RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	MTG1	Q03151	367 aa	Predicted RBP	0.52	□□□□□ -2.33
RCO1	YMR075W	EKI1	Q03764	534 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	ARP10	Q04549	284 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	TRI1	Q05024	226 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	YDL218W	Q07629	317 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	RDR1	Q08904	546 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	ARP7	Q12406	477 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	SET6	Q12529	373 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	YBR255C-A	Q3E776	120 aa		0.52	□□□□□ -2.33
RCO1	YMR075W	URK1	P27515	501 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	CDC15	P27636	974 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	DEG1	P31115	442 aa	Known RBP	0.51	□□□□□ -2.33
RCO1	YMR075W	YME1	P32795	747 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	NUP120	P35729	1037 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	APM3	P38153	483 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	TIF5	P38431	405 aa	Known RBP	0.51	□□□□□ -2.33
RCO1	YMR075W	STT3	P39007	718 aa	Known RBP	0.51	□□□□□ -2.33
RCO1	YMR075W	IDP2	P41939	412 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	YTP1	P53584	459 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	CNM67	P53865	581 aa	Known RBP	0.51	□□□□□ -2.33
RCO1	YMR075W	CEG1	Q01159	459 aa	Predicted RBP	0.51	□□□□□ -2.33
RCO1	YMR075W	YLR455W	Q06188	304 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	FMP45	Q07651	309 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	YPS3	Q12303	508 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	YOL114C	Q12322	202 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	SUL2	Q12325	893 aa		0.51	□□□□□ -2.33
RCO1	YMR075W	RRP12	Q12754	1228 aa	Known RBP	0.51	□□□□□ -2.33
RCO1	YMR075W	ATP2	P00830	511 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	PET111	P08468	800 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	MIS1	P09440	975 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	MCK1	P21965	375 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	TKL1	P23254	680 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	GRX4	P32642	244 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	SOF1	P33750	489 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	SEC31	P38968	1273 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	RPH1	P39956	796 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	VPS27	P40343	622 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	DJP1	P40564	432 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	YFR020W	P43600	232 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	MSY1	P48527	492 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	TEP1	P53916	434 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	ASI1	P54074	624 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	GTB1	Q04924	702 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	ERP1	Q05359	219 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	CRN1	Q06440	651 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	SWT1	Q12104	458 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	COX17	Q12287	69 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	CHO1	P08456	276 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	PCT1	P13259	424 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	MTF1	P14908	341 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	YEF3	P16521	1044 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	0.5	□□□□□ -2.33	not detected
RCO1	YMR075W	SPE2	P21182	396 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	CLB4	P24871	460 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	LCB1	P25045	558 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	RAD16	P31244	790 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	ERG1	P32476	496 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	MRP21	P38175	177 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	BMT2	P38278	337 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	ERG7	P38604	731 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	MRX1	P40050	688 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	RPT2	P40327	437 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	YIL060W	P40519	144 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	FET5	P43561	622 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	DCP2	P53550	970 aa	Known RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	TDA7	P53882	636 aa	Predicted RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	YMR027W	Q04371	470 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	IWR1	Q07532	353 aa	Predicted RBP	0.5	□□□□□ -2.33
RCO1	YMR075W	YEH2	Q07950	538 aa		0.5	□□□□□ -2.33
RCO1	YMR075W	RPL15A	P05748	204 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	TPK1	P06244	397 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	SST2	P11972	698 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	SPT15	P13393	240 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	SIR1	P21691	654 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	MCM3	P24279	971 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	STE50	P25344	346 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	LRE1	P25579	583 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	MRC1	P25588	1096 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	SAC1	P32368	623 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	FRD1	P32614	470 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	NTR2	P36118	322 aa	Predicted RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	KTR3	P38130	404 aa	Predicted RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	YBR138C	P38277	524 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	PSF2	P40359	213 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	HXT9	P40885	567 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	SHY1	P53266	389 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	TRS130	Q03660	1102 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	TMA64	Q04600	565 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	HCR1	Q05775	265 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	BAG7	Q12128	409 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	ERG27	Q12452	347 aa	Known RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	PIF1	P07271	859 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	YML003W	P0CF16	290 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	PHO81	P17442	1178 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	YSP3	P25036	478 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	GID7	P25569	745 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	PTR2	P32901	601 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	LOS1	P33418	1100 aa	Predicted RBP	0.49	□□□□□ -2.33
RCO1	YMR075W	PHD1	P36093	366 aa		0.49	□□□□□ -2.33
RCO1	YMR075W	ESL2	P36168	1195 aa		0.49	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms