RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C MSC7P38694 644 aa6.87□□□□□ -1.31
TDP1YBR223C MUP3P38734 546 aa6.87□□□□□ -1.31
TDP1YBR223C CYC2P38909 366 aa6.87□□□□□ -1.31
TDP1YBR223C AFG3P39925 761 aa6.87□□□□□ -1.31
TDP1YBR223C VAC8P39968 578 aa6.87□□□□□ -1.31
TDP1YBR223C YJR154WP47181 346 aa6.87□□□□□ -1.31
TDP1YBR223C MRX6P48564 524 aa6.87□□□□□ -1.31
TDP1YBR223C YGR053CP53234 283 aa6.87□□□□□ -1.31
TDP1YBR223C IBD2P53892 351 aa6.87□□□□□ -1.31
TDP1YBR223C REG1Q00816 1014 aa6.87□□□□□ -1.31
TDP1YBR223C TRE2Q08693 809 aa6.87□□□□□ -1.31
TDP1YBR223C LEA1Q08963 238 aaPredicted RBP6.87□□□□□ -1.31
TDP1YBR223C NUS1Q12063 375 aa6.87□□□□□ -1.31
TDP1YBR223C HUA2Q12134 243 aa6.87□□□□□ -1.31
TDP1YBR223C TIF6Q12522 245 aaKnown RBP6.87□□□□□ -1.31
TDP1YBR223C SEM1O94742 89 aa6.87□□□□□ -1.31
TDP1YBR223C BCY1P07278 416 aaKnown RBP6.87□□□□□ -1.31
TDP1YBR223C SEC53P07283 254 aaKnown RBP6.87□□□□□ -1.31
TDP1YBR223C SNF4P12904 322 aa6.87□□□□□ -1.31
TDP1YBR223C CLN1P20437 546 aa6.87□□□□□ -1.31
TDP1YBR223C DBR1P24309 405 aaKnown RBP6.87□□□□□ -1.31
TDP1YBR223C SPB1P25582 841 aaPredicted RBP6.87□□□□□ -1.31
TDP1YBR223C YCR099CP25657 155 aa6.87□□□□□ -1.31
TDP1YBR223C PEP12P32854 288 aa6.87□□□□□ -1.31
TDP1YBR223C CSE1P33307 960 aa6.87□□□□□ -1.31
TDP1YBR223C TIF3P34167 436 aaKnown RBP6.87□□□□□ -1.31
TDP1YBR223C SKT5P34226 696 aa6.87□□□□□ -1.31
TDP1YBR223C YKR015CP36111 568 aa6.87□□□□□ -1.31
TDP1YBR223C VRP1P37370 817 aa6.87□□□□□ -1.31
TDP1YBR223C IST2P38250 946 aa6.87□□□□□ -1.31
TDP1YBR223C SFB3P38810 929 aa6.87□□□□□ -1.31
TDP1YBR223C ECM10P39987 644 aa6.87□□□□□ -1.31
TDP1YBR223C ARB1P40024 610 aaKnown RBP6.87□□□□□ -1.31
TDP1YBR223C YEN1P40028 759 aa6.87□□□□□ -1.31
TDP1YBR223C RGI2P40188 164 aa6.87□□□□□ -1.31
TDP1YBR223C YNL033WP53964 284 aa6.87□□□□□ -1.31
TDP1YBR223C YNL019CP53975 284 aa6.87□□□□□ -1.31
TDP1YBR223C ECM22Q05958 814 aaPredicted RBP6.87□□□□□ -1.31
TDP1YBR223C PSR1Q07800 427 aa6.87□□□□□ -1.31
TDP1YBR223C YOR342CQ12182 319 aa6.87□□□□□ -1.31
TDP1YBR223C APM4Q99186 491 aa6.87□□□□□ -1.31
TDP1YBR223C CNA1P23287 553 aa6.86□□□□□ -1.31
TDP1YBR223C ERG6P25087 383 aaKnown RBP6.86□□□□□ -1.31
TDP1YBR223C PHO91P27514 894 aa6.86□□□□□ -1.31
TDP1YBR223C MDJ1P35191 511 aa6.86□□□□□ -1.31
TDP1YBR223C TFA2P36145 328 aa6.86□□□□□ -1.31
TDP1YBR223C YBR284WP38150 797 aa6.86□□□□□ -1.31
TDP1YBR223C SIF2P38262 535 aa6.86□□□□□ -1.31
TDP1YBR223C YBR225WP38321 900 aa6.86□□□□□ -1.31
TDP1YBR223C YHR202WP38887 602 aa6.86□□□□□ -1.31
TDP1YBR223C FAA2P39518 744 aa6.86□□□□□ -1.31
TDP1YBR223C YEL023CP39992 682 aa6.86□□□□□ -1.31
TDP1YBR223C IST3P40565 148 aaPredicted RBP6.86□□□□□ -1.31
TDP1YBR223C IMA5P40884 581 aa6.86□□□□□ -1.31
TDP1YBR223C YRB1P41920 201 aaKnown RBP6.86□□□□□ -1.31
TDP1YBR223C GCD14P46959 383 aaPredicted RBP6.86□□□□□ -1.31
TDP1YBR223C EMC2P47133 292 aaKnown RBP6.86□□□□□ -1.31
TDP1YBR223C VPS25P47142 202 aa6.86□□□□□ -1.31
TDP1YBR223C MRK1P50873 501 aa6.86□□□□□ -1.31
TDP1YBR223C STR3P53101 465 aaKnown RBP6.86□□□□□ -1.31
TDP1YBR223C GCN5Q03330 439 aa6.86□□□□□ -1.31
TDP1YBR223C GAS3Q03655 524 aa6.86□□□□□ -1.31
TDP1YBR223C SPO20Q04359 397 aa6.86□□□□□ -1.31
TDP1YBR223C BLS1Q06071 122 aa6.86□□□□□ -1.31
TDP1YBR223C ECM30Q06673 1274 aa6.86□□□□□ -1.31
TDP1YBR223C YDL121CQ07541 149 aa6.86□□□□□ -1.31
TDP1YBR223C AMD1P15274 810 aaKnown RBP6.85□□□□□ -1.31
TDP1YBR223C AAT2P23542 418 aaKnown RBP6.85□□□□□ -1.31
TDP1YBR223C DPB2P24482 689 aaPredicted RBP6.85□□□□□ -1.31
TDP1YBR223C CLB3P24870 427 aa6.85□□□□□ -1.31
TDP1YBR223C RAD51P25454 400 aa6.85□□□□□ -1.31
TDP1YBR223C IMP3P32899 183 aaPredicted RBP6.85□□□□□ -1.31
TDP1YBR223C MRP8P35719 219 aa6.85□□□□□ -1.31
TDP1YBR223C HMT1P38074 348 aa6.85□□□□□ -1.31
TDP1YBR223C ECM13P38195 257 aa6.85□□□□□ -1.31
TDP1YBR223C BRL1P38770 471 aa6.85□□□□□ -1.31
TDP1YBR223C OPT1P40897 799 aa6.85□□□□□ -1.31
TDP1YBR223C BST1P43571 1029 aa6.85□□□□□ -1.31
TDP1YBR223C MPS3P47069 682 aa6.85□□□□□ -1.31
TDP1YBR223C SAP4P53036 818 aa6.85□□□□□ -1.31
TDP1YBR223C PXR1P53335 271 aaPredicted RBP6.85□□□□□ -1.31
TDP1YBR223C TRM112P53738 135 aaPredicted RBP6.85□□□□□ -1.31
TDP1YBR223C ECM9Q02202 377 aa6.85□□□□□ -1.31
TDP1YBR223C SPP2Q02521 185 aa6.85□□□□□ -1.31
TDP1YBR223C YML131WQ03102 365 aa6.85□□□□□ -1.31
TDP1YBR223C YDR179W-AQ03983 463 aa6.85□□□□□ -1.31
TDP1YBR223C YCS4Q06156 1176 aa6.85□□□□□ -1.31
TDP1YBR223C RIF2Q06208 395 aa6.85□□□□□ -1.31
TDP1YBR223C SLF1Q12034 447 aaKnown RBP6.85□□□□□ -1.31
TDP1YBR223C VIK1Q12045 647 aa6.85□□□□□ -1.31
TDP1YBR223C YLR049CQ12110 428 aa6.85□□□□□ -1.31
TDP1YBR223C LCB4Q12246 624 aa6.85□□□□□ -1.31
TDP1YBR223C NTO1Q12311 748 aa6.85□□□□□ -1.31
TDP1YBR223C AHA1Q12449 350 aaKnown RBP6.85□□□□□ -1.31
TDP1YBR223C THP2O13539 261 aaKnown RBP6.84□□□□□ -1.31
TDP1YBR223C COR1P07256 457 aa6.84□□□□□ -1.31
TDP1YBR223C COS2P0CX12 379 aa6.84□□□□□ -1.31
TDP1YBR223C COS3P0CX13 379 aa6.84□□□□□ -1.31
TDP1YBR223C PMA2P19657 947 aa6.84□□□□□ -1.31
TDP1YBR223C YCK2P23292 546 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms