RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W TRS130Q03660 1102 aa3.13□□□□□ -1.91
RPF1YHR088W CRN1Q06440 651 aa3.13□□□□□ -1.91
RPF1YHR088W BRE1Q07457 700 aaKnown RBP3.13□□□□□ -1.91
RPF1YHR088W YEH2Q07950 538 aa3.13□□□□□ -1.91
RPF1YHR088W MIA40P36046 403 aa3.12□□□□□ -1.91
RPF1YHR088W ECM10P39987 644 aa3.12□□□□□ -1.91
RPF1YHR088W TAN1P53072 289 aaPredicted RBP3.12□□□□□ -1.91
RPF1YHR088W BOR1P53838 576 aa3.12□□□□□ -1.91
RPF1YHR088W IST1P53843 298 aaPredicted RBP3.12□□□□□ -1.91
RPF1YHR088W HCR1Q05775 265 aaKnown RBP3.12□□□□□ -1.91
RPF1YHR088W RRP6Q12149 733 aaKnown RBP3.12□□□□□ -1.91
RPF1YHR088W NCP1P16603 691 aaKnown RBP3.11□□□□□ -1.91
RPF1YHR088W SWI4P25302 1093 aaKnown RBP3.11□□□□□ -1.91
RPF1YHR088W ERG1P32476 496 aaKnown RBP3.11□□□□□ -1.91
RPF1YHR088W TFC3P34111 1160 aa3.11□□□□□ -1.91
RPF1YHR088W SPC34P36131 295 aa3.11□□□□□ -1.91
RPF1YHR088W FAA2P39518 744 aa3.11□□□□□ -1.91
RPF1YHR088W YTA12P40341 825 aa3.11□□□□□ -1.91
RPF1YHR088W VPS27P40343 622 aaKnown RBP3.11□□□□□ -1.91
RPF1YHR088W ERR3P42222 437 aa3.11□□□□□ -1.91
RPF1YHR088W YPI1P43587 155 aa3.11□□□□□ -1.91
RPF1YHR088W GUF1P46943 645 aa3.11□□□□□ -1.91
RPF1YHR088W SMC3P47037 1230 aa3.11□□□□□ -1.91
RPF1YHR088W YTP1P53584 459 aa3.11□□□□□ -1.91
RPF1YHR088W RSM28Q03430 361 aa3.11□□□□□ -1.91
RPF1YHR088W TMA64Q04600 565 aaKnown RBP3.11□□□□□ -1.91
RPF1YHR088W YDL218WQ07629 317 aa3.11□□□□□ -1.91
RPF1YHR088W ARP6Q12509 438 aa3.11□□□□□ -1.91
RPF1YHR088W SAN1P22470 610 aa3.1□□□□□ -1.91
RPF1YHR088W TIF3P34167 436 aaKnown RBP3.1□□□□□ -1.91
RPF1YHR088W NPR3P38742 1146 aa3.1□□□□□ -1.91
RPF1YHR088W YDL186WP48568 277 aa3.1□□□□□ -1.91
RPF1YHR088W ASE1P50275 885 aa3.1□□□□□ -1.91
RPF1YHR088W TGL2P54857 326 aa3.1□□□□□ -1.91
RPF1YHR088W ATP2P00830 511 aaKnown RBP3.09□□□□□ -1.91
RPF1YHR088W SSB1P11484 613 aaKnown RBP3.09□□□□□ -1.91
RPF1YHR088W CDC15P27636 974 aa3.09□□□□□ -1.91
RPF1YHR088W SWH1P35845 1188 aa3.09□□□□□ -1.91
RPF1YHR088W MRPL36P36531 177 aa3.09□□□□□ -1.91
RPF1YHR088W SSB2P40150 613 aaKnown RBP3.09□□□□□ -1.91
RPF1YHR088W CSL4P53859 292 aaPredicted RBP3.09□□□□□ -1.91
RPF1YHR088W NUP100Q02629 959 aa3.09□□□□□ -1.91
RPF1YHR088W RPM2Q02773 1202 aa3.09□□□□□ -1.91
RPF1YHR088W MLC2Q06580 163 aa3.09□□□□□ -1.91
RPF1YHR088W TMA7Q3E764 64 aaKnown RBP3.09□□□□□ -1.91
RPF1YHR088W MRS3P10566 314 aa3.08□□□□□ -1.92
RPF1YHR088W SRB5P32585 307 aa3.08□□□□□ -1.92
RPF1YHR088W LOS1P33418 1100 aaPredicted RBP3.08□□□□□ -1.92
RPF1YHR088W PKP1P40530 394 aa3.08□□□□□ -1.92
RPF1YHR088W SWP82P43554 623 aa3.08□□□□□ -1.92
RPF1YHR088W YGL082WP53155 381 aa3.08□□□□□ -1.92
RPF1YHR088W ERP1Q05359 219 aaKnown RBP3.08□□□□□ -1.92
RPF1YHR088W STP3Q05937 343 aa3.08□□□□□ -1.92
RPF1YHR088W YOL159CQ08300 171 aa3.08□□□□□ -1.92
RPF1YHR088W YLL056CQ12177 298 aa3.08□□□□□ -1.92
RPF1YHR088W CLB4P24871 460 aa3.07□□□□□ -1.92
RPF1YHR088W YNK1P36010 153 aaKnown RBP3.07□□□□□ -1.92
RPF1YHR088W PHD1P36093 366 aa3.07□□□□□ -1.92
RPF1YHR088W MRPL4P36517 319 aa3.07□□□□□ -1.92
RPF1YHR088W SPC72P39723 622 aa3.07□□□□□ -1.92
RPF1YHR088W ADD37Q03233 198 aa3.07□□□□□ -1.92
RPF1YHR088W LDB16P25587 256 aa3.06□□□□□ -1.92
RPF1YHR088W ESL2P36168 1195 aa3.06□□□□□ -1.92
RPF1YHR088W YJL213WP40896 331 aa3.06□□□□□ -1.92
RPF1YHR088W SPG5P42933 373 aa3.06□□□□□ -1.92
RPF1YHR088W ATG26Q06321 1198 aa3.06□□□□□ -1.92
RPF1YHR088W HXK2P04807 486 aaKnown RBP3.05□□□□□ -1.92
RPF1YHR088W GDH1P07262 454 aaKnown RBP3.05□□□□□ -1.92
RPF1YHR088W MSS18P08593 268 aa3.05□□□□□ -1.92
RPF1YHR088W CMK1P27466 446 aaKnown RBP3.05□□□□□ -1.92
RPF1YHR088W YBR138CP38277 524 aa3.05□□□□□ -1.92
RPF1YHR088W PUG1P40100 303 aa3.05□□□□□ -1.92
RPF1YHR088W YIL060WP40519 144 aa3.05□□□□□ -1.92
RPF1YHR088W IKS1P47042 667 aa3.05□□□□□ -1.92
RPF1YHR088W CTF18P49956 741 aa3.05□□□□□ -1.92
RPF1YHR088W COS10P52924 374 aa3.05□□□□□ -1.92
RPF1YHR088W NNF2P53253 936 aa3.05□□□□□ -1.92
RPF1YHR088W SOL4P53315 255 aa3.05□□□□□ -1.92
RPF1YHR088W TDA7P53882 636 aaPredicted RBP3.05□□□□□ -1.92
RPF1YHR088W MOT3P54785 490 aaKnown RBP3.05□□□□□ -1.92
RPF1YHR088W MSS11Q03825 758 aa3.05□□□□□ -1.92
RPF1YHR088W APL4Q12028 832 aa3.05□□□□□ -1.92
RPF1YHR088W ERG27Q12452 347 aaKnown RBP3.05□□□□□ -1.92
RPF1YHR088W RPL15AP05748 204 aaKnown RBP3.04□□□□□ -1.92
RPF1YHR088W TYR1P20049 452 aa3.04□□□□□ -1.92
RPF1YHR088W ACH1P32316 526 aa3.04□□□□□ -1.92
RPF1YHR088W YER130CP39959 443 aa3.04□□□□□ -1.92
RPF1YHR088W YEL068CP39977 110 aa3.04□□□□□ -1.92
RPF1YHR088W HIS6P40545 261 aa3.04□□□□□ -1.92
RPF1YHR088W YFR020WP43600 232 aa3.04□□□□□ -1.92
RPF1YHR088W PAP2P53632 584 aaKnown RBP3.04□□□□□ -1.92
RPF1YHR088W MPD2Q99316 277 aa3.04□□□□□ -1.92
RPF1YHR088W MTF1P14908 341 aaKnown RBP3.03□□□□□ -1.92
RPF1YHR088W PTP2P29461 750 aa3.03□□□□□ -1.92
RPF1YHR088W MCM4P30665 933 aaKnown RBP3.03□□□□□ -1.92
RPF1YHR088W SNC1P31109 117 aa3.03□□□□□ -1.92
RPF1YHR088W YKL050CP35736 922 aa3.03□□□□□ -1.92
RPF1YHR088W RRT2P38332 387 aa3.03□□□□□ -1.92
RPF1YHR088W RPH1P39956 796 aa3.03□□□□□ -1.92
RPF1YHR088W RTT101P47050 842 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms