RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	SWH1	P35845	1188 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	YNK1	P36010	153 aa	Known RBP	2.02	□□□□□ -2.09
CSN9	YDR179C	MIA40	P36046	403 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	YKL133C	P36066	463 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	PHO90	P39535	881 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	YTA12	P40341	825 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	HXT9	P40885	567 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	YPI1	P43587	155 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	SMC3	P47037	1230 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	YGL082W	P53155	381 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	BOR1	P53838	576 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	IST1	P53843	298 aa	Predicted RBP	2.02	□□□□□ -2.09
CSN9	YDR179C	CRN1	Q06440	651 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	VAM6	Q07468	1049 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	YDL218W	Q07629	317 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	YOL159C	Q08300	171 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	ARP6	Q12509	438 aa		2.02	□□□□□ -2.09
CSN9	YDR179C	NCP1	P16603	691 aa	Known RBP	2.01	□□□□□ -2.09
CSN9	YDR179C	CDC15	P27636	974 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	TFC3	P34111	1160 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	NTR2	P36118	322 aa	Predicted RBP	2.01	□□□□□ -2.09
CSN9	YDR179C	MRPL4	P36517	319 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	MRPL36	P36531	177 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	ECM10	P39987	644 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	VPS27	P40343	622 aa	Known RBP	2.01	□□□□□ -2.09
CSN9	YDR179C	GUF1	P46943	645 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	YDL186W	P48568	277 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	ASE1	P50275	885 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	YTP1	P53584	459 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	ADD37	Q03233	198 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	RSM28	Q03430	361 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	TRS130	Q03660	1102 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	TMA64	Q04600	565 aa	Known RBP	2.01	□□□□□ -2.09
CSN9	YDR179C	HCR1	Q05775	265 aa	Known RBP	2.01	□□□□□ -2.09
CSN9	YDR179C	RRP6	Q12149	733 aa	Known RBP	2.01	□□□□□ -2.09
CSN9	YDR179C	YLL056C	Q12177	298 aa		2.01	□□□□□ -2.09
CSN9	YDR179C	LDB16	P25587	256 aa		2	□□□□□ -2.09
CSN9	YDR179C	SPC34	P36131	295 aa		2	□□□□□ -2.09
CSN9	YDR179C	ERR3	P42222	437 aa		2	□□□□□ -2.09
CSN9	YDR179C	FOL1	P53848	824 aa		2	□□□□□ -2.09
CSN9	YDR179C	ATP2	P00830	511 aa	Known RBP	1.99	□□□□□ -2.09
CSN9	YDR179C	SWI4	P25302	1093 aa	Known RBP	1.99	□□□□□ -2.09
CSN9	YDR179C	GEX2	P36173	615 aa		1.99	□□□□□ -2.09
CSN9	YDR179C	RRT2	P38332	387 aa		1.99	□□□□□ -2.09
CSN9	YDR179C	NPR3	P38742	1146 aa		1.99	□□□□□ -2.09
CSN9	YDR179C	PKP1	P40530	394 aa		1.99	□□□□□ -2.09
CSN9	YDR179C	YJL213W	P40896	331 aa		1.99	□□□□□ -2.09
CSN9	YDR179C	SPG5	P42933	373 aa		1.99	□□□□□ -2.09
CSN9	YDR179C	IKS1	P47042	667 aa		1.99	□□□□□ -2.09
CSN9	YDR179C	NUP100	Q02629	959 aa		1.99	□□□□□ -2.09
CSN9	YDR179C	RPM2	Q02773	1202 aa		1.99	□□□□□ -2.09
CSN9	YDR179C	ERP1	Q05359	219 aa	Known RBP	1.99	□□□□□ -2.09
CSN9	YDR179C	BRE1	Q07457	700 aa	Known RBP	1.99	□□□□□ -2.09
CSN9	YDR179C	HXK2	P04807	486 aa	Known RBP	1.98	□□□□□ -2.09
CSN9	YDR179C	GDH1	P07262	454 aa	Known RBP	1.98	□□□□□ -2.09
CSN9	YDR179C	MRS3	P10566	314 aa		1.98	□□□□□ -2.09
CSN9	YDR179C	RPS2	P25443	254 aa	Known RBP	1.98	□□□□□ -2.09
CSN9	YDR179C	CMK1	P27466	446 aa	Known RBP	1.98	□□□□□ -2.09
CSN9	YDR179C	SRB5	P32585	307 aa		1.98	□□□□□ -2.09
CSN9	YDR179C	LOS1	P33418	1100 aa	Predicted RBP	1.98	□□□□□ -2.09
CSN9	YDR179C	PHD1	P36093	366 aa		1.98	□□□□□ -2.09
CSN9	YDR179C	ESL2	P36168	1195 aa		1.98	□□□□□ -2.09
CSN9	YDR179C	YEL068C	P39977	110 aa		1.98	□□□□□ -2.09
CSN9	YDR179C	NNF2	P53253	936 aa		1.98	□□□□□ -2.09
CSN9	YDR179C	CSL4	P53859	292 aa	Predicted RBP	1.98	□□□□□ -2.09
CSN9	YDR179C	TDA7	P53882	636 aa	Predicted RBP	1.98	□□□□□ -2.09
CSN9	YDR179C	MSS11	Q03825	758 aa		1.98	□□□□□ -2.09
CSN9	YDR179C	HEL2	Q05580	639 aa	Known RBP	1.98	□□□□□ -2.09
CSN9	YDR179C	STP3	Q05937	343 aa		1.98	□□□□□ -2.09
CSN9	YDR179C	MLC2	Q06580	163 aa		1.98	□□□□□ -2.09
CSN9	YDR179C	BSC6	Q08280	497 aa		1.98	□□□□□ -2.09
CSN9	YDR179C	APL4	Q12028	832 aa		1.98	□□□□□ -2.09
CSN9	YDR179C	SSB1	P11484	613 aa	Known RBP	1.97	□□□□□ -2.09
CSN9	YDR179C	MTF1	P14908	341 aa	Known RBP	1.97	□□□□□ -2.09
CSN9	YDR179C	TYR1	P20049	452 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	SPE2	P21182	396 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	CLB4	P24871	460 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	MCM4	P30665	933 aa	Known RBP	1.97	□□□□□ -2.09
CSN9	YDR179C	YKL050C	P35736	922 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	PCA1	P38360	1216 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	RPH1	P39956	796 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	SSB2	P40150	613 aa	Known RBP	1.97	□□□□□ -2.09
CSN9	YDR179C	SWP82	P43554	623 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	RTT101	P47050	842 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	SOL4	P53315	255 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	ATG26	Q06321	1198 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	CDC45	Q08032	650 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	RDR1	Q08904	546 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	ERG27	Q12452	347 aa	Known RBP	1.97	□□□□□ -2.09
CSN9	YDR179C	SET6	Q12529	373 aa		1.97	□□□□□ -2.09
CSN9	YDR179C	TMA7	Q3E764	64 aa	Known RBP	1.97	□□□□□ -2.09
CSN9	YDR179C	RPL15A	P05748	204 aa	Known RBP	1.96	□□□□□ -2.1
CSN9	YDR179C	SNC1	P31109	117 aa		1.96	□□□□□ -2.1
CSN9	YDR179C	ACH1	P32316	526 aa		1.96	□□□□□ -2.1
CSN9	YDR179C	VPS17	P32913	551 aa		1.96	□□□□□ -2.1
CSN9	YDR179C	YIL060W	P40519	144 aa		1.96	□□□□□ -2.1
CSN9	YDR179C	AXL1	P40851	1208 aa		1.96	□□□□□ -2.1
CSN9	YDR179C	YFR020W	P43600	232 aa		1.96	□□□□□ -2.1
CSN9	YDR179C	COS10	P52924	374 aa		1.96	□□□□□ -2.1
CSN9	YDR179C	PAP2	P53632	584 aa	Known RBP	1.96	□□□□□ -2.1

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms