RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W PDR8Q06149 701 aa2.49□□□□□ -2.01
RPL40AYIL148W RAD34Q06665 692 aa2.49□□□□□ -2.01
RPL40AYIL148W VIP1Q06685 1146 aaKnown RBP2.49□□□□□ -2.01
RPL40AYIL148W MCH4Q08268 501 aa2.49□□□□□ -2.01
RPL40AYIL148W TAH18Q12181 623 aa2.49□□□□□ -2.01
RPL40AYIL148W MED1Q12321 566 aa2.49□□□□□ -2.01
RPL40AYIL148W PGK1P00560 416 aaKnown RBP2.48□□□□□ -2.01
RPL40AYIL148W APN1P22936 367 aa2.48□□□□□ -2.01
RPL40AYIL148W ADH7P25377 361 aa2.48□□□□□ -2.01
RPL40AYIL148W PGS1P25578 521 aa2.48□□□□□ -2.01
RPL40AYIL148W CMK1P27466 446 aaKnown RBP2.48□□□□□ -2.01
RPL40AYIL148W COQ3P27680 312 aa2.48□□□□□ -2.01
RPL40AYIL148W MFT1P33441 392 aaKnown RBP2.48□□□□□ -2.01
RPL40AYIL148W OCT1P35999 772 aa2.48□□□□□ -2.01
RPL40AYIL148W STV1P37296 890 aa2.48□□□□□ -2.01
RPL40AYIL148W IMD2P38697 523 aaKnown RBP2.48□□□□□ -2.01
RPL40AYIL148W YNG2P38806 282 aaKnown RBP2.48□□□□□ -2.01
RPL40AYIL148W UIP3P39547 235 aa2.48□□□□□ -2.01
RPL40AYIL148W NDE1P40215 560 aa2.48□□□□□ -2.01
RPL40AYIL148W PKP1P40530 394 aa2.48□□□□□ -2.01
RPL40AYIL148W CIN1P40987 1014 aa2.48□□□□□ -2.01
RPL40AYIL148W MEP2P41948 499 aa2.48□□□□□ -2.01
RPL40AYIL148W SWP82P43554 623 aa2.48□□□□□ -2.01
RPL40AYIL148W NMD5P46970 1048 aa2.48□□□□□ -2.01
RPL40AYIL148W VPS25P47142 202 aa2.48□□□□□ -2.01
RPL40AYIL148W SRB7P47822 140 aa2.48□□□□□ -2.01
RPL40AYIL148W IMD3P50095 523 aaKnown RBP2.48□□□□□ -2.01
RPL40AYIL148W PIL1P53252 339 aaKnown RBP2.48□□□□□ -2.01
RPL40AYIL148W IDP3P53982 420 aaKnown RBP2.48□□□□□ -2.01
RPL40AYIL148W YML037CQ03703 340 aa2.48□□□□□ -2.01
RPL40AYIL148W GEP3Q08622 556 aa2.48□□□□□ -2.01
RPL40AYIL148W GPN2Q08726 347 aaPredicted RBP2.48□□□□□ -2.01
RPL40AYIL148W Q0010Q9ZZX9 128 aa2.48□□□□□ -2.01
RPL40AYIL148W PCT1P13259 424 aa2.47□□□□□ -2.01
RPL40AYIL148W KRS1P15180 591 aaKnown RBP2.47□□□□□ -2.01
RPL40AYIL148W YSP3P25036 478 aa2.47□□□□□ -2.01
RPL40AYIL148W SGF29P25554 259 aa2.47□□□□□ -2.01
RPL40AYIL148W POL4P25615 582 aa2.47□□□□□ -2.01
RPL40AYIL148W YIH1P25637 258 aa2.47□□□□□ -2.01
RPL40AYIL148W SAC1P32368 623 aaKnown RBP2.47□□□□□ -2.01
RPL40AYIL148W PDB1P32473 366 aaKnown RBP2.47□□□□□ -2.01
RPL40AYIL148W ICS2P38284 255 aa2.47□□□□□ -2.01
RPL40AYIL148W DIA4P38705 446 aaPredicted RBP2.47□□□□□ -2.01
RPL40AYIL148W ARN1P38731 627 aa2.47□□□□□ -2.01
RPL40AYIL148W FLC2P39719 783 aa2.47□□□□□ -2.01
RPL40AYIL148W RPN11P43588 306 aaKnown RBP2.47□□□□□ -2.01
RPL40AYIL148W YFR020WP43600 232 aa2.47□□□□□ -2.01
RPL40AYIL148W IRC8P47046 822 aa2.47□□□□□ -2.01
RPL40AYIL148W RPS7BP48164 190 aaKnown RBP2.47□□□□□ -2.01
RPL40AYIL148W UPF3P48412 387 aaKnown RBP2.47□□□□□ -2.01
RPL40AYIL148W VID30P53076 958 aa2.47□□□□□ -2.01
RPL40AYIL148W STR3P53101 465 aaKnown RBP2.47□□□□□ -2.01
RPL40AYIL148W YGR066CP53242 292 aa2.47□□□□□ -2.01
RPL40AYIL148W YPR003CP53394 754 aa2.47□□□□□ -2.01
RPL40AYIL148W INN1P53901 409 aa2.47□□□□□ -2.01
RPL40AYIL148W INA17Q02888 182 aa2.47□□□□□ -2.01
RPL40AYIL148W SWF1Q04629 336 aa2.47□□□□□ -2.01
RPL40AYIL148W ECM22Q05958 814 aaPredicted RBP2.47□□□□□ -2.01
RPL40AYIL148W CTI6Q08923 506 aa2.47□□□□□ -2.01
RPL40AYIL148W INP53Q12271 1107 aa2.47□□□□□ -2.01
RPL40AYIL148W PET111P08468 800 aa2.46□□□□□ -2.02
RPL40AYIL148W RPL19AP0CX82 189 aaKnown RBP2.46□□□□□ -2.02
RPL40AYIL148W RPL19BP0CX83 189 aaPredicted RBP2.46□□□□□ -2.02
RPL40AYIL148W CBS1P14066 229 aa2.46□□□□□ -2.02
RPL40AYIL148W SRP54P20424 541 aaKnown RBP2.46□□□□□ -2.02
RPL40AYIL148W RPB8P20436 146 aa2.46□□□□□ -2.02
RPL40AYIL148W MAK32P23060 363 aa2.46□□□□□ -2.02
RPL40AYIL148W TKL1P23254 680 aaKnown RBP2.46□□□□□ -2.02
RPL40AYIL148W OCA4P25366 362 aa2.46□□□□□ -2.02
RPL40AYIL148W GEX2P36173 615 aa2.46□□□□□ -2.02
RPL40AYIL148W DBP8P38719 431 aa2.46□□□□□ -2.02
RPL40AYIL148W UTP9P38882 575 aaKnown RBP2.46□□□□□ -2.02
RPL40AYIL148W PSA1P41940 361 aaKnown RBP2.46□□□□□ -2.02
RPL40AYIL148W YJL107CP42947 387 aa2.46□□□□□ -2.02
RPL40AYIL148W FAR3P46671 204 aa2.46□□□□□ -2.02
RPL40AYIL148W YGL036WP53185 909 aaPredicted RBP2.46□□□□□ -2.02
RPL40AYIL148W YNL234WP53857 426 aa2.46□□□□□ -2.02
RPL40AYIL148W MRPL19P53875 158 aa2.46□□□□□ -2.02
RPL40AYIL148W YMR178WQ03219 274 aaKnown RBP2.46□□□□□ -2.02
RPL40AYIL148W DPB4Q04603 196 aaKnown RBP2.46□□□□□ -2.02
RPL40AYIL148W YLR455WQ06188 304 aa2.46□□□□□ -2.02
RPL40AYIL148W FMP40Q08968 688 aaPredicted RBP2.46□□□□□ -2.02
RPL40AYIL148W NMD4Q12129 218 aa2.46□□□□□ -2.02
RPL40AYIL148W GET3Q12154 354 aaKnown RBP2.46□□□□□ -2.02
RPL40AYIL148W LEU9Q12166 604 aaKnown RBP2.46□□□□□ -2.02
RPL40AYIL148W RRI1Q12468 440 aa2.46□□□□□ -2.02
RPL40AYIL148W YLR111WQ12528 110 aa2.46□□□□□ -2.02
RPL40AYIL148W MF(ALPHA)1P01149 165 aa2.45□□□□□ -2.02
RPL40AYIL148W ARG81P05085 880 aa2.45□□□□□ -2.02
RPL40AYIL148W YMR085WP0CF18 432 aa2.45□□□□□ -2.02
RPL40AYIL148W EST1P17214 699 aaPredicted RBP2.45□□□□□ -2.02
RPL40AYIL148W FUR1P18562 216 aaKnown RBP2.45□□□□□ -2.02
RPL40AYIL148W YAP1P19880 650 aaKnown RBP2.45□□□□□ -2.02
RPL40AYIL148W SUI2P20459 304 aaKnown RBP2.45□□□□□ -2.02
RPL40AYIL148W SEF1P34228 1148 aa2.45□□□□□ -2.02
RPL40AYIL148W MUM2P38236 366 aa2.45□□□□□ -2.02
RPL40AYIL148W ERV46P39727 415 aa2.45□□□□□ -2.02
RPL40AYIL148W TPA1P40032 644 aaKnown RBP2.45□□□□□ -2.02
RPL40AYIL148W FMP10P40098 244 aa2.45□□□□□ -2.02
RPL40AYIL148W ALG5P40350 334 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms