RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W YJU3P28321 313 aa13.82□□□□□ -0.2
RPN10YHR200W YSC84P32793 468 aa13.82□□□□□ -0.2
RPN10YHR200W CSE1P33307 960 aa13.82□□□□□ -0.2
RPN10YHR200W YBR259WP38338 688 aa13.82□□□□□ -0.2
RPN10YHR200W GND1P38720 489 aaKnown RBP13.82□□□□□ -0.2
RPN10YHR200W UTP9P38882 575 aaKnown RBP13.82□□□□□ -0.2
RPN10YHR200W YHB1P39676 399 aaKnown RBP13.82□□□□□ -0.2
RPN10YHR200W REF2P42073 533 aaPredicted RBP13.82□□□□□ -0.2
RPN10YHR200W GLG2P47011 380 aa13.82□□□□□ -0.2
RPN10YHR200W ATH1P48016 1211 aa13.82□□□□□ -0.2
RPN10YHR200W RNR4P49723 345 aaKnown RBP13.82□□□□□ -0.2
RPN10YHR200W VEL1P53058 206 aa13.82□□□□□ -0.2
RPN10YHR200W CCE1Q03702 353 aa13.82□□□□□ -0.2
RPN10YHR200W CRN1Q06440 651 aa13.82□□□□□ -0.2
RPN10YHR200W YOL019WQ08157 551 aa13.82□□□□□ -0.2
RPN10YHR200W ALR1Q08269 859 aa13.82□□□□□ -0.2
RPN10YHR200W BUD7Q08754 746 aa13.82□□□□□ -0.2
RPN10YHR200W TMA46Q12000 345 aaKnown RBP13.82□□□□□ -0.2
RPN10YHR200W UBA1P22515 1024 aaKnown RBP13.81□□□□□ -0.2
RPN10YHR200W MUP3P38734 546 aa13.81□□□□□ -0.2
RPN10YHR200W FRT2P39734 528 aa13.81□□□□□ -0.2
RPN10YHR200W MEP1P40260 492 aa13.81□□□□□ -0.2
RPN10YHR200W NUP84P52891 726 aa13.81□□□□□ -0.2
RPN10YHR200W YDR131CQ03899 556 aa13.81□□□□□ -0.2
RPN10YHR200W NSE1Q07913 336 aa13.81□□□□□ -0.2
RPN10YHR200W YOR012WQ12351 137 aa13.81□□□□□ -0.2
RPN10YHR200W SEC15P22224 910 aa13.8□□□□□ -0.2
RPN10YHR200W MVD1P32377 396 aaKnown RBP13.8□□□□□ -0.2
RPN10YHR200W SPS19P32573 292 aaKnown RBP13.8□□□□□ -0.2
RPN10YHR200W STE5P32917 917 aa13.8□□□□□ -0.2
RPN10YHR200W PRP18P33411 251 aaPredicted RBP13.8□□□□□ -0.2
RPN10YHR200W YKL100CP34248 587 aa13.8□□□□□ -0.2
RPN10YHR200W RFC3P38629 340 aa13.8□□□□□ -0.2
RPN10YHR200W ERP5P38819 212 aa13.8□□□□□ -0.2
RPN10YHR200W SHU2P38957 223 aa13.8□□□□□ -0.2
RPN10YHR200W RLP7P40693 322 aaKnown RBP13.8□□□□□ -0.2
RPN10YHR200W UBP6P43593 499 aaKnown RBP13.8□□□□□ -0.2
RPN10YHR200W TMA22P47089 198 aaPredicted RBP13.8□□□□□ -0.2
RPN10YHR200W SLM2P53955 656 aa13.8□□□□□ -0.2
RPN10YHR200W OSH6Q02201 448 aa13.8□□□□□ -0.2
RPN10YHR200W FMN1Q03778 218 aa13.8□□□□□ -0.2
RPN10YHR200W SPO20Q04359 397 aa13.8□□□□□ -0.2
RPN10YHR200W GTB1Q04924 702 aa13.8□□□□□ -0.2
RPN10YHR200W YPL225WQ08971 146 aaKnown RBP13.8□□□□□ -0.2
RPN10YHR200W APC9Q12107 265 aa13.8□□□□□ -0.2
RPN10YHR200W UBX3Q12229 455 aa13.8□□□□□ -0.2
RPN10YHR200W ATG34Q12292 412 aa13.8□□□□□ -0.2
RPN10YHR200W CET1O13297 549 aaPredicted RBP13.79□□□□□ -0.2
RPN10YHR200W RAD3P06839 778 aa13.79□□□□□ -0.2
RPN10YHR200W SEC53P07283 254 aaKnown RBP13.79□□□□□ -0.2
RPN10YHR200W ARG1P22768 420 aa13.79□□□□□ -0.2
RPN10YHR200W NPP1P25353 742 aa13.79□□□□□ -0.2
RPN10YHR200W BRF1P29056 596 aa13.79□□□□□ -0.2
RPN10YHR200W CTP1P38152 299 aa13.79□□□□□ -0.2
RPN10YHR200W EFM1P38732 585 aa13.79□□□□□ -0.2
RPN10YHR200W MGS1P40151 587 aa13.79□□□□□ -0.2
RPN10YHR200W IRR1P40541 1150 aa13.79□□□□□ -0.2
RPN10YHR200W YFR018CP43599 363 aa13.79□□□□□ -0.2
RPN10YHR200W NNF1P47149 201 aa13.79□□□□□ -0.2
RPN10YHR200W EFM5P53200 248 aaKnown RBP13.79□□□□□ -0.2
RPN10YHR200W CLD1P53264 445 aa13.79□□□□□ -0.2
RPN10YHR200W LSM3P57743 89 aaKnown RBP13.79□□□□□ -0.2
RPN10YHR200W NPL3Q01560 414 aaKnown RBP RIP-Chip data13.79□□□□□ -0.2 RIP-Chip
RPN10YHR200W LGE1Q02796 332 aaKnown RBP13.79□□□□□ -0.2
RPN10YHR200W ICT1Q12385 394 aa13.79□□□□□ -0.2
RPN10YHR200W YOL087CQ99247 1116 aa13.79□□□□□ -0.2
RPN10YHR200W MSF1P08425 469 aa13.78□□□□□ -0.2
RPN10YHR200W PMR1P13586 950 aa13.78□□□□□ -0.2
RPN10YHR200W RSR1P13856 272 aa13.78□□□□□ -0.2
RPN10YHR200W YDR089WP38966 869 aa13.78□□□□□ -0.2
RPN10YHR200W AIF1P52923 378 aa13.78□□□□□ -0.2
RPN10YHR200W YNR014WP53719 212 aa13.78□□□□□ -0.2
RPN10YHR200W RMI1Q02685 241 aa13.78□□□□□ -0.2
RPN10YHR200W JIP5Q06214 492 aaPredicted RBP13.78□□□□□ -0.2
RPN10YHR200W YDL121CQ07541 149 aa13.78□□□□□ -0.2
RPN10YHR200W HBT1Q07653 1046 aaKnown RBP13.78□□□□□ -0.2
RPN10YHR200W AHA1Q12449 350 aaKnown RBP13.78□□□□□ -0.2
RPN10YHR200W KEX2P13134 814 aa13.77□□□□□ -0.21
RPN10YHR200W MRM1P25270 412 aa13.77□□□□□ -0.21
RPN10YHR200W PPZ1P26570 692 aa13.77□□□□□ -0.21
RPN10YHR200W SSE1P32589 693 aaKnown RBP13.77□□□□□ -0.21
RPN10YHR200W PTH2P34222 208 aa13.77□□□□□ -0.21
RPN10YHR200W SKT5P34226 696 aa13.77□□□□□ -0.21
RPN10YHR200W FZO1P38297 855 aa13.77□□□□□ -0.21
RPN10YHR200W SEC31P38968 1273 aaKnown RBP13.77□□□□□ -0.21
RPN10YHR200W RMD8P43620 662 aa13.77□□□□□ -0.21
RPN10YHR200W EMC4P53073 190 aa13.77□□□□□ -0.21
RPN10YHR200W SWC4P53201 476 aa13.77□□□□□ -0.21
RPN10YHR200W IBD2P53892 351 aa13.77□□□□□ -0.21
RPN10YHR200W VAC7P53950 1165 aa13.77□□□□□ -0.21
RPN10YHR200W MAP1Q01662 387 aaKnown RBP RIP-Chip data13.77□□□□□ -0.21not detected
RPN10YHR200W RNY1Q02933 434 aaKnown RBP13.77□□□□□ -0.21
RPN10YHR200W CLU1Q03690 1277 aaKnown RBP13.77□□□□□ -0.21
RPN10YHR200W HDA3Q06623 655 aa13.77□□□□□ -0.21
RPN10YHR200W RPS14AP06367 137 aaKnown RBP13.76□□□□□ -0.21
RPN10YHR200W PTM1P32857 523 aa13.76□□□□□ -0.21
RPN10YHR200W TIP20P33891 701 aa13.76□□□□□ -0.21
RPN10YHR200W PHO11P35842 467 aa13.76□□□□□ -0.21
RPN10YHR200W PHO12P38693 467 aa13.76□□□□□ -0.21
RPN10YHR200W RPS14BP39516 138 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms