RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	LST4	P34239	828 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	DAD2	P36162	133 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	PCL7	P40186	285 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	ATF1	P40353	525 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	EFM4	P40516	257 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	PET130	P47065	347 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	YGR079W	P53249	370 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	DCP2	P53550	970 aa	Known RBP	5.11	□□□□□ -1.59
SMP1	YBR182C	RIA1	P53893	1110 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	ERG5	P54781	538 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	YAT1	P80235	687 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	USA1	Q03714	838 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	ARX1	Q03862	593 aa	Known RBP	5.11	□□□□□ -1.59
SMP1	YBR182C	DPB4	Q04603	196 aa	Known RBP	5.11	□□□□□ -1.59
SMP1	YBR182C	ARG7	Q04728	441 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	RGC1	Q06108	1083 aa	Known RBP	5.11	□□□□□ -1.59
SMP1	YBR182C	ENB1	Q08299	606 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	BAG7	Q12128	409 aa		5.11	□□□□□ -1.59
SMP1	YBR182C	RPN5	Q12250	445 aa	Known RBP	5.11	□□□□□ -1.59
SMP1	YBR182C	FUB1	P25659	250 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	MSP1	P28737	362 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	SIP1	P32578	815 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	MRE11	P32829	692 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	SEF1	P34228	1148 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	CCL1	P37366	393 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	ARO9	P38840	513 aa	Predicted RBP	5.1	□□□□□ -1.59
SMP1	YBR182C	MAF1	P41910	395 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	HXT14	P42833	540 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	IRC8	P47046	822 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	UBX6	P47049	396 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	MDE1	P47095	244 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	UBC11	P52492	156 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	YGR111W	P53265	400 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	TOF1	P53840	1238 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	DAK1	P54838	584 aa	Known RBP	5.1	□□□□□ -1.59
SMP1	YBR182C	RPA49	Q01080	415 aa	Predicted RBP	5.1	□□□□□ -1.59
SMP1	YBR182C	MFM1	Q02783	413 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	RSM28	Q03430	361 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	MRI1	Q06489	411 aa	Known RBP	5.1	□□□□□ -1.59
SMP1	YBR182C	GPN2	Q08726	347 aa	Predicted RBP	5.1	□□□□□ -1.59
SMP1	YBR182C	ISN1	Q99312	450 aa		5.1	□□□□□ -1.59
SMP1	YBR182C	MF(ALPHA)1	P01149	165 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	PDA1	P16387	420 aa	Known RBP	5.09	□□□□□ -1.59
SMP1	YBR182C	CDC5	P32562	705 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	GYP6	P32806	458 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	SEC66	P33754	206 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	LTV1	P34078	463 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	ELF1	P36053	145 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	TCD2	P36101	447 aa	Known RBP	5.09	□□□□□ -1.59
SMP1	YBR182C	HEL1	P36113	551 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	YBR053C	P38235	358 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	BUR6	P40096	142 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	ALG5	P40350	334 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	PKP1	P40530	394 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	CCT7	P42943	550 aa	Known RBP	5.09	□□□□□ -1.59
SMP1	YBR182C	PAN2	P53010	1115 aa	Predicted RBP	5.09	□□□□□ -1.59
SMP1	YBR182C	MNP1	P53163	194 aa	Predicted RBP	5.09	□□□□□ -1.59
SMP1	YBR182C	FHN1	P53279	174 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	HOT1	Q03213	719 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	SOV1	Q04748	898 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	DON1	Q05610	365 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	YLR456W	Q06199	204 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	YSH1	Q06224	779 aa	Predicted RBP	5.09	□□□□□ -1.59
SMP1	YBR182C	DCI1	Q08558	271 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	YPL216W	Q08964	1102 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	SEC39	Q12745	709 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	YKL033W-A	Q86ZR7	236 aa		5.09	□□□□□ -1.59
SMP1	YBR182C	TRP4	P07285	380 aa	Predicted RBP	5.08	□□□□□ -1.6
SMP1	YBR182C	RPC40	P07703	335 aa	Known RBP	5.08	□□□□□ -1.6
SMP1	YBR182C	KGD2	P19262	463 aa	Predicted RBP	5.08	□□□□□ -1.6
SMP1	YBR182C	APN1	P22936	367 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	PHO84	P25297	587 aa	Known RBP	5.08	□□□□□ -1.6
SMP1	YBR182C	ADH7	P25377	361 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	NIP100	P33420	868 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	HIS7	P33734	552 aa	Known RBP	5.08	□□□□□ -1.6
SMP1	YBR182C	WBP1	P33767	430 aa	Known RBP	5.08	□□□□□ -1.6
SMP1	YBR182C	HCS1	P34243	683 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	RPF2	P36160	344 aa	Known RBP	5.08	□□□□□ -1.6
SMP1	YBR182C	SIF2	P38262	535 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	GND1	P38720	489 aa	Known RBP	5.08	□□□□□ -1.6
SMP1	YBR182C	YHR097C	P38809	366 aa	Known RBP	5.08	□□□□□ -1.6
SMP1	YBR182C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
SMP1	YBR182C	ELO3	P40319	345 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	HST1	P53685	503 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	YNL144C	P53907	740 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	FIN1	Q03898	291 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	MMR1	Q06324	491 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	SWA2	Q06677	668 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	YDL073W	Q07454	984 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	YDL086W	Q07505	273 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	TGS1	Q12052	315 aa		5.08	□□□□□ -1.6
SMP1	YBR182C	YML133C	Q03099	1374 aa		5.07	□□□□□ -1.6
SMP1	YBR182C	YLL067C	Q07888	1374 aa		5.07	□□□□□ -1.6
SMP1	YBR182C	YLL066C	Q99208	1374 aa		5.07	□□□□□ -1.6
SMP1	YBR182C	RPL6B	P05739	176 aa	Known RBP	5.07	□□□□□ -1.6
SMP1	YBR182C	RPL3	P14126	387 aa	Known RBP	5.07	□□□□□ -1.6
SMP1	YBR182C	PMI40	P29952	429 aa	Known RBP	5.07	□□□□□ -1.6
SMP1	YBR182C	LOT5	P34234	306 aa		5.07	□□□□□ -1.6
SMP1	YBR182C	PHO11	P35842	467 aa		5.07	□□□□□ -1.6
SMP1	YBR182C	GDT1	P38301	280 aa	Predicted RBP	5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms