RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeast

Gene SMD3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMD3	YLR147C	IML2	P47031	731 aa		4.13	□□□□□ -1.75
SMD3	YLR147C	SGF73	P53165	657 aa		4.13	□□□□□ -1.75
SMD3	YLR147C	YGR021W	P53212	290 aa		4.13	□□□□□ -1.75
SMD3	YLR147C	YMR254C	Q04838	102 aa		4.13	□□□□□ -1.75
SMD3	YLR147C	MCP2	Q06567	569 aa		4.13	□□□□□ -1.75
SMD3	YLR147C	YOL159C	Q08300	171 aa		4.13	□□□□□ -1.75
SMD3	YLR147C	ATG9	Q12142	997 aa		4.13	□□□□□ -1.75
SMD3	YLR147C	RPB2	P08518	1224 aa	Known RBP	4.12	□□□□□ -1.75
SMD3	YLR147C	GUK1	P15454	187 aa	Known RBP	4.12	□□□□□ -1.75
SMD3	YLR147C	PWP2	P25635	923 aa	Known RBP	4.12	□□□□□ -1.75
SMD3	YLR147C	CNS1	P33313	385 aa		4.12	□□□□□ -1.75
SMD3	YLR147C	ESL2	P36168	1195 aa		4.12	□□□□□ -1.75
SMD3	YLR147C	EFM2	P38347	419 aa		4.12	□□□□□ -1.75
SMD3	YLR147C	ARP1	P38696	384 aa		4.12	□□□□□ -1.75
SMD3	YLR147C	AXL2	P38928	823 aa		4.12	□□□□□ -1.75
SMD3	YLR147C	VRG4	P40107	337 aa		4.12	□□□□□ -1.75
SMD3	YLR147C	RIC1	P40395	1056 aa		4.12	□□□□□ -1.75
SMD3	YLR147C	SEC24	P40482	926 aa	Known RBP	4.12	□□□□□ -1.75
SMD3	YLR147C	IME4	P41833	600 aa		4.12	□□□□□ -1.75
SMD3	YLR147C	IST1	P53843	298 aa	Predicted RBP	4.12	□□□□□ -1.75
SMD3	YLR147C	YOL087C	Q99247	1116 aa		4.12	□□□□□ -1.75
SMD3	YLR147C	YLR302C	O13544	120 aa		4.11	□□□□□ -1.75
SMD3	YLR147C	FUI1	P38196	639 aa		4.11	□□□□□ -1.75
SMD3	YLR147C	RFC1	P38630	861 aa	Known RBP	4.11	□□□□□ -1.75
SMD3	YLR147C	FMP10	P40098	244 aa		4.11	□□□□□ -1.75
SMD3	YLR147C	PIL1	P53252	339 aa	Known RBP	4.11	□□□□□ -1.75
SMD3	YLR147C	YNL181W	P53878	407 aa		4.11	□□□□□ -1.75
SMD3	YLR147C	VMS1	Q04311	632 aa	Known RBP	4.11	□□□□□ -1.75
SMD3	YLR147C	RCO1	Q04779	684 aa		4.11	□□□□□ -1.75
SMD3	YLR147C	NRT1	Q08485	598 aa		4.11	□□□□□ -1.75
SMD3	YLR147C	NUS1	Q12063	375 aa		4.11	□□□□□ -1.75
SMD3	YLR147C	KRS1	P15180	591 aa	Known RBP	4.1	□□□□□ -1.75
SMD3	YLR147C	CDC23	P16522	626 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	CDC15	P27636	974 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	MRP20	P32387	263 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	PDR3	P33200	976 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	SLC1	P33333	303 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	YPK3	P38070	525 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	YER010C	P40011	234 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	YAT2	P40017	923 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	PKP1	P40530	394 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	MAF1	P41910	395 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	SMA1	Q02651	245 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	EKI1	Q03764	534 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	SNO4	Q04902	237 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	FMP42	Q04991	504 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	YLR281C	Q05863	155 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	GRS2	Q06817	618 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	HSP33	Q08914	237 aa	Known RBP	4.1	□□□□□ -1.75
SMD3	YLR147C	NEW1	Q08972	1196 aa	Known RBP	4.1	□□□□□ -1.75
SMD3	YLR147C	HSP32	Q08992	237 aa		4.1	□□□□□ -1.75
SMD3	YLR147C	YBR085C-A	O43137	85 aa		4.09	□□□□□ -1.75
SMD3	YLR147C	HNM1	P19807	563 aa		4.09	□□□□□ -1.75
SMD3	YLR147C	MGR1	P25573	417 aa		4.09	□□□□□ -1.75
SMD3	YLR147C	GAC1	P28006	793 aa		4.09	□□□□□ -1.75
SMD3	YLR147C	YIL060W	P40519	144 aa		4.09	□□□□□ -1.75
SMD3	YLR147C	RTS3	P53289	263 aa		4.09	□□□□□ -1.75
SMD3	YLR147C	INN1	P53901	409 aa		4.09	□□□□□ -1.75
SMD3	YLR147C	MUB1	Q03162	620 aa		4.09	□□□□□ -1.75
SMD3	YLR147C	EDE1	P34216	1381 aa		4.09	□□□□□ -1.75
SMD3	YLR147C	HXK2	P04807	486 aa	Known RBP	4.08	□□□□□ -1.76
SMD3	YLR147C	CBF2	P32504	956 aa		4.08	□□□□□ -1.76
SMD3	YLR147C	ALY1	P36117	915 aa		4.08	□□□□□ -1.76
SMD3	YLR147C	RKM3	P38222	552 aa		4.08	□□□□□ -1.76
SMD3	YLR147C	SLZ1	P40167	298 aa		4.08	□□□□□ -1.76
SMD3	YLR147C	RTS2	P40962	232 aa		4.08	□□□□□ -1.76
SMD3	YLR147C	DPB11	P47027	764 aa	Predicted RBP	4.08	□□□□□ -1.76
SMD3	YLR147C	SMC3	P47037	1230 aa		4.08	□□□□□ -1.76
SMD3	YLR147C	NNF2	P53253	936 aa		4.08	□□□□□ -1.76
SMD3	YLR147C	YNL234W	P53857	426 aa		4.08	□□□□□ -1.76
SMD3	YLR147C	INA17	Q02888	182 aa		4.08	□□□□□ -1.76
SMD3	YLR147C	YMR178W	Q03219	274 aa	Known RBP	4.08	□□□□□ -1.76
SMD3	YLR147C	CTL1	Q03220	320 aa	Known RBP	4.08	□□□□□ -1.76
SMD3	YLR147C	ADE13	Q05911	482 aa	Known RBP	4.08	□□□□□ -1.76
SMD3	YLR147C	RPB8	P20436	146 aa		4.07	□□□□□ -1.76
SMD3	YLR147C	SEC1	P30619	724 aa	Known RBP	4.07	□□□□□ -1.76
SMD3	YLR147C	MIA40	P36046	403 aa		4.07	□□□□□ -1.76
SMD3	YLR147C	SNU114	P36048	1008 aa	Known RBP	4.07	□□□□□ -1.76
SMD3	YLR147C	RRN3	P36070	627 aa		4.07	□□□□□ -1.76
SMD3	YLR147C	PHO90	P39535	881 aa		4.07	□□□□□ -1.76
SMD3	YLR147C	HOS2	P53096	452 aa	Predicted RBP	4.07	□□□□□ -1.76
SMD3	YLR147C	YML131W	Q03102	365 aa		4.07	□□□□□ -1.76
SMD3	YLR147C	YDL218W	Q07629	317 aa		4.07	□□□□□ -1.76
SMD3	YLR147C	STV1	P37296	890 aa		4.06	□□□□□ -1.76
SMD3	YLR147C	KAP123	P40069	1113 aa	Known RBP	4.06	□□□□□ -1.76
SMD3	YLR147C	IAH1	P41734	238 aa		4.06	□□□□□ -1.76
SMD3	YLR147C	FET5	P43561	622 aa		4.06	□□□□□ -1.76
SMD3	YLR147C	SAD1	P43589	448 aa		4.06	□□□□□ -1.76
SMD3	YLR147C	ATG27	P46989	271 aa		4.06	□□□□□ -1.76
SMD3	YLR147C	PKP2	P53170	491 aa		4.06	□□□□□ -1.76
SMD3	YLR147C	ZDS2	P54786	942 aa		4.06	□□□□□ -1.76
SMD3	YLR147C	NUP100	Q02629	959 aa		4.06	□□□□□ -1.76
SMD3	YLR147C	RSF1	Q05043	376 aa		4.06	□□□□□ -1.76
SMD3	YLR147C	INP53	Q12271	1107 aa		4.06	□□□□□ -1.76
SMD3	YLR147C	BAR1	P12630	587 aa		4.05	□□□□□ -1.76
SMD3	YLR147C	PGS1	P25578	521 aa		4.05	□□□□□ -1.76
SMD3	YLR147C	PPZ1	P26570	692 aa		4.05	□□□□□ -1.76
SMD3	YLR147C	RAD24	P32641	659 aa		4.05	□□□□□ -1.76
SMD3	YLR147C	BZZ1	P38822	633 aa		4.05	□□□□□ -1.76
SMD3	YLR147C	RTT107	P38850	1070 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms