RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C YTP1P53584 459 aa3.83□□□□□ -1.8
SUB1YMR039C UBX4P54730 416 aa3.83□□□□□ -1.8
SUB1YMR039C MRPL13Q02204 264 aa3.83□□□□□ -1.8
SUB1YMR039C VPS72Q03388 795 aa3.83□□□□□ -1.8
SUB1YMR039C YLR352WQ06479 807 aa3.83□□□□□ -1.8
SUB1YMR039C PGI1P12709 554 aaKnown RBP3.82□□□□□ -1.8
SUB1YMR039C UBC1P21734 215 aaKnown RBP3.82□□□□□ -1.8
SUB1YMR039C RPN2P32565 945 aaKnown RBP3.82□□□□□ -1.8
SUB1YMR039C SWE1P32944 819 aa3.82□□□□□ -1.8
SUB1YMR039C RFC1P38630 861 aaKnown RBP3.82□□□□□ -1.8
SUB1YMR039C YJL070CP40361 888 aa3.82□□□□□ -1.8
SUB1YMR039C EKI1Q03764 534 aa3.82□□□□□ -1.8
SUB1YMR039C RTT103Q05543 409 aa3.82□□□□□ -1.8
SUB1YMR039C TFC6Q06339 672 aa3.82□□□□□ -1.8
SUB1YMR039C PCD1Q12524 340 aa3.82□□□□□ -1.8
SUB1YMR039C YMR230W-AQ3E7B5 62 aa3.82□□□□□ -1.8
SUB1YMR039C IST3P40565 148 aaPredicted RBP3.81□□□□□ -1.8
SUB1YMR039C RTS2P40962 232 aa3.81□□□□□ -1.8
SUB1YMR039C YFR020WP43600 232 aa3.81□□□□□ -1.8
SUB1YMR039C IST1P53843 298 aaPredicted RBP3.81□□□□□ -1.8
SUB1YMR039C SMA1Q02651 245 aa3.81□□□□□ -1.8
SUB1YMR039C BLS1Q06071 122 aa3.81□□□□□ -1.8
SUB1YMR039C CSR1Q06705 408 aaKnown RBP3.81□□□□□ -1.8
SUB1YMR039C ERG27Q12452 347 aaKnown RBP3.81□□□□□ -1.8
SUB1YMR039C EDE1P34216 1381 aa3.8□□□□□ -1.8
SUB1YMR039C BAR1P12630 587 aa3.8□□□□□ -1.8
SUB1YMR039C APA1P16550 321 aaKnown RBP3.8□□□□□ -1.8
SUB1YMR039C RPB8P20436 146 aa3.8□□□□□ -1.8
SUB1YMR039C GAC1P28006 793 aa3.8□□□□□ -1.8
SUB1YMR039C PTH2P34222 208 aa3.8□□□□□ -1.8
SUB1YMR039C STV1P37296 890 aa3.8□□□□□ -1.8
SUB1YMR039C IFA38P38286 347 aa3.8□□□□□ -1.8
SUB1YMR039C NAB3P38996 802 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SUB1YMR039C FCP1Q03254 732 aa3.8□□□□□ -1.8
SUB1YMR039C VCX1Q99385 411 aa3.8□□□□□ -1.8
SUB1YMR039C GID7P25569 745 aa3.79□□□□□ -1.8
SUB1YMR039C CDC15P27636 974 aa3.79□□□□□ -1.8
SUB1YMR039C RAD16P31244 790 aa3.79□□□□□ -1.8
SUB1YMR039C XRS2P33301 854 aa3.79□□□□□ -1.8
SUB1YMR039C MIA40P36046 403 aa3.79□□□□□ -1.8
SUB1YMR039C ESL2P36168 1195 aa3.79□□□□□ -1.8
SUB1YMR039C PFK26P40433 827 aaKnown RBP3.79□□□□□ -1.8
SUB1YMR039C YIR014WP40570 242 aa3.79□□□□□ -1.8
SUB1YMR039C CTF18P49956 741 aa3.79□□□□□ -1.8
SUB1YMR039C GIS2P53849 153 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SUB1YMR039C CRZ1P53968 678 aa3.79□□□□□ -1.8
SUB1YMR039C YMR178WQ03219 274 aaKnown RBP3.79□□□□□ -1.8
SUB1YMR039C SCW10Q04951 389 aa3.79□□□□□ -1.8
SUB1YMR039C BSC1Q12140 328 aa3.79□□□□□ -1.8
SUB1YMR039C PMS1P14242 873 aa3.78□□□□□ -1.8
SUB1YMR039C PFK2P16862 959 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
SUB1YMR039C DPB3P27344 201 aa3.78□□□□□ -1.8
SUB1YMR039C PHO90P39535 881 aa3.78□□□□□ -1.8
SUB1YMR039C RGI2P40188 164 aa3.78□□□□□ -1.8
SUB1YMR039C PKP1P40530 394 aa3.78□□□□□ -1.8
SUB1YMR039C FET5P43561 622 aa3.78□□□□□ -1.8
SUB1YMR039C VMS1Q04311 632 aaKnown RBP3.78□□□□□ -1.8
SUB1YMR039C YDL218WQ07629 317 aa3.78□□□□□ -1.8
SUB1YMR039C HXK2P04807 486 aaKnown RBP3.77□□□□□ -1.81
SUB1YMR039C PWP2P25635 923 aaKnown RBP3.77□□□□□ -1.81
SUB1YMR039C DBF20P32328 564 aa3.77□□□□□ -1.81
SUB1YMR039C RIM2P38127 377 aa3.77□□□□□ -1.81
SUB1YMR039C SMK1P41808 388 aa3.77□□□□□ -1.81
SUB1YMR039C SMC3P47037 1230 aa3.77□□□□□ -1.81
SUB1YMR039C VPS4P52917 437 aa3.77□□□□□ -1.81
SUB1YMR039C YNR061CP53747 219 aa3.77□□□□□ -1.81
SUB1YMR039C YML002WP0CF17 737 aa3.76□□□□□ -1.81
SUB1YMR039C TRS65P32893 560 aa3.76□□□□□ -1.81
SUB1YMR039C VPS24P36095 224 aaKnown RBP3.76□□□□□ -1.81
SUB1YMR039C NNF2P53253 936 aa3.76□□□□□ -1.81
SUB1YMR039C ATG9Q12142 997 aa3.76□□□□□ -1.81
SUB1YMR039C ERG8P24521 451 aa3.75□□□□□ -1.81
SUB1YMR039C MRS6P32864 603 aaKnown RBP3.75□□□□□ -1.81
SUB1YMR039C TEF4P36008 412 aaKnown RBP3.75□□□□□ -1.81
SUB1YMR039C UME6P39001 836 aa3.75□□□□□ -1.81
SUB1YMR039C DPB11P47027 764 aaPredicted RBP3.75□□□□□ -1.81
SUB1YMR039C REG1Q00816 1014 aa3.75□□□□□ -1.81
SUB1YMR039C NUP100Q02629 959 aa3.75□□□□□ -1.81
SUB1YMR039C YDR415CQ04033 374 aaPredicted RBP3.75□□□□□ -1.81
SUB1YMR039C PSK2Q08217 1101 aa3.75□□□□□ -1.81
SUB1YMR039C DAP1Q12091 152 aa3.75□□□□□ -1.81
SUB1YMR039C TIP41Q12199 356 aa3.75□□□□□ -1.81
SUB1YMR039C YOR019WQ99248 730 aa3.75□□□□□ -1.81
SUB1YMR039C GLN3P18494 730 aa3.74□□□□□ -1.81
SUB1YMR039C MIC60P36112 540 aa3.74□□□□□ -1.81
SUB1YMR039C ERG7P38604 731 aa3.74□□□□□ -1.81
SUB1YMR039C ARP1P38696 384 aa3.74□□□□□ -1.81
SUB1YMR039C YIL060WP40519 144 aa3.74□□□□□ -1.81
SUB1YMR039C RRT6P53117 311 aaPredicted RBP3.74□□□□□ -1.81
SUB1YMR039C ATG26Q06321 1198 aa3.74□□□□□ -1.81
SUB1YMR039C BUD21Q08492 214 aaPredicted RBP3.74□□□□□ -1.81
SUB1YMR039C NUS1Q12063 375 aa3.74□□□□□ -1.81
SUB1YMR039C SSM4P40318 1319 aa3.73□□□□□ -1.81
SUB1YMR039C YKL050CP35736 922 aa3.73□□□□□ -1.81
SUB1YMR039C UIP3P39547 235 aa3.73□□□□□ -1.81
SUB1YMR039C SAP185P40856 1058 aa3.73□□□□□ -1.81
SUB1YMR039C AZF1P41696 914 aa3.73□□□□□ -1.81
SUB1YMR039C GUF1P46943 645 aa3.73□□□□□ -1.81
SUB1YMR039C PKP2P53170 491 aa3.73□□□□□ -1.81
SUB1YMR039C ATG16Q03818 150 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms