RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	RSC6	P25632	483 aa		4.65	□□□□□ -1.67
PDR15	YDR406W	CTF13	P35203	478 aa		4.65	□□□□□ -1.67
PDR15	YDR406W	DHR2	P36009	735 aa	Predicted RBP	4.65	□□□□□ -1.67
PDR15	YDR406W	AGP2	P38090	596 aa		4.65	□□□□□ -1.67
PDR15	YDR406W	STL1	P39932	569 aa		4.65	□□□□□ -1.67
PDR15	YDR406W	NTA1	P40354	457 aa		4.65	□□□□□ -1.67
PDR15	YDR406W	INP51	P40559	946 aa	Known RBP	4.65	□□□□□ -1.67
PDR15	YDR406W	SAE2	P46946	345 aa		4.65	□□□□□ -1.67
PDR15	YDR406W	ADE13	Q05911	482 aa	Known RBP	4.65	□□□□□ -1.67
PDR15	YDR406W	ERR1	P0CX10	437 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	ERR2	P0CX11	437 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	YBR259W	P38338	688 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	XDJ1	P39102	459 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	FIR1	P40020	876 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	SNU56	Q03782	492 aa	Known RBP	4.64	□□□□□ -1.67
PDR15	YDR406W	YDL129W	Q07555	291 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	GAL80	P04387	435 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	TFB1	P32776	642 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	MET18	P40469	1032 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	MND2	P40577	368 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	MUK1	Q02866	612 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	YPR109W	Q06104	294 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	SRN2	Q99176	213 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	IZH4	Q99393	312 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	HEM15	P16622	393 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	TEC1	P18412	486 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	ETR1	P38071	380 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	THO1	P40040	218 aa	Known RBP	4.64	□□□□□ -1.67
PDR15	YDR406W	SAD1	P43589	448 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	UBP6	P43593	499 aa	Known RBP	4.64	□□□□□ -1.67
PDR15	YDR406W	PRP24	P49960	444 aa	Known RBP	4.64	□□□□□ -1.67
PDR15	YDR406W	SCS3	P53012	380 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	YAP1802	P53309	568 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	BIO4	P53630	237 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	PET117	Q02771	107 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	YDR286C	Q05530	114 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	YLR177W	Q06251	628 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	VPS54	Q12071	889 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	GET4	Q12125	312 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	AI5_ALPHA	Q9ZZX1	630 aa		4.64	□□□□□ -1.67
PDR15	YDR406W	OLE1	P21147	510 aa	Known RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	YHR045W	P38775	560 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	DSE1	P40077	573 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	GUF1	P46943	645 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	HXT15	P54854	567 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	SSQ1	Q05931	657 aa	Predicted RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	GRS2	Q06817	618 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	YET3	Q07451	203 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	NBP2	Q12163	236 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	SPE4	Q12455	300 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	IMA3	P0CW40	589 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	IMA4	P0CW41	589 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	YCL068C	P25593	260 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	SYN8	P31377	255 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	ACP1	P32463	125 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	MRP4	P32902	394 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	TSA1	P34760	196 aa	Known RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	HMT1	P38074	348 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	ATG12	P38316	186 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	MEF2	P39677	819 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	SEC26	P41810	973 aa	Known RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	SIP4	P46954	829 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	STP1	Q00947	519 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	SEC10	Q06245	871 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	IMA2	Q08295	589 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
PDR15	YDR406W	SMF3	Q12078	473 aa	Predicted RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	PKH2	Q12236	1081 aa	Known RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	YPT6	Q99260	215 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	FLP1	P03870	423 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	CBP2	P03874	630 aa	Predicted RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	ERG3	P32353	365 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	ZUO1	P32527	433 aa	Known RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	PEX2	P32800	271 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	YBR184W	P38299	523 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	TPA1	P40032	644 aa	Known RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	BTT1	P40314	149 aa	Predicted RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	CAF16	P43569	289 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	GYP8	P43570	497 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	TMA22	P47089	198 aa	Predicted RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	YJR120W	P47157	116 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	ASI1	P54074	624 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	GAD1	Q04792	585 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	GGA1	Q06336	557 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	NRT1	Q08485	598 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	GPM2	Q12008	311 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	RAD10	P06838	210 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	RAD3	P06839	778 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	TRM1	P15565	570 aa	Known RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	LYP1	P32487	611 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	TKL2	P33315	681 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	ARB1	P40024	610 aa	Known RBP	4.63	□□□□□ -1.67
PDR15	YDR406W	SPC98	P53540	846 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	RCF2	P53721	224 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	RRN5	Q02983	363 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	PPN1	Q04119	674 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	HDA3	Q06623	655 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	PMT7	Q06644	662 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	YOR022C	Q12204	715 aa		4.63	□□□□□ -1.67
PDR15	YDR406W	COX4	P04037	155 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms