RNA–Protein interactions for RNA: YNL044W

YIP3, Transcript of Protein localized to COPII vesicles, yeast

Gene YIP3, Length 531 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIP3	YNL044W	EFM2	P38347	419 aa		4.61	□□□□□ -1.67
YIP3	YNL044W	RIC1	P40395	1056 aa		4.61	□□□□□ -1.67
YIP3	YNL044W	CTL1	Q03220	320 aa	Known RBP	4.61	□□□□□ -1.67
YIP3	YNL044W	NRT1	Q08485	598 aa		4.61	□□□□□ -1.67
YIP3	YNL044W	SSM4	P40318	1319 aa		4.61	□□□□□ -1.67
YIP3	YNL044W	YLR302C	O13544	120 aa		4.6	□□□□□ -1.67
YIP3	YNL044W	KRS1	P15180	591 aa	Known RBP	4.6	□□□□□ -1.67
YIP3	YNL044W	STV1	P37296	890 aa		4.6	□□□□□ -1.67
YIP3	YNL044W	YND1	P40009	630 aa		4.6	□□□□□ -1.67
YIP3	YNL044W	VPS4	P52917	437 aa		4.6	□□□□□ -1.67
YIP3	YNL044W	IST1	P53843	298 aa	Predicted RBP	4.6	□□□□□ -1.67
YIP3	YNL044W	GTR1	Q00582	310 aa		4.6	□□□□□ -1.67
YIP3	YNL044W	TRM8	Q12009	286 aa		4.6	□□□□□ -1.67
YIP3	YNL044W	YOR019W	Q99248	730 aa		4.6	□□□□□ -1.67
YIP3	YNL044W	HXK2	P04807	486 aa	Known RBP	4.59	□□□□□ -1.67
YIP3	YNL044W	SNF1	P06782	633 aa	Known RBP	4.59	□□□□□ -1.67
YIP3	YNL044W	EDE1	P34216	1381 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	YPK3	P38070	525 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	BZZ1	P38822	633 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	PSD1	P39006	500 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	IES5	P40060	125 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	HXT9	P40885	567 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	BNA1	P47096	177 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	YNR061C	P53747	219 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	ATG16	Q03818	150 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	VID22	Q05934	901 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	PSR2	Q07949	397 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	PSK2	Q08217	1101 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	NUS1	Q12063	375 aa		4.59	□□□□□ -1.67
YIP3	YNL044W	GUK1	P15454	187 aa	Known RBP	4.58	□□□□□ -1.68
YIP3	YNL044W	RPB8	P20436	146 aa		4.58	□□□□□ -1.68
YIP3	YNL044W	MGR1	P25573	417 aa		4.58	□□□□□ -1.68
YIP3	YNL044W	PDR3	P33200	976 aa		4.58	□□□□□ -1.68
YIP3	YNL044W	RTT107	P38850	1070 aa		4.58	□□□□□ -1.68
YIP3	YNL044W	PKP1	P40530	394 aa		4.58	□□□□□ -1.68
YIP3	YNL044W	NNF2	P53253	936 aa		4.58	□□□□□ -1.68
YIP3	YNL044W	TAH18	Q12181	623 aa		4.58	□□□□□ -1.68
YIP3	YNL044W	HNM1	P19807	563 aa		4.57	□□□□□ -1.68
YIP3	YNL044W	IAH1	P41734	238 aa		4.57	□□□□□ -1.68
YIP3	YNL044W	IME4	P41833	600 aa		4.57	□□□□□ -1.68
YIP3	YNL044W	MAK10	Q02197	733 aa		4.57	□□□□□ -1.68
YIP3	YNL044W	EKI1	Q03764	534 aa		4.57	□□□□□ -1.68
YIP3	YNL044W	IOC4	Q04213	475 aa		4.57	□□□□□ -1.68
YIP3	YNL044W	VMS1	Q04311	632 aa	Known RBP	4.57	□□□□□ -1.68
YIP3	YNL044W	YOR111W	Q99210	232 aa		4.57	□□□□□ -1.68
YIP3	YNL044W	PPZ1	P26570	692 aa		4.56	□□□□□ -1.68
YIP3	YNL044W	RAD24	P32641	659 aa		4.56	□□□□□ -1.68
YIP3	YNL044W	YGR021W	P53212	290 aa		4.56	□□□□□ -1.68
YIP3	YNL044W	YMR178W	Q03219	274 aa	Known RBP	4.56	□□□□□ -1.68
YIP3	YNL044W	YDL218W	Q07629	317 aa		4.56	□□□□□ -1.68
YIP3	YNL044W	YBR085C-A	O43137	85 aa		4.55	□□□□□ -1.68
YIP3	YNL044W	RPB2	P08518	1224 aa	Known RBP	4.55	□□□□□ -1.68
YIP3	YNL044W	SLC1	P33333	303 aa		4.55	□□□□□ -1.68
YIP3	YNL044W	MIA40	P36046	403 aa		4.55	□□□□□ -1.68
YIP3	YNL044W	SEC24	P40482	926 aa	Known RBP	4.55	□□□□□ -1.68
YIP3	YNL044W	RTS2	P40962	232 aa		4.55	□□□□□ -1.68
YIP3	YNL044W	DPB11	P47027	764 aa	Predicted RBP	4.55	□□□□□ -1.68
YIP3	YNL044W	SMC3	P47037	1230 aa		4.55	□□□□□ -1.68
YIP3	YNL044W	RCO1	Q04779	684 aa		4.55	□□□□□ -1.68
YIP3	YNL044W	RSF1	Q05043	376 aa		4.55	□□□□□ -1.68
YIP3	YNL044W	YLR352W	Q06479	807 aa		4.55	□□□□□ -1.68
YIP3	YNL044W	ATG9	Q12142	997 aa		4.55	□□□□□ -1.68
YIP3	YNL044W	GAC1	P28006	793 aa		4.54	□□□□□ -1.68
YIP3	YNL044W	ATG27	P46989	271 aa		4.54	□□□□□ -1.68
YIP3	YNL044W	YGL260W	P53056	76 aa		4.54	□□□□□ -1.68
YIP3	YNL044W	HOS2	P53096	452 aa	Predicted RBP	4.54	□□□□□ -1.68
YIP3	YNL044W	SMA1	Q02651	245 aa		4.54	□□□□□ -1.68
YIP3	YNL044W	MUB1	Q03162	620 aa		4.54	□□□□□ -1.68
YIP3	YNL044W	YOL159C	Q08300	171 aa		4.54	□□□□□ -1.68
YIP3	YNL044W	CDC23	P16522	626 aa		4.53	□□□□□ -1.68
YIP3	YNL044W	PWP2	P25635	923 aa	Known RBP	4.53	□□□□□ -1.68
YIP3	YNL044W	MRP20	P32387	263 aa		4.53	□□□□□ -1.68
YIP3	YNL044W	RPN2	P32565	945 aa	Known RBP	4.53	□□□□□ -1.68
YIP3	YNL044W	RGT1	P32862	1170 aa		4.53	□□□□□ -1.68
YIP3	YNL044W	VPS24	P36095	224 aa	Known RBP	4.53	□□□□□ -1.68
YIP3	YNL044W	CCT4	P39078	528 aa	Known RBP	4.53	□□□□□ -1.68
YIP3	YNL044W	YER010C	P40011	234 aa		4.53	□□□□□ -1.68
YIP3	YNL044W	KAP123	P40069	1113 aa	Known RBP	4.53	□□□□□ -1.68
YIP3	YNL044W	YIL060W	P40519	144 aa		4.53	□□□□□ -1.68
YIP3	YNL044W	YDR415C	Q04033	374 aa	Predicted RBP	4.53	□□□□□ -1.68
YIP3	YNL044W	YMR317W	Q04893	1140 aa		4.53	□□□□□ -1.68
YIP3	YNL044W	APL4	Q12028	832 aa		4.53	□□□□□ -1.68
YIP3	YNL044W	BSC1	Q12140	328 aa		4.53	□□□□□ -1.68
YIP3	YNL044W	INP53	Q12271	1107 aa		4.53	□□□□□ -1.68
YIP3	YNL044W	LCB1	P25045	558 aa	Known RBP	4.52	□□□□□ -1.69
YIP3	YNL044W	GID7	P25569	745 aa		4.52	□□□□□ -1.69
YIP3	YNL044W	YKL050C	P35736	922 aa		4.52	□□□□□ -1.69
YIP3	YNL044W	KTR3	P38130	404 aa	Predicted RBP	4.52	□□□□□ -1.69
YIP3	YNL044W	UIP3	P39547	235 aa		4.52	□□□□□ -1.69
YIP3	YNL044W	SLZ1	P40167	298 aa		4.52	□□□□□ -1.69
YIP3	YNL044W	FET5	P43561	622 aa		4.52	□□□□□ -1.69
YIP3	YNL044W	CUL3	P53202	744 aa		4.52	□□□□□ -1.69
YIP3	YNL044W	SKG3	Q06315	1026 aa		4.52	□□□□□ -1.69
YIP3	YNL044W	BAR1	P12630	587 aa		4.51	□□□□□ -1.69
YIP3	YNL044W	TRS65	P32893	560 aa		4.51	□□□□□ -1.69
YIP3	YNL044W	SNU114	P36048	1008 aa	Known RBP	4.51	□□□□□ -1.69
YIP3	YNL044W	ALY1	P36117	915 aa		4.51	□□□□□ -1.69
YIP3	YNL044W	AXL2	P38928	823 aa		4.51	□□□□□ -1.69
YIP3	YNL044W	PHO90	P39535	881 aa		4.51	□□□□□ -1.69
YIP3	YNL044W	PIL1	P53252	339 aa	Known RBP	4.51	□□□□□ -1.69

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