RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	YPT53	P36019	220 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	NOP4	P37838	685 aa	Known RBP	4.82	□□□□□ -1.64
RPB7	YDR404C	MIT1	P40002	666 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	MAM1	P40065	302 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	UBP7	P40453	1071 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	CCT7	P42943	550 aa	Known RBP	4.82	□□□□□ -1.64
RPB7	YDR404C	IRC6	P43615	237 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	ARE2	P53629	642 aa	Known RBP	4.82	□□□□□ -1.64
RPB7	YDR404C	MRPL19	P53875	158 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	INN1	P53901	409 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	SPC19	Q03954	165 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	RAD30	Q04049	632 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	MFB1	Q04922	465 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	MRI1	Q06489	411 aa	Known RBP	4.82	□□□□□ -1.64
RPB7	YDR404C	YDL242W	Q07746	117 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	HUA2	Q12134	243 aa		4.82	□□□□□ -1.64
RPB7	YDR404C	SEC3	P33332	1336 aa	Known RBP	4.81	□□□□□ -1.64
RPB7	YDR404C	YCK1	P23291	538 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	KTR3	P38130	404 aa	Predicted RBP	4.81	□□□□□ -1.64
RPB7	YDR404C	MTG2	P38860	518 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	BDH2	P39713	417 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	SGM1	P47166	707 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	AAD10	P47182	288 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	YRB30	P53107	440 aa	Predicted RBP	4.81	□□□□□ -1.64
RPB7	YDR404C	PIL1	P53252	339 aa	Known RBP	4.81	□□□□□ -1.64
RPB7	YDR404C	COQ6	P53318	479 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	MUB1	Q03162	620 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	YML122C	Q03207	126 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	RMT2	Q03305	412 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	CRT10	Q08226	957 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	ZPS1	Q12512	249 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	YOR019W	Q99248	730 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	Q0010	Q9ZZX9	128 aa		4.81	□□□□□ -1.64
RPB7	YDR404C	MLP1	Q02455	1875 aa	Known RBP	4.81	□□□□□ -1.64
RPB7	YDR404C	CPA2	P03965	1118 aa	Known RBP	4.8	□□□□□ -1.64
RPB7	YDR404C	CHO2	P05374	869 aa	Known RBP	4.8	□□□□□ -1.64
RPB7	YDR404C	SEC53	P07283	254 aa	Known RBP	4.8	□□□□□ -1.64
RPB7	YDR404C	WHI2	P12611	486 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	RNR3	P21672	869 aa	Known RBP	4.8	□□□□□ -1.64
RPB7	YDR404C	PRE8	P23639	250 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	DMC1	P25453	334 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	SIP1	P32578	815 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	SRB5	P32585	307 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	GDA1	P32621	518 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	TFC3	P34111	1160 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	YMC2	P38087	329 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	ERC1	P38767	581 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	SLZ1	P40167	298 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	ATF1	P40353	525 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	VTC2	P43585	828 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	YFR016C	P43597	1233 aa	Known RBP	4.8	□□□□□ -1.64
RPB7	YDR404C	RMD8	P43620	662 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	NPA3	P47122	385 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	TAF11	Q04226	346 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	YML053C	Q04978	212 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	TAF3	Q12297	353 aa		4.8	□□□□□ -1.64
RPB7	YDR404C	MDM20	Q12387	796 aa	Known RBP	4.8	□□□□□ -1.64
RPB7	YDR404C	HSH49	Q99181	213 aa	Predicted RBP	4.8	□□□□□ -1.64
RPB7	YDR404C	LYS2	P07702	1392 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	CET1	O13297	549 aa	Predicted RBP	4.79	□□□□□ -1.64
RPB7	YDR404C	COX1	P00401	534 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	PGS1	P25578	521 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	CUE2	P36075	443 aa	Known RBP	4.79	□□□□□ -1.64
RPB7	YDR404C	RPF2	P36160	344 aa	Known RBP	4.79	□□□□□ -1.64
RPB7	YDR404C	YBL029W	P38201	376 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	FUN12	P39730	1002 aa	Known RBP	4.79	□□□□□ -1.64
RPB7	YDR404C	LAS21	P40367	830 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	DJP1	P40564	432 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	IME4	P41833	600 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	NGL3	Q03210	505 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	RBA50	Q04418	439 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	YLR287C	Q05881	355 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	ALE1	Q08548	619 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	CIR2	Q08822	631 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	LCB4	Q12246	624 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	YDR034W-B	Q6Q5X2	51 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	AI5_ALPHA	Q9ZZX1	630 aa		4.79	□□□□□ -1.64
RPB7	YDR404C	FLO11	P08640	1367 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	TOR2	P32600	2474 aa	Known RBP	4.78	□□□□□ -1.64
RPB7	YDR404C	GCN4	P03069	281 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	CBP1	P07252	654 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	YSP3	P25036	478 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	HES1	P35843	434 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	RTS1	P38903	757 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	TPA1	P40032	644 aa	Known RBP	4.78	□□□□□ -1.64
RPB7	YDR404C	JHD1	P40034	492 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	MSY1	P48527	492 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	MRX6	P48564	524 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	DSD1	P53095	428 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	YGL117W	P53133	265 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	CPR8	P53728	308 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	VPS75	P53853	264 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	PCL8	Q08966	492 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	NMD4	Q12129	218 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	SCM3	Q12334	223 aa		4.78	□□□□□ -1.64
RPB7	YDR404C	NOP58	Q12499	511 aa	Known RBP	4.78	□□□□□ -1.64
RPB7	YDR404C	ARG3	P05150	338 aa		4.77	□□□□□ -1.65
RPB7	YDR404C	TPK2	P06245	380 aa		4.77	□□□□□ -1.65
RPB7	YDR404C	KAR3	P17119	729 aa		4.77	□□□□□ -1.65
RPB7	YDR404C	RRP43	P25359	394 aa	Predicted RBP	4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms