RNA–Protein interactions for RNA: YEL004W

YEA4, Transcript of Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter, yeast

Gene YEA4, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEA4	YEL004W	COG1	P53079	417 aa		3.9	□□□□□ -1.79
YEA4	YEL004W	TMA16	Q08687	178 aa		3.9	□□□□□ -1.79
YEA4	YEL004W	NUC1	P08466	329 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	TY2A-LR1	P0C2J4	438 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	TY2A-F	P0CX61	438 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	TY2A-GR2	P0CX62	438 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	PRP16	P15938	1071 aa	Predicted RBP	3.89	□□□□□ -1.79
YEA4	YEL004W	TY2A-C	P25383	438 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	YCL049C	P25577	312 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	TFC3	P34111	1160 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	STV1	P37296	890 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	ACA1	P39970	489 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	RTS2	P40962	232 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	FET5	P43561	622 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	ROK1	P45818	564 aa	Predicted RBP	3.89	□□□□□ -1.79
YEA4	YEL004W	YTP1	P53584	459 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	MAK10	Q02197	733 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	TY2A-DR2	Q03483	438 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	YDR415C	Q04033	374 aa	Predicted RBP	3.89	□□□□□ -1.79
YEA4	YEL004W	TY2A-B	Q12260	438 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	TY2A-OR2	Q12293	438 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	TY2A-DR1	Q12392	438 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	TY2A-OR1	Q12439	438 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	TY2A-DR3	Q99303	438 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	EDE1	P34216	1381 aa		3.89	□□□□□ -1.79
YEA4	YEL004W	TPK1	P06244	397 aa		3.88	□□□□□ -1.79
YEA4	YEL004W	MSM1	P22438	575 aa		3.88	□□□□□ -1.79
YEA4	YEL004W	SRB5	P32585	307 aa		3.88	□□□□□ -1.79
YEA4	YEL004W	MRPL13	Q02204	264 aa		3.88	□□□□□ -1.79
YEA4	YEL004W	FCP1	Q03254	732 aa		3.88	□□□□□ -1.79
YEA4	YEL004W	RSA1	Q08932	381 aa		3.88	□□□□□ -1.79
YEA4	YEL004W	PGI1	P12709	554 aa	Known RBP	3.87	□□□□□ -1.79
YEA4	YEL004W	YIR014W	P40570	242 aa		3.87	□□□□□ -1.79
YEA4	YEL004W	YFR020W	P43600	232 aa		3.87	□□□□□ -1.79
YEA4	YEL004W	ERG27	Q12452	347 aa	Known RBP	3.87	□□□□□ -1.79
YEA4	YEL004W	PCD1	Q12524	340 aa		3.87	□□□□□ -1.79
YEA4	YEL004W	CSR2	Q12734	1121 aa		3.87	□□□□□ -1.79
YEA4	YEL004W	GLN3	P18494	730 aa		3.86	□□□□□ -1.79
YEA4	YEL004W	SAN1	P22470	610 aa		3.86	□□□□□ -1.79
YEA4	YEL004W	GID7	P25569	745 aa		3.86	□□□□□ -1.79
YEA4	YEL004W	CDC15	P27636	974 aa		3.86	□□□□□ -1.79
YEA4	YEL004W	ESL2	P36168	1195 aa		3.86	□□□□□ -1.79
YEA4	YEL004W	IST3	P40565	148 aa	Predicted RBP	3.86	□□□□□ -1.79
YEA4	YEL004W	AZF1	P41696	914 aa		3.86	□□□□□ -1.79
YEA4	YEL004W	ARC35	P53731	342 aa	Known RBP	3.86	□□□□□ -1.79
YEA4	YEL004W	YDL218W	Q07629	317 aa		3.86	□□□□□ -1.79
YEA4	YEL004W	PRO3	P32263	286 aa	Known RBP	3.85	□□□□□ -1.79
YEA4	YEL004W	YHR218W	P38899	603 aa		3.85	□□□□□ -1.79
YEA4	YEL004W	PFK26	P40433	827 aa	Known RBP	3.85	□□□□□ -1.79
YEA4	YEL004W	IST1	P53843	298 aa	Predicted RBP	3.85	□□□□□ -1.79
YEA4	YEL004W	SMA2	Q04658	369 aa		3.85	□□□□□ -1.79
YEA4	YEL004W	CIA1	Q05583	330 aa		3.85	□□□□□ -1.79
YEA4	YEL004W	TLG2	Q08144	397 aa		3.85	□□□□□ -1.79
YEA4	YEL004W	MTF2	P10849	440 aa		3.84	□□□□□ -1.79
YEA4	YEL004W	UBC1	P21734	215 aa	Known RBP	3.84	□□□□□ -1.79
YEA4	YEL004W	CPR3	P25719	182 aa		3.84	□□□□□ -1.79
YEA4	YEL004W	RAD16	P31244	790 aa		3.84	□□□□□ -1.79
YEA4	YEL004W	RGI2	P40188	164 aa		3.84	□□□□□ -1.79
YEA4	YEL004W	YIL060W	P40519	144 aa		3.84	□□□□□ -1.79
YEA4	YEL004W	NNF2	P53253	936 aa		3.84	□□□□□ -1.79
YEA4	YEL004W	YMR178W	Q03219	274 aa	Known RBP	3.84	□□□□□ -1.79
YEA4	YEL004W	BLS1	Q06071	122 aa		3.84	□□□□□ -1.79
YEA4	YEL004W	HXK2	P04807	486 aa	Known RBP	3.83	□□□□□ -1.8
YEA4	YEL004W	GAC1	P28006	793 aa		3.83	□□□□□ -1.8
YEA4	YEL004W	MIA40	P36046	403 aa		3.83	□□□□□ -1.8
YEA4	YEL004W	IFA38	P38286	347 aa		3.83	□□□□□ -1.8
YEA4	YEL004W	ERG7	P38604	731 aa		3.83	□□□□□ -1.8
YEA4	YEL004W	CSR1	Q06705	408 aa	Known RBP	3.83	□□□□□ -1.8
YEA4	YEL004W	APA1	P16550	321 aa	Known RBP	3.82	□□□□□ -1.8
YEA4	YEL004W	PHO90	P39535	881 aa		3.82	□□□□□ -1.8
YEA4	YEL004W	PKP1	P40530	394 aa		3.82	□□□□□ -1.8
YEA4	YEL004W	SMC3	P47037	1230 aa		3.82	□□□□□ -1.8
YEA4	YEL004W	UBX4	P54730	416 aa		3.82	□□□□□ -1.8
YEA4	YEL004W	NUP100	Q02629	959 aa		3.82	□□□□□ -1.8
YEA4	YEL004W	PSR2	Q07949	397 aa		3.82	□□□□□ -1.8
YEA4	YEL004W	VCX1	Q99385	411 aa		3.82	□□□□□ -1.8
YEA4	YEL004W	MRS3	P10566	314 aa		3.81	□□□□□ -1.8
YEA4	YEL004W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.81	□□□□□ -1.8	not detected
YEA4	YEL004W	ERG8	P24521	451 aa		3.81	□□□□□ -1.8
YEA4	YEL004W	MIC60	P36112	540 aa		3.81	□□□□□ -1.8
YEA4	YEL004W	AVT5	P38176	459 aa		3.81	□□□□□ -1.8
YEA4	YEL004W	CTF18	P49956	741 aa		3.81	□□□□□ -1.8
YEA4	YEL004W	YOL057W	Q08225	711 aa		3.81	□□□□□ -1.8
YEA4	YEL004W	XRS2	P33301	854 aa		3.8	□□□□□ -1.8
YEA4	YEL004W	RTS1	P38903	757 aa		3.8	□□□□□ -1.8
YEA4	YEL004W	SMK1	P41808	388 aa		3.8	□□□□□ -1.8
YEA4	YEL004W	DPB11	P47027	764 aa	Predicted RBP	3.8	□□□□□ -1.8
YEA4	YEL004W	REG1	Q00816	1014 aa		3.8	□□□□□ -1.8
YEA4	YEL004W	ATG26	Q06321	1198 aa		3.8	□□□□□ -1.8
YEA4	YEL004W	YOR019W	Q99248	730 aa		3.8	□□□□□ -1.8
YEA4	YEL004W	YJR061W	P40355	935 aa		3.79	□□□□□ -1.8
YEA4	YEL004W	YJL068C	P40363	299 aa		3.79	□□□□□ -1.8
YEA4	YEL004W	DIM1	P41819	318 aa	Known RBP	3.79	□□□□□ -1.8
YEA4	YEL004W	PKP2	P53170	491 aa		3.79	□□□□□ -1.8
YEA4	YEL004W	YNR061C	P53747	219 aa		3.79	□□□□□ -1.8
YEA4	YEL004W	TFC6	Q06339	672 aa		3.79	□□□□□ -1.8
YEA4	YEL004W	YOL159C	Q08300	171 aa		3.79	□□□□□ -1.8
YEA4	YEL004W	APL4	Q12028	832 aa		3.79	□□□□□ -1.8
YEA4	YEL004W	PPT2	Q12036	173 aa		3.79	□□□□□ -1.8
YEA4	YEL004W	NUS1	Q12063	375 aa		3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms