RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W CCT7P42943 550 aaKnown RBP3.03□□□□□ -1.92
SWD3YBR175W FET5P43561 622 aa3.03□□□□□ -1.92
SWD3YBR175W CAK1P43568 368 aaPredicted RBP3.03□□□□□ -1.92
SWD3YBR175W CTK2P46962 323 aa3.03□□□□□ -1.92
SWD3YBR175W PET130P47065 347 aa3.03□□□□□ -1.92
SWD3YBR175W CTR1P49573 406 aa3.03□□□□□ -1.92
SWD3YBR175W YGR054WP53235 642 aaKnown RBP3.03□□□□□ -1.92
SWD3YBR175W SNF12P53628 566 aa3.03□□□□□ -1.92
SWD3YBR175W YNR068CP53754 272 aa3.03□□□□□ -1.92
SWD3YBR175W TIM11P81449 96 aaPredicted RBP3.03□□□□□ -1.92
SWD3YBR175W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
SWD3YBR175W YDR239CQ03780 787 aa3.03□□□□□ -1.92
SWD3YBR175W BUD22Q04347 519 aaKnown RBP3.03□□□□□ -1.92
SWD3YBR175W VPS38Q05919 439 aa3.03□□□□□ -1.92
SWD3YBR175W RGC1Q06108 1083 aaKnown RBP3.03□□□□□ -1.92
SWD3YBR175W MLH2Q07980 695 aa3.03□□□□□ -1.92
SWD3YBR175W GPN2Q08726 347 aaPredicted RBP3.03□□□□□ -1.92
SWD3YBR175W YPL272CQ08984 517 aa3.03□□□□□ -1.92
SWD3YBR175W PSY3Q12318 242 aa3.03□□□□□ -1.92
SWD3YBR175W RRP36Q12481 300 aaPredicted RBP3.03□□□□□ -1.92
SWD3YBR175W CTF3Q12748 733 aa3.03□□□□□ -1.92
SWD3YBR175W TY1B-DR4Q07793 1604 aa3.03□□□□□ -1.92
SWD3YBR175W BPT1P14772 1559 aa3.03□□□□□ -1.92
SWD3YBR175W GAL80P04387 435 aa3.02□□□□□ -1.93
SWD3YBR175W TPK2P06245 380 aa3.02□□□□□ -1.93
SWD3YBR175W ARD1P07347 238 aaPredicted RBP3.02□□□□□ -1.93
SWD3YBR175W EST1P17214 699 aaPredicted RBP3.02□□□□□ -1.93
SWD3YBR175W PHO84P25297 587 aaKnown RBP3.02□□□□□ -1.93
SWD3YBR175W ERG4P25340 473 aa3.02□□□□□ -1.93
SWD3YBR175W YEL043WP32618 956 aa3.02□□□□□ -1.93
SWD3YBR175W PMT1P33775 817 aa3.02□□□□□ -1.93
SWD3YBR175W SEF1P34228 1148 aa3.02□□□□□ -1.93
SWD3YBR175W LOT5P34234 306 aa3.02□□□□□ -1.93
SWD3YBR175W CMC1P36064 111 aa3.02□□□□□ -1.93
SWD3YBR175W DAD2P36162 133 aa3.02□□□□□ -1.93
SWD3YBR175W AGP2P38090 596 aa3.02□□□□□ -1.93
SWD3YBR175W RRT2P38332 387 aa3.02□□□□□ -1.93
SWD3YBR175W FMO1P38866 432 aa3.02□□□□□ -1.93
SWD3YBR175W REV7P38927 245 aa3.02□□□□□ -1.93
SWD3YBR175W NUP60P39705 539 aa3.02□□□□□ -1.93
SWD3YBR175W PIG2P40187 538 aa3.02□□□□□ -1.93
SWD3YBR175W VMA13P41807 478 aaKnown RBP3.02□□□□□ -1.93
SWD3YBR175W DLD2P46681 530 aaKnown RBP3.02□□□□□ -1.93
SWD3YBR175W VID30P53076 958 aa3.02□□□□□ -1.93
SWD3YBR175W STR3P53101 465 aaKnown RBP3.02□□□□□ -1.93
SWD3YBR175W RNT1Q02555 471 aa3.02□□□□□ -1.93
SWD3YBR175W KAP120Q02932 1032 aa3.02□□□□□ -1.93
SWD3YBR175W YML122CQ03207 126 aa3.02□□□□□ -1.93
SWD3YBR175W TLG1Q03322 224 aa3.02□□□□□ -1.93
SWD3YBR175W USA1Q03714 838 aa3.02□□□□□ -1.93
SWD3YBR175W YMR111CQ04461 462 aaPredicted RBP3.02□□□□□ -1.93
SWD3YBR175W SOV1Q04748 898 aa3.02□□□□□ -1.93
SWD3YBR175W SPH1Q06160 661 aa3.02□□□□□ -1.93
SWD3YBR175W YLR040CQ07988 224 aa3.02□□□□□ -1.93
SWD3YBR175W CDC45Q08032 650 aa3.02□□□□□ -1.93
SWD3YBR175W BMS1Q08965 1183 aaKnown RBP3.02□□□□□ -1.93
SWD3YBR175W PRS5Q12265 496 aaKnown RBP3.02□□□□□ -1.93
SWD3YBR175W CEX1Q12453 761 aa3.02□□□□□ -1.93
SWD3YBR175W AVL9Q12500 764 aa3.02□□□□□ -1.93
SWD3YBR175W MYO2P19524 1574 aaKnown RBP3.02□□□□□ -1.93
SWD3YBR175W BUD4P47136 1447 aa3.02□□□□□ -1.93
SWD3YBR175W YML133CQ03099 1374 aa3.01□□□□□ -1.93
SWD3YBR175W YLL067CQ07888 1374 aa3.01□□□□□ -1.93
SWD3YBR175W YLL066CQ99208 1374 aa3.01□□□□□ -1.93
SWD3YBR175W RPL3P14126 387 aaKnown RBP3.01□□□□□ -1.93
SWD3YBR175W PDE1P22434 369 aa3.01□□□□□ -1.93
SWD3YBR175W RFA2P26754 273 aaKnown RBP3.01□□□□□ -1.93
SWD3YBR175W CDC15P27636 974 aa3.01□□□□□ -1.93
SWD3YBR175W BUD14P27637 709 aa3.01□□□□□ -1.93
SWD3YBR175W PDB1P32473 366 aaKnown RBP3.01□□□□□ -1.93
SWD3YBR175W LTV1P34078 463 aa3.01□□□□□ -1.93
SWD3YBR175W MRPL7P36519 292 aa3.01□□□□□ -1.93
SWD3YBR175W THI2P38141 450 aa3.01□□□□□ -1.93
SWD3YBR175W ARO9P38840 513 aaPredicted RBP3.01□□□□□ -1.93
SWD3YBR175W OSW5P40219 148 aa3.01□□□□□ -1.93
SWD3YBR175W FKH2P41813 862 aa3.01□□□□□ -1.93
SWD3YBR175W BAP3P41815 604 aa3.01□□□□□ -1.93
SWD3YBR175W HXT14P42833 540 aa3.01□□□□□ -1.93
SWD3YBR175W AMA1P50082 593 aa3.01□□□□□ -1.93
SWD3YBR175W IMO32P53219 342 aa3.01□□□□□ -1.93
SWD3YBR175W YGR079WP53249 370 aa3.01□□□□□ -1.93
SWD3YBR175W TWF1P53250 332 aa3.01□□□□□ -1.93
SWD3YBR175W YGR111WP53265 400 aa3.01□□□□□ -1.93
SWD3YBR175W ERV25P54837 211 aaKnown RBP3.01□□□□□ -1.93
SWD3YBR175W PRO2P54885 456 aaKnown RBP3.01□□□□□ -1.93
SWD3YBR175W INA17Q02888 182 aa3.01□□□□□ -1.93
SWD3YBR175W DLT1Q04216 342 aa3.01□□□□□ -1.93
SWD3YBR175W HEL2Q05580 639 aaKnown RBP3.01□□□□□ -1.93
SWD3YBR175W DON1Q05610 365 aa3.01□□□□□ -1.93
SWD3YBR175W DBP9Q06218 594 aaKnown RBP3.01□□□□□ -1.93
SWD3YBR175W ATG23Q06671 453 aa3.01□□□□□ -1.93
SWD3YBR175W PML1Q07930 204 aaPredicted RBP3.01□□□□□ -1.93
SWD3YBR175W YOL073CQ08232 322 aa3.01□□□□□ -1.93
SWD3YBR175W FRE5Q08908 694 aa3.01□□□□□ -1.93
SWD3YBR175W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
SWD3YBR175W CHS5Q12114 671 aaKnown RBP3.01□□□□□ -1.93
SWD3YBR175W MDY2Q12285 212 aa3.01□□□□□ -1.93
SWD3YBR175W YBR255C-AQ3E776 120 aa3.01□□□□□ -1.93
SWD3YBR175W TCB3Q03640 1545 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W PPR1P07272 904 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms