RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W VAS1P07806 1104 aaKnown RBP1.57□□□□□ -2.16
CDC36YDL165W YSP3P25036 478 aa1.57□□□□□ -2.16
CDC36YDL165W TOA1P32773 286 aa1.57□□□□□ -2.16
CDC36YDL165W TGL1P34163 548 aa1.57□□□□□ -2.16
CDC36YDL165W SPC34P36131 295 aa1.57□□□□□ -2.16
CDC36YDL165W BUD16P39988 312 aa1.57□□□□□ -2.16
CDC36YDL165W IDP2P41939 412 aa1.57□□□□□ -2.16
CDC36YDL165W TDA7P53882 636 aaPredicted RBP1.57□□□□□ -2.16
CDC36YDL165W TGL2P54857 326 aa1.57□□□□□ -2.16
CDC36YDL165W HEL2Q05580 639 aaKnown RBP1.57□□□□□ -2.16
CDC36YDL165W TRE2Q08693 809 aa1.57□□□□□ -2.16
CDC36YDL165W HSC82P15108 705 aaKnown RBP1.56□□□□□ -2.16
CDC36YDL165W CLB2P24869 491 aa1.56□□□□□ -2.16
CDC36YDL165W RFA2P26754 273 aaKnown RBP1.56□□□□□ -2.16
CDC36YDL165W HEM12P32347 362 aaPredicted RBP1.56□□□□□ -2.16
CDC36YDL165W SAC1P32368 623 aaKnown RBP1.56□□□□□ -2.16
CDC36YDL165W SPR1P32603 445 aa1.56□□□□□ -2.16
CDC36YDL165W DJP1P40564 432 aa1.56□□□□□ -2.16
CDC36YDL165W IMA5P40884 581 aa1.56□□□□□ -2.16
CDC36YDL165W MDG1P53885 366 aa1.56□□□□□ -2.16
CDC36YDL165W SUB1P54000 292 aaKnown RBP1.56□□□□□ -2.16
CDC36YDL165W VPS72Q03388 795 aa1.56□□□□□ -2.16
CDC36YDL165W PHM6Q05637 104 aa1.56□□□□□ -2.16
CDC36YDL165W PEX15Q08215 383 aa1.56□□□□□ -2.16
CDC36YDL165W NUR1Q12066 484 aa1.56□□□□□ -2.16
CDC36YDL165W HIF1Q12373 385 aa1.56□□□□□ -2.16
CDC36YDL165W PET111P08468 800 aa1.55□□□□□ -2.16
CDC36YDL165W KAR1P11927 433 aa1.55□□□□□ -2.16
CDC36YDL165W POL3P15436 1097 aa1.55□□□□□ -2.16
CDC36YDL165W CLC1P17891 233 aa1.55□□□□□ -2.16
CDC36YDL165W CBF5P33322 483 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
CDC36YDL165W TAF5P38129 798 aa1.55□□□□□ -2.16
CDC36YDL165W RRP3P38712 501 aaKnown RBP1.55□□□□□ -2.16
CDC36YDL165W NAB3P38996 802 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
CDC36YDL165W YJR008WP47085 338 aa1.55□□□□□ -2.16
CDC36YDL165W PUS4P48567 403 aaKnown RBP1.55□□□□□ -2.16
CDC36YDL165W PIL1P53252 339 aaKnown RBP1.55□□□□□ -2.16
CDC36YDL165W YTP1P53584 459 aa1.55□□□□□ -2.16
CDC36YDL165W YLR152CP54072 576 aa1.55□□□□□ -2.16
CDC36YDL165W MOT3P54785 490 aaKnown RBP1.55□□□□□ -2.16
CDC36YDL165W YPL108WQ02872 168 aaPredicted RBP1.55□□□□□ -2.16
CDC36YDL165W RBA50Q04418 439 aa1.55□□□□□ -2.16
CDC36YDL165W YEH2Q07950 538 aa1.55□□□□□ -2.16
CDC36YDL165W ADH4P10127 382 aa1.54□□□□□ -2.16
CDC36YDL165W RAP1P11938 827 aa1.54□□□□□ -2.16
CDC36YDL165W PHO3P24031 467 aa1.54□□□□□ -2.16
CDC36YDL165W SPC110P32380 944 aa1.54□□□□□ -2.16
CDC36YDL165W NDC1P32500 655 aa1.54□□□□□ -2.16
CDC36YDL165W PHO90P39535 881 aa1.54□□□□□ -2.16
CDC36YDL165W TAM41P53230 385 aa1.54□□□□□ -2.16
CDC36YDL165W PEX8P53248 589 aa1.54□□□□□ -2.16
CDC36YDL165W NNF2P53253 936 aa1.54□□□□□ -2.16
CDC36YDL165W CEG1Q01159 459 aaPredicted RBP1.54□□□□□ -2.16
CDC36YDL165W RNY1Q02933 434 aaKnown RBP1.54□□□□□ -2.16
CDC36YDL165W TLG1Q03322 224 aa1.54□□□□□ -2.16
CDC36YDL165W FMP45Q07651 309 aa1.54□□□□□ -2.16
CDC36YDL165W YOL057WQ08225 711 aa1.54□□□□□ -2.16
CDC36YDL165W YCL021W-AQ96VH3 125 aa1.54□□□□□ -2.16
CDC36YDL165W MTF1P14908 341 aaKnown RBP1.53□□□□□ -2.16
CDC36YDL165W KRS1P15180 591 aaKnown RBP1.53□□□□□ -2.16
CDC36YDL165W APA1P16550 321 aaKnown RBP1.53□□□□□ -2.16
CDC36YDL165W ACH1P32316 526 aa1.53□□□□□ -2.16
CDC36YDL165W SPT7P35177 1332 aa1.53□□□□□ -2.16
CDC36YDL165W TOM20P35180 183 aa1.53□□□□□ -2.16
CDC36YDL165W GRX7P38068 203 aa1.53□□□□□ -2.16
CDC36YDL165W YIL060WP40519 144 aa1.53□□□□□ -2.16
CDC36YDL165W MPP10P47083 593 aaKnown RBP1.53□□□□□ -2.16
CDC36YDL165W HIM1Q06674 414 aa1.53□□□□□ -2.16
CDC36YDL165W GRC3Q07845 632 aa1.53□□□□□ -2.16
CDC36YDL165W YML003WP0CF16 290 aa1.52□□□□□ -2.17
CDC36YDL165W PMR1P13586 950 aa1.52□□□□□ -2.17
CDC36YDL165W YEF3P16521 1044 aaKnown RBP1.52□□□□□ -2.17
CDC36YDL165W SRP54P20424 541 aaKnown RBP1.52□□□□□ -2.17
CDC36YDL165W SWI4P25302 1093 aaKnown RBP1.52□□□□□ -2.17
CDC36YDL165W LTV1P34078 463 aa1.52□□□□□ -2.17
CDC36YDL165W PHD1P36093 366 aa1.52□□□□□ -2.17
CDC36YDL165W MAD3P47074 515 aa1.52□□□□□ -2.17
CDC36YDL165W TAN1P53072 289 aaPredicted RBP1.52□□□□□ -2.17
CDC36YDL165W PKP2P53170 491 aa1.52□□□□□ -2.17
CDC36YDL165W BTN2P53286 410 aa1.52□□□□□ -2.17
CDC36YDL165W DCP2P53550 970 aaKnown RBP1.52□□□□□ -2.17
CDC36YDL165W MSS11Q03825 758 aa1.52□□□□□ -2.17
CDC36YDL165W GRX3Q03835 250 aa1.52□□□□□ -2.17
CDC36YDL165W STP3Q05937 343 aa1.52□□□□□ -2.17
CDC36YDL165W SWA2Q06677 668 aa1.52□□□□□ -2.17
CDC36YDL165W AYT1Q12226 474 aa1.52□□□□□ -2.17
CDC36YDL165W HEM2P05373 342 aa1.51□□□□□ -2.17
CDC36YDL165W FRD1P32614 470 aaKnown RBP1.51□□□□□ -2.17
CDC36YDL165W SWE1P32944 819 aa1.51□□□□□ -2.17
CDC36YDL165W RFS1P38234 210 aaKnown RBP1.51□□□□□ -2.17
CDC36YDL165W MTC4P38335 694 aaKnown RBP1.51□□□□□ -2.17
CDC36YDL165W PAF1P38351 445 aa1.51□□□□□ -2.17
CDC36YDL165W SWD1P39706 426 aa1.51□□□□□ -2.17
CDC36YDL165W CTK2P46962 323 aa1.51□□□□□ -2.17
CDC36YDL165W VPS4P52917 437 aa1.51□□□□□ -2.17
CDC36YDL165W IGO1P53897 168 aa1.51□□□□□ -2.17
CDC36YDL165W MTG1Q03151 367 aaPredicted RBP1.51□□□□□ -2.17
CDC36YDL165W ATG23Q06671 453 aa1.51□□□□□ -2.17
CDC36YDL165W ETT1Q08421 412 aaKnown RBP1.51□□□□□ -2.17
CDC36YDL165W SLX4Q12098 748 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 104 ms