RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	IRC8	P47046	822 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	DIA3	P52290	468 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	VID30	P53076	958 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	APM1	Q00776	475 aa	Predicted RBP	5.74	□□□□□ -1.49
RPN5	YDL147W	CYK3	Q07533	885 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	RIM20	Q12033	661 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	YPT6	Q99260	215 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	SEC3	P33332	1336 aa	Known RBP	5.73	□□□□□ -1.49
RPN5	YDL147W	ARD1	P07347	238 aa	Predicted RBP	5.73	□□□□□ -1.49
RPN5	YDL147W	MRP2	P10663	115 aa	Predicted RBP	5.73	□□□□□ -1.49
RPN5	YDL147W	YMC1	P32331	307 aa		5.73	□□□□□ -1.49
RPN5	YDL147W	VMA8	P32610	256 aa	Known RBP	5.73	□□□□□ -1.49
RPN5	YDL147W	EMP70	P32802	667 aa		5.73	□□□□□ -1.49
RPN5	YDL147W	BLI1	P35727	113 aa		5.73	□□□□□ -1.49
RPN5	YDL147W	UBP11	P36026	717 aa		5.73	□□□□□ -1.49
RPN5	YDL147W	ADE17	P38009	592 aa	Known RBP	5.73	□□□□□ -1.49
RPN5	YDL147W	YIL166C	P40445	542 aa		5.73	□□□□□ -1.49
RPN5	YDL147W	DOT5	P40553	215 aa		5.73	□□□□□ -1.49
RPN5	YDL147W	ROK1	P45818	564 aa	Predicted RBP	5.73	□□□□□ -1.49
RPN5	YDL147W	RPS7B	P48164	190 aa	Known RBP	5.73	□□□□□ -1.49
RPN5	YDL147W	VPS38	Q05919	439 aa		5.73	□□□□□ -1.49
RPN5	YDL147W	ARO10	Q06408	635 aa		5.73	□□□□□ -1.49
RPN5	YDL147W	IRC10	Q08118	586 aa		5.73	□□□□□ -1.49
RPN5	YDL147W	SLK19	Q08581	821 aa	Known RBP	5.73	□□□□□ -1.49
RPN5	YDL147W	GET3	Q12154	354 aa	Known RBP	5.73	□□□□□ -1.49
RPN5	YDL147W	PDX1	P16451	410 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	UIP3	P39547	235 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	PKP1	P40530	394 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	MET28	P40573	187 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	AXL1	P40851	1208 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	STU2	P46675	888 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	CTK2	P46962	323 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	SMC3	P47037	1230 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	MRK1	P50873	501 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	MDG1	P53885	366 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	ZDS2	P54786	942 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	LUC7	Q07508	261 aa	Predicted RBP	5.72	□□□□□ -1.49
RPN5	YDL147W	GRC3	Q07845	632 aa		5.72	□□□□□ -1.49
RPN5	YDL147W	FMP40	Q08968	688 aa	Predicted RBP	5.72	□□□□□ -1.49
RPN5	YDL147W	MF(ALPHA)1	P01149	165 aa		5.71	□□□□□ -1.5
RPN5	YDL147W	EST1	P17214	699 aa	Predicted RBP	5.71	□□□□□ -1.5
RPN5	YDL147W	MSS51	P32335	436 aa		5.71	□□□□□ -1.5
RPN5	YDL147W	VID24	P38263	362 aa		5.71	□□□□□ -1.5
RPN5	YDL147W	YEL057C	P39983	233 aa		5.71	□□□□□ -1.5
RPN5	YDL147W	YGR127W	P53275	312 aa		5.71	□□□□□ -1.5
RPN5	YDL147W	YDR239C	Q03780	787 aa		5.71	□□□□□ -1.5
RPN5	YDL147W	THI3	Q07471	609 aa		5.71	□□□□□ -1.5
RPN5	YDL147W	BUD7	Q08754	746 aa		5.71	□□□□□ -1.5
RPN5	YDL147W	INP53	Q12271	1107 aa		5.71	□□□□□ -1.5
RPN5	YDL147W	AVL9	Q12500	764 aa		5.71	□□□□□ -1.5
RPN5	YDL147W	SMC6	Q12749	1114 aa		5.71	□□□□□ -1.5
RPN5	YDL147W	HOM3	P10869	527 aa		5.7	□□□□□ -1.5
RPN5	YDL147W	GSH1	P32477	678 aa		5.7	□□□□□ -1.5
RPN5	YDL147W	RKM3	P38222	552 aa		5.7	□□□□□ -1.5
RPN5	YDL147W	FAR3	P46671	204 aa		5.7	□□□□□ -1.5
RPN5	YDL147W	RSC1	P53236	928 aa		5.7	□□□□□ -1.5
RPN5	YDL147W	SLI1	P53304	468 aa		5.7	□□□□□ -1.5
RPN5	YDL147W	YPL272C	Q08984	517 aa		5.7	□□□□□ -1.5
RPN5	YDL147W	YLR049C	Q12110	428 aa		5.7	□□□□□ -1.5
RPN5	YDL147W	PET111	P08468	800 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	AQY1	P0CD91	305 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	RPC53	P25441	422 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	CDC60	P26637	1090 aa	Known RBP	5.69	□□□□□ -1.5
RPN5	YDL147W	SEF1	P34228	1148 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	APD1	P38281	316 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	SRP72	P38688	640 aa	Known RBP	5.69	□□□□□ -1.5
RPN5	YDL147W	PAC2	P39937	518 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	LSM5	P40089	93 aa	Known RBP	5.69	□□□□□ -1.5
RPN5	YDL147W	MET18	P40469	1032 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	YFR020W	P43600	232 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	NNF2	P53253	936 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	MAK10	Q02197	733 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	FMP30	Q02883	468 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	YLR352W	Q06479	807 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	RAD34	Q06665	692 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	APL4	Q12028	832 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	LEU9	Q12166	604 aa	Known RBP	5.69	□□□□□ -1.5
RPN5	YDL147W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
RPN5	YDL147W	GRX6	Q12438	231 aa		5.69	□□□□□ -1.5
RPN5	YDL147W	PGA3	Q12746	312 aa	Known RBP	5.69	□□□□□ -1.5
RPN5	YDL147W	GAL80	P04387	435 aa		5.68	□□□□□ -1.5
RPN5	YDL147W	CLB3	P24870	427 aa		5.68	□□□□□ -1.5
RPN5	YDL147W	SSE2	P32590	693 aa	Known RBP	5.68	□□□□□ -1.5
RPN5	YDL147W	SNU114	P36048	1008 aa	Known RBP	5.68	□□□□□ -1.5
RPN5	YDL147W	MNN2	P38069	597 aa		5.68	□□□□□ -1.5
RPN5	YDL147W	SMF1	P38925	575 aa		5.68	□□□□□ -1.5
RPN5	YDL147W	ALG5	P40350	334 aa		5.68	□□□□□ -1.5
RPN5	YDL147W	MAF1	P41910	395 aa		5.68	□□□□□ -1.5
RPN5	YDL147W	PTR3	P43606	678 aa		5.68	□□□□□ -1.5
RPN5	YDL147W	SAE2	P46946	345 aa		5.68	□□□□□ -1.5
RPN5	YDL147W	YML6	P51998	286 aa		5.68	□□□□□ -1.5
RPN5	YDL147W	YPR003C	P53394	754 aa		5.68	□□□□□ -1.5
RPN5	YDL147W	ISA2	Q12425	185 aa		5.68	□□□□□ -1.5
RPN5	YDL147W	PDA1	P16387	420 aa	Known RBP	5.67	□□□□□ -1.5
RPN5	YDL147W	GPI10	P30777	616 aa		5.67	□□□□□ -1.5
RPN5	YDL147W	YBR144C	P34215	104 aa		5.67	□□□□□ -1.5
RPN5	YDL147W	CST26	P38226	397 aa		5.67	□□□□□ -1.5
RPN5	YDL147W	OTU2	P38747	307 aa	Known RBP	5.67	□□□□□ -1.5
RPN5	YDL147W	CCT6	P39079	546 aa		5.67	□□□□□ -1.5
RPN5	YDL147W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms