RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C FAA2P39518 744 aa1.09□□□□□ -2.24
VAM6YDL077C FHL1P39521 936 aa1.09□□□□□ -2.24
VAM6YDL077C ERV46P39727 415 aa1.09□□□□□ -2.24
VAM6YDL077C FRT2P39734 528 aa1.09□□□□□ -2.24
VAM6YDL077C PZF1P39933 429 aa1.09□□□□□ -2.24
VAM6YDL077C UBP5P39944 805 aa1.09□□□□□ -2.24
VAM6YDL077C YEN1P40028 759 aa1.09□□□□□ -2.24
VAM6YDL077C SLZ1P40167 298 aa1.09□□□□□ -2.24
VAM6YDL077C HPM1P40481 377 aa1.09□□□□□ -2.24
VAM6YDL077C RET2P43621 546 aa1.09□□□□□ -2.24
VAM6YDL077C SPO74P45819 413 aa1.09□□□□□ -2.24
VAM6YDL077C YJR030CP47101 745 aa1.09□□□□□ -2.24
VAM6YDL077C ADO1P47143 340 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C SKP1P52286 194 aa1.09□□□□□ -2.24
VAM6YDL077C MCM6P53091 1017 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C MRM2P53123 320 aa1.09□□□□□ -2.24
VAM6YDL077C SPO1P53541 631 aa1.09□□□□□ -2.24
VAM6YDL077C GOR1P53839 350 aa1.09□□□□□ -2.24
VAM6YDL077C TOF1P53840 1238 aa1.09□□□□□ -2.24
VAM6YDL077C NOP13P53883 403 aaKnown RBP RIP-Chip data1.09□□□□□ -2.24not detected
VAM6YDL077C REX2P54964 269 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C TIM11P81449 96 aaPredicted RBP1.09□□□□□ -2.24
VAM6YDL077C YDC1Q02896 317 aa1.09□□□□□ -2.24
VAM6YDL077C YPL113CQ02961 396 aa1.09□□□□□ -2.24
VAM6YDL077C PEX25Q02969 394 aa1.09□□□□□ -2.24
VAM6YDL077C RLI1Q03195 608 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C ENT5Q03769 411 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C TRM82Q03774 444 aa1.09□□□□□ -2.24
VAM6YDL077C TIF35Q04067 274 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C PEX10Q05568 337 aa1.09□□□□□ -2.24
VAM6YDL077C DBP9Q06218 594 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C GRC3Q07845 632 aa1.09□□□□□ -2.24
VAM6YDL077C THI73Q07904 523 aa1.09□□□□□ -2.24
VAM6YDL077C OSW1Q08692 278 aa1.09□□□□□ -2.24
VAM6YDL077C YPL191CQ08930 360 aa1.09□□□□□ -2.24
VAM6YDL077C YPL199CQ08954 240 aa1.09□□□□□ -2.24
VAM6YDL077C GPM3Q12326 303 aa1.09□□□□□ -2.24
VAM6YDL077C PGA3Q12746 312 aaKnown RBP1.09□□□□□ -2.24
VAM6YDL077C FKS3Q04952 1785 aa1.08□□□□□ -2.24
VAM6YDL077C ATP2P00830 511 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C RPP2AP05319 106 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C RPC40P07703 335 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C ZWF1P11412 505 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C YAK1P14680 807 aa1.08□□□□□ -2.24
VAM6YDL077C NSP1P14907 823 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C POL3P15436 1097 aa1.08□□□□□ -2.24
VAM6YDL077C FUS3P16892 353 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C AEP2P22136 580 aa1.08□□□□□ -2.24
VAM6YDL077C VMA16P23968 213 aa1.08□□□□□ -2.24
VAM6YDL077C SNT1P25357 1226 aa1.08□□□□□ -2.24
VAM6YDL077C CHA1P25379 360 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C PWP2P25635 923 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C GPI10P30777 616 aa1.08□□□□□ -2.24
VAM6YDL077C ATP7P30902 174 aa1.08□□□□□ -2.24
VAM6YDL077C LDS1P31379 325 aa1.08□□□□□ -2.24
VAM6YDL077C ANP1P32629 500 aa1.08□□□□□ -2.24
VAM6YDL077C SPT10P35208 640 aa1.08□□□□□ -2.24
VAM6YDL077C CUE2P36075 443 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C UGA2P38067 497 aa1.08□□□□□ -2.24
VAM6YDL077C ECM31P38122 312 aa1.08□□□□□ -2.24
VAM6YDL077C PPS1P38148 807 aa1.08□□□□□ -2.24
VAM6YDL077C YBR032WP38223 100 aa1.08□□□□□ -2.24
VAM6YDL077C MBA1P38300 278 aa1.08□□□□□ -2.24
VAM6YDL077C YBR287WP38355 427 aa1.08□□□□□ -2.24
VAM6YDL077C PCA1P38360 1216 aa1.08□□□□□ -2.24
VAM6YDL077C CRG1P38892 291 aaRIP-Chip data1.08□□□□□ -2.24 RIP-Chip
VAM6YDL077C HRB1P38922 454 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
VAM6YDL077C NPT1P39683 429 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C AIM2P39721 246 aa1.08□□□□□ -2.24
VAM6YDL077C RSP5P39940 809 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C AIM10P39965 576 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C PHM8P40025 321 aa1.08□□□□□ -2.24
VAM6YDL077C SCC4P40090 624 aa1.08□□□□□ -2.24
VAM6YDL077C RGI2P40188 164 aa1.08□□□□□ -2.24
VAM6YDL077C PSF2P40359 213 aa1.08□□□□□ -2.24
VAM6YDL077C MSS2P40990 351 aa1.08□□□□□ -2.24
VAM6YDL077C BUD6P41697 788 aa1.08□□□□□ -2.24
VAM6YDL077C VMA13P41807 478 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C CCT7P42943 550 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C YJL007CP47080 104 aa1.08□□□□□ -2.24
VAM6YDL077C MOG1P47123 218 aa1.08□□□□□ -2.24
VAM6YDL077C TOM22P49334 152 aa1.08□□□□□ -2.24
VAM6YDL077C CTF18P49956 741 aa1.08□□□□□ -2.24
VAM6YDL077C PAN2P53010 1115 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C MNT2P53059 558 aa1.08□□□□□ -2.24
VAM6YDL077C MTC3P53077 123 aa1.08□□□□□ -2.24
VAM6YDL077C HXT17P53631 564 aa1.08□□□□□ -2.24
VAM6YDL077C DSE4P53753 1117 aa1.08□□□□□ -2.24
VAM6YDL077C APM1Q00776 475 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C ACS1Q01574 713 aa1.08□□□□□ -2.24
VAM6YDL077C SED5Q01590 340 aa1.08□□□□□ -2.24
VAM6YDL077C PET117Q02771 107 aa1.08□□□□□ -2.24
VAM6YDL077C MUB1Q03162 620 aa1.08□□□□□ -2.24
VAM6YDL077C BUD22Q04347 519 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C CSI1Q04368 295 aa1.08□□□□□ -2.24
VAM6YDL077C YMR027WQ04371 470 aa1.08□□□□□ -2.24
VAM6YDL077C MYO5Q04439 1219 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C NSE3Q05541 303 aa1.08□□□□□ -2.24
VAM6YDL077C YLR283WQ05867 314 aa1.08□□□□□ -2.24
VAM6YDL077C PUF3Q07807 879 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 101.5 ms