RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	MOT3	P54785	490 aa	Known RBP	1.73	□□□□□ -2.13
SCW11	YGL028C	IWR1	Q07532	353 aa	Predicted RBP	1.73	□□□□□ -2.13
SCW11	YGL028C	RRP6	Q12149	733 aa	Known RBP	1.73	□□□□□ -2.13
SCW11	YGL028C	SRP54	P20424	541 aa	Known RBP	1.72	□□□□□ -2.13
SCW11	YGL028C	LDB16	P25587	256 aa		1.72	□□□□□ -2.13
SCW11	YGL028C	MIC60	P36112	540 aa		1.72	□□□□□ -2.13
SCW11	YGL028C	YHL041W	P38730	149 aa		1.72	□□□□□ -2.13
SCW11	YGL028C	YTP1	P53584	459 aa		1.72	□□□□□ -2.13
SCW11	YGL028C	TEP1	P53916	434 aa		1.72	□□□□□ -2.13
SCW11	YGL028C	MAK10	Q02197	733 aa		1.72	□□□□□ -2.13
SCW11	YGL028C	BSC6	Q08280	497 aa		1.72	□□□□□ -2.13
SCW11	YGL028C	SWT1	Q12104	458 aa		1.72	□□□□□ -2.13
SCW11	YGL028C	YLL056C	Q12177	298 aa		1.72	□□□□□ -2.13
SCW11	YGL028C	GDH1	P07262	454 aa	Known RBP	1.71	□□□□□ -2.14
SCW11	YGL028C	MRS3	P10566	314 aa		1.71	□□□□□ -2.14
SCW11	YGL028C	ERG1	P32476	496 aa	Known RBP	1.71	□□□□□ -2.14
SCW11	YGL028C	SOF1	P33750	489 aa	Known RBP	1.71	□□□□□ -2.14
SCW11	YGL028C	IES5	P40060	125 aa		1.71	□□□□□ -2.14
SCW11	YGL028C	HIS6	P40545	261 aa		1.71	□□□□□ -2.14
SCW11	YGL028C	SPG5	P42933	373 aa		1.71	□□□□□ -2.14
SCW11	YGL028C	CTK2	P46962	323 aa		1.71	□□□□□ -2.14
SCW11	YGL028C	CPR6	P53691	371 aa	Known RBP	1.71	□□□□□ -2.14
SCW11	YGL028C	UBX4	P54730	416 aa		1.71	□□□□□ -2.14
SCW11	YGL028C	TMA64	Q04600	565 aa	Known RBP	1.71	□□□□□ -2.14
SCW11	YGL028C	CRN1	Q06440	651 aa		1.71	□□□□□ -2.14
SCW11	YGL028C	KRS1	P15180	591 aa	Known RBP	1.7	□□□□□ -2.14
SCW11	YGL028C	YEF3	P16521	1044 aa	Known RBP	1.7	□□□□□ -2.14
SCW11	YGL028C	CLB2	P24869	491 aa		1.7	□□□□□ -2.14
SCW11	YGL028C	SPC72	P39723	622 aa		1.7	□□□□□ -2.14
SCW11	YGL028C	RGI2	P40188	164 aa		1.7	□□□□□ -2.14
SCW11	YGL028C	YIL060W	P40519	144 aa		1.7	□□□□□ -2.14
SCW11	YGL028C	YPI1	P43587	155 aa		1.7	□□□□□ -2.14
SCW11	YGL028C	NUP100	Q02629	959 aa		1.7	□□□□□ -2.14
SCW11	YGL028C	CIA1	Q05583	330 aa		1.7	□□□□□ -2.14
SCW11	YGL028C	NYV1	Q12255	253 aa		1.7	□□□□□ -2.14
SCW11	YGL028C	MIS1	P09440	975 aa	Known RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	BIK1	P11709	440 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	APA1	P16550	321 aa	Known RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	APM3	P38153	483 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	RRT2	P38332	387 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	RRP3	P38712	501 aa	Known RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	YIL161W	P40449	235 aa	Known RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	GUF1	P46943	645 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	IMA1	P53051	589 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	TAN1	P53072	289 aa	Predicted RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	PAP2	P53632	584 aa	Known RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	TDA7	P53882	636 aa	Predicted RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	RPS2	P25443	254 aa	Known RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	AGA1	P32323	725 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	LOS1	P33418	1100 aa	Predicted RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	VPS24	P36095	224 aa	Known RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	NTR2	P36118	322 aa	Predicted RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	AAP1	P37898	856 aa	Known RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	FSH1	P38777	243 aa	Known RBP	1.69	□□□□□ -2.14
SCW11	YGL028C	ACA1	P39970	489 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	YJL213W	P40896	331 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	ERR3	P42222	437 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	IKS1	P47042	667 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	YDL186W	P48568	277 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	RSM28	Q03430	361 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	TFC6	Q06339	672 aa		1.69	□□□□□ -2.14
SCW11	YGL028C	RPL15A	P05748	204 aa	Known RBP	1.68	□□□□□ -2.14
SCW11	YGL028C	NCP1	P16603	691 aa	Known RBP	1.68	□□□□□ -2.14
SCW11	YGL028C	MSM1	P22438	575 aa		1.68	□□□□□ -2.14
SCW11	YGL028C	PWP2	P25635	923 aa	Known RBP	1.68	□□□□□ -2.14
SCW11	YGL028C	DBF20	P32328	564 aa		1.68	□□□□□ -2.14
SCW11	YGL028C	NUP120	P35729	1037 aa		1.68	□□□□□ -2.14
SCW11	YGL028C	FUI1	P38196	639 aa		1.68	□□□□□ -2.14
SCW11	YGL028C	ECM10	P39987	644 aa		1.68	□□□□□ -2.14
SCW11	YGL028C	PUG1	P40100	303 aa		1.68	□□□□□ -2.14
SCW11	YGL028C	YJL132W	P47014	750 aa		1.68	□□□□□ -2.14
SCW11	YGL028C	RTS3	P53289	263 aa		1.68	□□□□□ -2.14
SCW11	YGL028C	HIM1	Q06674	414 aa		1.68	□□□□□ -2.14
SCW11	YGL028C	YEH2	Q07950	538 aa		1.68	□□□□□ -2.14
SCW11	YGL028C	YOL159C	Q08300	171 aa		1.68	□□□□□ -2.14
SCW11	YGL028C	ATP2	P00830	511 aa	Known RBP	1.67	□□□□□ -2.14
SCW11	YGL028C	MTF2	P10849	440 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	SPO16	P17122	198 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	MCK1	P21965	375 aa	Known RBP	1.67	□□□□□ -2.14
SCW11	YGL028C	YCL049C	P25577	312 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	MCM4	P30665	933 aa	Known RBP	1.67	□□□□□ -2.14
SCW11	YGL028C	ATS1	P31386	333 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	PHD1	P36093	366 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	GEX2	P36173	615 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	YBR138C	P38277	524 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	YBP1	P38315	674 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	PHO90	P39535	881 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	YER130C	P39959	443 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	SWP82	P43554	623 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	YFR016C	P43597	1233 aa	Known RBP	1.67	□□□□□ -2.14
SCW11	YGL028C	YFR020W	P43600	232 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	YGL242C	P53066	181 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	PKP2	P53170	491 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	ARC35	P53731	342 aa	Known RBP	1.67	□□□□□ -2.14
SCW11	YGL028C	APJ1	P53940	528 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	ATG16	Q03818	150 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	FMP45	Q07651	309 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	RDR1	Q08904	546 aa		1.67	□□□□□ -2.14
SCW11	YGL028C	PHO81	P17442	1178 aa		1.66	□□□□□ -2.14
SCW11	YGL028C	GAC1	P28006	793 aa		1.66	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms