RNA–Protein interactions for RNA: YBR073W

RDH54, Transcript of DNA-dependent ATPase, yeast

Gene RDH54, Length 2,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RDH54	YBR073W	URH1	Q04179	340 aa		4.15	□□□□□ -1.75
RDH54	YBR073W	RKM1	Q08961	583 aa	Predicted RBP	4.15	□□□□□ -1.75
RDH54	YBR073W	ENV7	Q12003	364 aa		4.15	□□□□□ -1.75
RDH54	YBR073W	ATG31	Q12421	196 aa		4.15	□□□□□ -1.75
RDH54	YBR073W	CDC19	P00549	500 aa	Known RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	MSF1	P08425	469 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	GEX1	P25596	615 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	PEX3	P28795	441 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	ADD66	P36040	267 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	YKL151C	P36059	337 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	KAP104	P38217	918 aa	Known RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	MCX1	P38323	520 aa	Predicted RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	EGD2	P38879	174 aa	Known RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	SER3	P40054	469 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	DSN1	P40568	576 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	CEP3	P40969	608 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	DIA3	P52290	468 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	CUE3	P53137	624 aa	Known RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	UTP6	Q02354	440 aa	Known RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	YDC1	Q02896	317 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	PPN1	Q04119	674 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	IWR1	Q07532	353 aa	Predicted RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	SOG2	Q08817	791 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	SLP1	Q12232	587 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	NDJ1	Q12366	352 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	SEC39	Q12745	709 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	HIR3	P47171	1648 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	VPS63	O13549	108 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	KIN2	P13186	1147 aa	Known RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	TAL1	P15019	335 aa	Known RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	YCR016W	P25617	290 aa	Known RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	TGL1	P34163	548 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	ERC1	P38767	581 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	PNT1	P38969	423 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	VMA10	P48836	114 aa	Known RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	NCE103	P53615	221 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	MAK10	Q02197	733 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	RKM2	Q03942	479 aa		4.14	□□□□□ -1.75
RDH54	YBR073W	HMO1	Q03973	246 aa	Known RBP	4.14	□□□□□ -1.75
RDH54	YBR073W	YML002W	P0CF17	737 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	PWP1	P21304	576 aa	Known RBP	4.13	□□□□□ -1.75
RDH54	YBR073W	BCK2	P33306	851 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	SFB3	P38810	929 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	SHC1	P39000	512 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	PCL6	P40038	420 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	PRP31	P49704	494 aa	Predicted RBP	4.13	□□□□□ -1.75
RDH54	YBR073W	CAF130	P53280	1122 aa	Predicted RBP	4.13	□□□□□ -1.75
RDH54	YBR073W	SLI1	P53304	468 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	RTT102	P53330	157 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	YNR071C	P53757	342 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	RRP17	Q04031	235 aa	Predicted RBP	4.13	□□□□□ -1.75
RDH54	YBR073W	RBS1	Q05672	457 aa	Known RBP	4.13	□□□□□ -1.75
RDH54	YBR073W	YLR297W	Q05899	129 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	RDR1	Q08904	546 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
RDH54	YBR073W	SKM1	Q12469	655 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	AMS1	P22855	1083 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	EMC3	P36039	253 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	REV7	P38927	245 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	SSO2	P39926	295 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	LSB6	P42951	607 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	BST1	P43571	1029 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	EMC2	P47133	292 aa	Known RBP	4.13	□□□□□ -1.75
RDH54	YBR073W	UBC9	P50623	157 aa	Predicted RBP	4.13	□□□□□ -1.75
RDH54	YBR073W	INN1	P53901	409 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	NHX1	Q04121	633 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	SPC24	Q04477	213 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	GFD1	Q04839	188 aa	Known RBP	4.13	□□□□□ -1.75
RDH54	YBR073W	ENT4	Q07872	247 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	GEP3	Q08622	556 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	INP53	Q12271	1107 aa		4.13	□□□□□ -1.75
RDH54	YBR073W	YLL067C	Q07888	1374 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	CBS1	P14066	229 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	SPO23	P33757	523 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	SRP68	P38687	599 aa	Known RBP	4.12	□□□□□ -1.75
RDH54	YBR073W	RTC3	P38804	111 aa	Predicted RBP	4.12	□□□□□ -1.75
RDH54	YBR073W	SBE22	P38814	852 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	UBP9	P39967	754 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	ULP2	P40537	1034 aa	Predicted RBP	4.12	□□□□□ -1.75
RDH54	YBR073W	TOS3	P43637	560 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	SNX4	P47057	423 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	PET130	P47065	347 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	YKE2	P52553	114 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	DIA1	P54005	336 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	NGL2	Q03264	515 aa	Known RBP	4.12	□□□□□ -1.75
RDH54	YBR073W	MET7	Q08645	548 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	SKI3	P17883	1432 aa	Known RBP	4.12	□□□□□ -1.75
RDH54	YBR073W	PHO5	P00635	467 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	GCD2	P12754	651 aa	Predicted RBP	4.12	□□□□□ -1.75
RDH54	YBR073W	FRS1	P15624	595 aa	Known RBP	4.12	□□□□□ -1.75
RDH54	YBR073W	APE3	P37302	537 aa	Known RBP	4.12	□□□□□ -1.75
RDH54	YBR073W	AHP1	P38013	176 aa	Known RBP	4.12	□□□□□ -1.75
RDH54	YBR073W	PET100	P38958	111 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	TMA22	P47089	198 aa	Predicted RBP	4.12	□□□□□ -1.75
RDH54	YBR073W	SSN8	P47821	323 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	NIT3	P49954	291 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	AIM33	Q04516	312 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	VPS36	Q06696	566 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	VIK1	Q12045	647 aa		4.12	□□□□□ -1.75
RDH54	YBR073W	VAM3	Q12241	283 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms