RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W VMA22P38784 181 aa4.49□□□□□ -1.69
AVT1YJR001W FLC2P39719 783 aa4.49□□□□□ -1.69
AVT1YJR001W YEL057CP39983 233 aa4.49□□□□□ -1.69
AVT1YJR001W YRB2P40517 327 aa4.49□□□□□ -1.69
AVT1YJR001W VID28P40547 921 aa4.49□□□□□ -1.69
AVT1YJR001W SLS1P42900 643 aa4.49□□□□□ -1.69
AVT1YJR001W ARC1P46672 376 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W PDR16P53860 351 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W CUS1Q02554 436 aaPredicted RBP4.49□□□□□ -1.69
AVT1YJR001W PLP1Q04004 230 aa4.49□□□□□ -1.69
AVT1YJR001W SPC24Q04477 213 aa4.49□□□□□ -1.69
AVT1YJR001W RTT103Q05543 409 aa4.49□□□□□ -1.69
AVT1YJR001W DCS1Q06151 350 aa4.49□□□□□ -1.69
AVT1YJR001W VPS54Q12071 889 aa4.49□□□□□ -1.69
AVT1YJR001W DIN7Q12086 430 aa4.49□□□□□ -1.69
AVT1YJR001W TY3A-GQ12173 290 aa4.49□□□□□ -1.69
AVT1YJR001W TY3A-IQ99219 290 aa4.49□□□□□ -1.69
AVT1YJR001W PAB1P04147 577 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
AVT1YJR001W RPL11AP0C0W9 174 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W DAP2P18962 818 aa4.49□□□□□ -1.69
AVT1YJR001W RPI1P23250 407 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W CPR2P23285 205 aa4.49□□□□□ -1.69
AVT1YJR001W YCK1P23291 538 aa4.49□□□□□ -1.69
AVT1YJR001W SWI4P25302 1093 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W YCR051WP25631 222 aa4.49□□□□□ -1.69
AVT1YJR001W CDC15P27636 974 aa4.49□□□□□ -1.69
AVT1YJR001W PMT1P33775 817 aa4.49□□□□□ -1.69
AVT1YJR001W SRB2P34162 210 aa4.49□□□□□ -1.69
AVT1YJR001W YKL151CP36059 337 aa4.49□□□□□ -1.69
AVT1YJR001W YKR051WP36142 418 aa4.49□□□□□ -1.69
AVT1YJR001W MRPL36P36531 177 aa4.49□□□□□ -1.69
AVT1YJR001W KAP104P38217 918 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W RTT107P38850 1070 aa4.49□□□□□ -1.69
AVT1YJR001W YER137CP40083 148 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W PCI8P40512 444 aa4.49□□□□□ -1.69
AVT1YJR001W SYG1P40528 902 aa4.49□□□□□ -1.69
AVT1YJR001W ALY2P47029 1046 aa4.49□□□□□ -1.69
AVT1YJR001W HSH155P49955 971 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W TAF4P50105 388 aa4.49□□□□□ -1.69
AVT1YJR001W SKP1P52286 194 aa4.49□□□□□ -1.69
AVT1YJR001W GPD1Q00055 391 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W ABZ2Q03266 374 aa4.49□□□□□ -1.69
AVT1YJR001W EFR3Q03653 782 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W UFO1Q04511 668 aa4.49□□□□□ -1.69
AVT1YJR001W VPS36Q06696 566 aa4.49□□□□□ -1.69
AVT1YJR001W LUC7Q07508 261 aaPredicted RBP4.49□□□□□ -1.69
AVT1YJR001W RPL11BQ3E757 174 aaPredicted RBP4.49□□□□□ -1.69
AVT1YJR001W LAG2Q92325 660 aa4.49□□□□□ -1.69
AVT1YJR001W TRP3P00937 484 aa4.48□□□□□ -1.69
AVT1YJR001W HTS1P07263 546 aaKnown RBP4.48□□□□□ -1.69
AVT1YJR001W YEL076C-AP0CX16 216 aa4.48□□□□□ -1.69
AVT1YJR001W YLR464WP0CX17 216 aa4.48□□□□□ -1.69
AVT1YJR001W CDC24P11433 854 aaPredicted RBP4.48□□□□□ -1.69
AVT1YJR001W STE12P13574 688 aa4.48□□□□□ -1.69
AVT1YJR001W PRP16P15938 1071 aaPredicted RBP4.48□□□□□ -1.69
AVT1YJR001W FUS3P16892 353 aaKnown RBP4.48□□□□□ -1.69
AVT1YJR001W EFT1P32324 842 aaKnown RBP4.48□□□□□ -1.69
AVT1YJR001W CHK1P38147 527 aa4.48□□□□□ -1.69
AVT1YJR001W MMS4P38257 691 aa4.48□□□□□ -1.69
AVT1YJR001W TSL1P38427 1098 aaKnown RBP4.48□□□□□ -1.69
AVT1YJR001W RFC3P38629 340 aa4.48□□□□□ -1.69
AVT1YJR001W MPT5P39016 859 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
AVT1YJR001W SSN3P39073 555 aa4.48□□□□□ -1.69
AVT1YJR001W YEL076CP39971 216 aa4.48□□□□□ -1.69
AVT1YJR001W EDC3P39998 551 aaKnown RBP4.48□□□□□ -1.69
AVT1YJR001W VMA13P41807 478 aaKnown RBP4.48□□□□□ -1.69
AVT1YJR001W YDL183CP48569 320 aa4.48□□□□□ -1.69
AVT1YJR001W STB4P50104 949 aa4.48□□□□□ -1.69
AVT1YJR001W PDR8Q06149 701 aa4.48□□□□□ -1.69
AVT1YJR001W VAC14Q06708 880 aa4.48□□□□□ -1.69
AVT1YJR001W GRS2Q06817 618 aa4.48□□□□□ -1.69
AVT1YJR001W RCN2Q12044 265 aa4.48□□□□□ -1.69
AVT1YJR001W YBR182C-AQ8TGU6 64 aa4.48□□□□□ -1.69
AVT1YJR001W YOR111WQ99210 232 aa4.48□□□□□ -1.69
AVT1YJR001W PDR18P53756 1333 aa4.48□□□□□ -1.69
AVT1YJR001W PET122P10355 254 aa4.47□□□□□ -1.69
AVT1YJR001W CBS1P14066 229 aa4.47□□□□□ -1.69
AVT1YJR001W CAD1P24813 409 aaKnown RBP4.47□□□□□ -1.69
AVT1YJR001W PEP3P27801 918 aa4.47□□□□□ -1.69
AVT1YJR001W ERV1P27882 189 aa4.47□□□□□ -1.69
AVT1YJR001W DGR2P32330 852 aa4.47□□□□□ -1.69
AVT1YJR001W FRD1P32614 470 aaKnown RBP4.47□□□□□ -1.69
AVT1YJR001W GDH2P33327 1092 aaKnown RBP4.47□□□□□ -1.69
AVT1YJR001W SEC66P33754 206 aa4.47□□□□□ -1.69
AVT1YJR001W SRL3P36167 246 aa4.47□□□□□ -1.69
AVT1YJR001W SRO77P38163 1010 aa4.47□□□□□ -1.69
AVT1YJR001W YBL086CP38177 466 aa4.47□□□□□ -1.69
AVT1YJR001W NTC20P38302 140 aaPredicted RBP4.47□□□□□ -1.69
AVT1YJR001W SIP3P38717 1229 aa4.47□□□□□ -1.69
AVT1YJR001W MNL1P38888 796 aa4.47□□□□□ -1.69
AVT1YJR001W PRM9P39551 298 aa4.47□□□□□ -1.69
AVT1YJR001W SSP120P39931 234 aaKnown RBP4.47□□□□□ -1.69
AVT1YJR001W DLD3P39976 496 aaKnown RBP4.47□□□□□ -1.69
AVT1YJR001W THO1P40040 218 aaKnown RBP4.47□□□□□ -1.69
AVT1YJR001W JLP2P40206 208 aa4.47□□□□□ -1.69
AVT1YJR001W YIL077CP40508 320 aa4.47□□□□□ -1.69
AVT1YJR001W MND2P40577 368 aa4.47□□□□□ -1.69
AVT1YJR001W MNT2P53059 558 aa4.47□□□□□ -1.69
AVT1YJR001W KAP120Q02932 1032 aa4.47□□□□□ -1.69
AVT1YJR001W SML1Q04964 104 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms