□□□□□ -1.56
RAT1YOR048C DRE2P36152 348 aa5.31□□□□□ -1.56
RAT1YOR048C EFM1P38732 585 aa5.31□□□□□ -1.56
RAT1YOR048C TES1P41903 349 aaKnown RBP5.31□□□□□ -1.56
RAT1YOR048C KEL2P50090 882 aa5.31□□□□□ -1.56
RAT1YOR048C ASI1P54074 624 aa5.31□□□□□ -1.56
RAT1YOR048C MSC2Q03455 724 aa5.31□□□□□ -1.56
RAT1YOR048C RSN1Q03516 953 aa5.31□□□□□ -1.56
RAT1YOR048C GOT1Q03554 138 aa5.31□□□□□ -1.56
RAT1YOR048C GAS3Q03655 524 aa5.31□□□□□ -1.56
RAT1YOR048C YDR131CQ03899 556 aa5.31□□□□□ -1.56
RAT1YOR048C YHC1Q05900 231 aaKnown RBP5.31□□□□□ -1.56
RAT1YOR048C SYT1Q06836 1226 aa5.31□□□□□ -1.56
RAT1YOR048C UBA1P22515 1024 aaKnown RBP5.3□□□□□ -1.56
RAT1YOR048C YIH1P25637 258 aa5.3□□□□□ -1.56
RAT1YOR048C DPH2P32461 534 aa5.3□□□□□ -1.56
RAT1YOR048C ARC1P46672 376 aaKnown RBP5.3□□□□□ -1.56
RAT1YOR048C HXT16P47185 567 aa5.3□□□□□ -1.56
RAT1YOR048C TIS11P47977 285 aa5.3□□□□□ -1.56
RAT1YOR048C DIE2P50076 525 aa5.3□□□□□ -1.56
RAT1YOR048C ARC35P53731 342 aaKnown RBP5.3□□□□□ -1.56
RAT1YOR048C RPN4Q03465 531 aa5.3□□□□□ -1.56
RAT1YOR048C GMC2Q06201 188 aa5.3□□□□□ -1.56
RAT1YOR048C YLR125WQ12138 136 aa5.3□□□□□ -1.56
RAT1YOR048C NBP2Q12163 236 aa5.3□□□□□ -1.56
RAT1YOR048C YOR022CQ12204 715 aa5.3□□□□□ -1.56
RAT1YOR048C HSH49Q99181 213 aaPredicted RBP5.3□□□□□ -1.56
RAT1YOR048C GLN3P18494 730 aa5.3□□□□□ -1.56
RAT1YOR048C PER1P25625 357 aa5.3□□□□□ -1.56
RAT1YOR048C ARO7P32178 256 aa5.3□□□□□ -1.56
RAT1YOR048C RGT1P32862 1170 aa5.3□□□□□ -1.56
RAT1YOR048C FSH1P38777 243 aaKnown RBP5.3□□□□□ -1.56
RAT1YOR048C AST2P39945 430 aaKnown RBP5.3□□□□□ -1.56
RAT1YOR048C YJR061WP40355 935 aa5.3□□□□□ -1.56
RAT1YOR048C VHR1P40522 640 aa5.3□□□□□ -1.56
RAT1YOR048C SWP82P43554 623 aa5.3□□□□□ -1.56
RAT1YOR048C BRE5P53741 515 aaKnown RBP5.3□□□□□ -1.56
RAT1YOR048C SLT2Q00772 484 aa5.3□□□□□ -1.56
RAT1YOR048C RRP15Q06511 250 aaPredicted RBP5.3□□□□□ -1.56
RAT1YOR048C VIK1Q12045 647 aa5.3□□□□□ -1.56
RAT1YOR048C YKL018C-AQ3E7A7 99 aa5.3□□□□□ -1.56
RAT1YOR048C HEM1P09950 548 aaPredicted RBP5.29□□□□□ -1.56
RAT1YOR048C RAP1P11938 827 aa5.29□□□□□ -1.56
RAT1YOR048C YSP3P25036 478 aa5.29□□□□□ -1.56
RAT1YOR048C STE14P32584 239 aa5.29□□□□□ -1.56
RAT1YOR048C SRL3P36167 246 aa5.29□□□□□ -1.56
RAT1YOR048C MRPL17P36528 281 aa5.29□□□□□ -1.56
RAT1YOR048C MUM2P38236 366 aa5.29□□□□□ -1.56
RAT1YOR048C GPB2P39717 880 aa5.29□□□□□ -1.56
RAT1YOR048C MTW1P39731 289 aa5.29□□□□□ -1.56
RAT1YOR048C ROK1P45818 564 aaPredicted RBP5.29□□□□□ -1.56
RAT1YOR048C RAI1P53063 387 aaKnown RBP5.29□□□□□ -1.56
RAT1YOR048C ORM1P53224 222 aa5.29□□□□□ -1.56
RAT1YOR048C VAC7P53950 1165 aa5.29□□□□□ -1.56
RAT1YOR048C SPR6Q01684 191 aa5.29□□□□□ -1.56
RAT1YOR048C JIP4Q03361 876 aa5.29□□□□□ -1.56
RAT1YOR048C HRD3Q05787 833 aa5.29□□□□□ -1.56
RAT1YOR048C VAM6Q07468 1049 aa5.29□□□□□ -1.56
RAT1YOR048C AAD4Q07747 329 aa5.29□□□□□ -1.56
RAT1YOR048C CMR1Q12510 522 aaKnown RBP5.29□□□□□ -1.56
RAT1YOR048C BCY1P07278 416 aaKnown RBP5.29□□□□□ -1.56
RAT1YOR048C STE6P12866 1290 aa5.29□□□□□ -1.56
RAT1YOR048C RBK1P25332 333 aa5.29□□□□□ -1.56
RAT1YOR048C SPC34P36131 295 aa5.29□□□□□ -1.56
RAT1YOR048C YMC2P38087 329 aa5.29□□□□□ -1.56
RAT1YOR048C OPT1P40897 799 aa5.29□□□□□ -1.56
RAT1YOR048C IMD4P50094 524 aaKnown RBP5.29□□□□□ -1.56
RAT1YOR048C SAP4P53036 818 aa5.29□□□□□ -1.56
RAT1YOR048C RCF2P53721 224 aa5.29□□□□□ -1.56
RAT1YOR048C ATP6P00854 259 aa5.29□□□□□ -1.56
RAT1YOR048C INO1P11986 533 aa5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms