RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP42	YDR192C	RPA135	P22138	1203 aa	Known RBP	4.9	□□□□□ -1.63
NUP42	YDR192C	ILV6	P25605	309 aa	Known RBP	4.9	□□□□□ -1.63
NUP42	YDR192C	RPN12	P32496	274 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	ANP1	P32629	500 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	YKT6	P36015	200 aa	Known RBP	4.9	□□□□□ -1.63
NUP42	YDR192C	MIC60	P36112	540 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	IFA38	P38286	347 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	MTG2	P38860	518 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	RIC1	P40395	1056 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	ASE1	P50275	885 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	LSB1	P53281	241 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	CSL4	P53859	292 aa	Predicted RBP	4.9	□□□□□ -1.63
NUP42	YDR192C	WAR1	Q03631	944 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	YPL191C	Q08930	360 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	KEL3	Q08979	651 aa	Predicted RBP	4.9	□□□□□ -1.63
NUP42	YDR192C	RPL7B	Q12213	244 aa	Known RBP	4.9	□□□□□ -1.63
NUP42	YDR192C	COX17	Q12287	69 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	DDP1	Q99321	188 aa	Known RBP	4.9	□□□□□ -1.63
NUP42	YDR192C	ATP2	P00830	511 aa	Known RBP	4.89	□□□□□ -1.63
NUP42	YDR192C	SNF1	P06782	633 aa	Known RBP	4.89	□□□□□ -1.63
NUP42	YDR192C	PMA2	P19657	947 aa		4.89	□□□□□ -1.63
NUP42	YDR192C	MAK31	P23059	88 aa		4.89	□□□□□ -1.63
NUP42	YDR192C	ICL1	P28240	557 aa	Predicted RBP	4.89	□□□□□ -1.63
NUP42	YDR192C	MAL33	P38157	468 aa		4.89	□□□□□ -1.63
NUP42	YDR192C	RFT1	P38206	574 aa	Predicted RBP	4.89	□□□□□ -1.63
NUP42	YDR192C	ARO9	P38840	513 aa	Predicted RBP	4.89	□□□□□ -1.63
NUP42	YDR192C	PAC2	P39937	518 aa		4.89	□□□□□ -1.63
NUP42	YDR192C	YER010C	P40011	234 aa		4.89	□□□□□ -1.63
NUP42	YDR192C	NPA3	P47122	385 aa		4.89	□□□□□ -1.63
NUP42	YDR192C	PSP1	P50896	841 aa	Known RBP	4.89	□□□□□ -1.63
NUP42	YDR192C	RPT6	Q01939	405 aa	Known RBP	4.89	□□□□□ -1.63
NUP42	YDR192C	SVL3	Q03088	825 aa	Known RBP	4.89	□□□□□ -1.63
NUP42	YDR192C	CSM3	Q04659	317 aa		4.89	□□□□□ -1.63
NUP42	YDR192C	ULA1	Q12059	462 aa		4.89	□□□□□ -1.63
NUP42	YDR192C	TIP41	Q12199	356 aa		4.89	□□□□□ -1.63
NUP42	YDR192C	ERG27	Q12452	347 aa	Known RBP	4.89	□□□□□ -1.63
NUP42	YDR192C	PNO1	Q99216	274 aa	Known RBP	4.89	□□□□□ -1.63
NUP42	YDR192C	LRE1	P25579	583 aa	Known RBP	4.88	□□□□□ -1.63
NUP42	YDR192C	URK1	P27515	501 aa		4.88	□□□□□ -1.63
NUP42	YDR192C	CHS3	P29465	1165 aa		4.88	□□□□□ -1.63
NUP42	YDR192C	SPC110	P32380	944 aa		4.88	□□□□□ -1.63
NUP42	YDR192C	CIR1	P42940	261 aa		4.88	□□□□□ -1.63
NUP42	YDR192C	BNA1	P47096	177 aa		4.88	□□□□□ -1.63
NUP42	YDR192C	COG1	P53079	417 aa		4.88	□□□□□ -1.63
NUP42	YDR192C	GIS1	Q03833	894 aa		4.88	□□□□□ -1.63
NUP42	YDR192C	YDL242W	Q07746	117 aa		4.88	□□□□□ -1.63
NUP42	YDR192C	SLK19	Q08581	821 aa	Known RBP	4.88	□□□□□ -1.63
NUP42	YDR192C	SWT1	Q12104	458 aa		4.88	□□□□□ -1.63
NUP42	YDR192C	LCB4	Q12246	624 aa		4.88	□□□□□ -1.63
NUP42	YDR192C	AHA1	Q12449	350 aa	Known RBP	4.88	□□□□□ -1.63
NUP42	YDR192C	ADE5,7	P07244	802 aa	Known RBP	4.87	□□□□□ -1.63
NUP42	YDR192C	HEM1	P09950	548 aa	Predicted RBP	4.87	□□□□□ -1.63
NUP42	YDR192C	TY2A-LR1	P0C2J4	438 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	TY2A-F	P0CX61	438 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	TY2A-GR2	P0CX62	438 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	SNF3	P10870	884 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	PRE8	P23639	250 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	GFD2	P25370	566 aa	Known RBP	4.87	□□□□□ -1.63
NUP42	YDR192C	TY2A-C	P25383	438 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	RDS1	P25611	832 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	MCM10	P32354	571 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	CBF2	P32504	956 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	EMP70	P32802	667 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	SAS3	P34218	831 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	MYO3	P36006	1272 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	VPS45	P38932	577 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	YIL089W	P40500	205 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	UBX6	P47049	396 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	TAM41	P53230	385 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	YNL092W	P53934	400 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	TY2A-DR2	Q03483	438 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	ARG7	Q04728	441 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	YDR341C	Q05506	607 aa	Known RBP	4.87	□□□□□ -1.63
NUP42	YDR192C	MRI1	Q06489	411 aa	Known RBP	4.87	□□□□□ -1.63
NUP42	YDR192C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
NUP42	YDR192C	BAG7	Q12128	409 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	TY2A-B	Q12260	438 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	TY2A-OR2	Q12293	438 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	TY2A-DR1	Q12392	438 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	TY2A-OR1	Q12439	438 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	PGA3	Q12746	312 aa	Known RBP	4.87	□□□□□ -1.63
NUP42	YDR192C	TY2A-DR3	Q99303	438 aa		4.87	□□□□□ -1.63
NUP42	YDR192C	PMD1	P32634	1753 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	YLR302C	O13544	120 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	AMD2	P22580	549 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	GDA1	P32621	518 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	RPC34	P32910	317 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	TFC3	P34111	1160 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	CST26	P38226	397 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	RXT2	P38255	430 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	BUD16	P39988	312 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	TMA108	P40462	946 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	TDA10	P42938	290 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	YFL015C	P43578	164 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	RSC1	P53236	928 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	YGR079W	P53249	370 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	SOL4	P53315	255 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	CBK1	P53894	756 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	PLM2	Q04383	521 aa		4.86	□□□□□ -1.63
NUP42	YDR192C	HCR1	Q05775	265 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 30 ms