RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W YOR019WQ99248 730 aa2.3□□□□□ -2.04
NUP170YBL079W NPR1P22211 790 aa2.29□□□□□ -2.04
NUP170YBL079W SPO11P23179 398 aa2.29□□□□□ -2.04
NUP170YBL079W SLX5P32828 619 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W IMP3P32899 183 aaPredicted RBP2.29□□□□□ -2.04
NUP170YBL079W TIP20P33891 701 aa2.29□□□□□ -2.04
NUP170YBL079W VHC1P38329 1120 aa2.29□□□□□ -2.04
NUP170YBL079W LTP1P40347 161 aa2.29□□□□□ -2.04
NUP170YBL079W GLG2P47011 380 aa2.29□□□□□ -2.04
NUP170YBL079W CCT8P47079 568 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W STR3P53101 465 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W YNL040WP53960 456 aaPredicted RBP2.29□□□□□ -2.04
NUP170YBL079W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
NUP170YBL079W VPS20Q04272 221 aa2.29□□□□□ -2.04
NUP170YBL079W ENT4Q07872 247 aa2.29□□□□□ -2.04
NUP170YBL079W PIN2Q12057 282 aa2.29□□□□□ -2.04
NUP170YBL079W CAR2P07991 424 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W ASC1P38011 319 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W GPI16P38875 610 aa2.29□□□□□ -2.04
NUP170YBL079W SSN3P39073 555 aa2.29□□□□□ -2.04
NUP170YBL079W YIL108WP40483 696 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W EMW1P42842 904 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W YML6P51998 286 aa2.29□□□□□ -2.04
NUP170YBL079W MPS2P53159 387 aa2.29□□□□□ -2.04
NUP170YBL079W MAL12P53341 584 aa2.29□□□□□ -2.04
NUP170YBL079W IRC15Q02733 499 aa2.29□□□□□ -2.04
NUP170YBL079W MTQ2Q03920 221 aaPredicted RBP2.29□□□□□ -2.04
NUP170YBL079W VHS3Q08438 674 aa2.29□□□□□ -2.04
NUP170YBL079W YOR214CQ12282 236 aa2.29□□□□□ -2.04
NUP170YBL079W BCY1P07278 416 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W SWI5P08153 709 aa2.29□□□□□ -2.04
NUP170YBL079W SNF5P18480 905 aa2.29□□□□□ -2.04
NUP170YBL079W PBN1P25580 416 aa2.29□□□□□ -2.04
NUP170YBL079W PMT2P31382 759 aa2.29□□□□□ -2.04
NUP170YBL079W SMI1P32566 505 aa2.29□□□□□ -2.04
NUP170YBL079W RML2P32611 393 aa2.29□□□□□ -2.04
NUP170YBL079W UGP1P32861 499 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W STE5P32917 917 aa2.29□□□□□ -2.04
NUP170YBL079W UTH1P36135 365 aa2.29□□□□□ -2.04
NUP170YBL079W ARL1P38116 183 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W RVS167P39743 482 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W NDC80P40460 691 aa2.29□□□□□ -2.04
NUP170YBL079W URB2P47108 1174 aa2.29□□□□□ -2.04
NUP170YBL079W AAD10P47182 288 aa2.29□□□□□ -2.04
NUP170YBL079W SDT1P53078 280 aa2.29□□□□□ -2.04
NUP170YBL079W HXT17P53631 564 aa2.29□□□□□ -2.04
NUP170YBL079W NRM1P53718 249 aa2.29□□□□□ -2.04
NUP170YBL079W KTR5P53966 522 aaPredicted RBP2.29□□□□□ -2.04
NUP170YBL079W KTR6P54070 446 aa2.29□□□□□ -2.04
NUP170YBL079W RPN9Q04062 393 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W AKR2Q12013 749 aa2.29□□□□□ -2.04
NUP170YBL079W VPS54Q12071 889 aa2.29□□□□□ -2.04
NUP170YBL079W FAL1Q12099 399 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W NSI1Q12457 570 aa2.29□□□□□ -2.04
NUP170YBL079W IMG1P25626 169 aa2.29□□□□□ -2.04
NUP170YBL079W MRP21P38175 177 aa2.29□□□□□ -2.04
NUP170YBL079W DED81P38707 554 aaKnown RBP2.29□□□□□ -2.04
NUP170YBL079W ERC1P38767 581 aa2.29□□□□□ -2.04
NUP170YBL079W SPT8P38915 602 aa2.29□□□□□ -2.04
NUP170YBL079W ALG8P40351 577 aa2.29□□□□□ -2.04
NUP170YBL079W VAC7P53950 1165 aa2.29□□□□□ -2.04
NUP170YBL079W ARA2Q04212 335 aa2.29□□□□□ -2.04
NUP170YBL079W SPO75Q07798 868 aa2.29□□□□□ -2.04
NUP170YBL079W NDD1Q08887 554 aa2.29□□□□□ -2.04
NUP170YBL079W RPL43AP0CX25 92 aaKnown RBP2.28□□□□□ -2.04
NUP170YBL079W RPL43BP0CX26 92 aa2.28□□□□□ -2.04
NUP170YBL079W GPA2P10823 449 aa2.28□□□□□ -2.04
NUP170YBL079W HSF1P10961 833 aa2.28□□□□□ -2.04
NUP170YBL079W BAS1P22035 811 aa2.28□□□□□ -2.04
NUP170YBL079W MVD1P32377 396 aaKnown RBP2.28□□□□□ -2.04
NUP170YBL079W PET127P32606 800 aa2.28□□□□□ -2.04
NUP170YBL079W GMH1P36125 273 aa2.28□□□□□ -2.04
NUP170YBL079W POP4P38336 279 aa2.28□□□□□ -2.04
NUP170YBL079W NDE1P40215 560 aa2.28□□□□□ -2.04
NUP170YBL079W MVP1P40959 511 aaKnown RBP2.28□□□□□ -2.04
NUP170YBL079W YGR237CP50089 785 aa2.28□□□□□ -2.04
NUP170YBL079W PIR1Q03178 341 aa2.28□□□□□ -2.04
NUP170YBL079W RRP15Q06511 250 aaPredicted RBP2.28□□□□□ -2.04
NUP170YBL079W OMS1Q06668 471 aa2.28□□□□□ -2.04
NUP170YBL079W PEX15Q08215 383 aa2.28□□□□□ -2.04
NUP170YBL079W WSC3Q12215 556 aa2.28□□□□□ -2.04
NUP170YBL079W RUD3Q12234 484 aaKnown RBP2.28□□□□□ -2.04
NUP170YBL079W TAO3P40468 2376 aa2.28□□□□□ -2.04
NUP170YBL079W COX13P32799 129 aa2.28□□□□□ -2.04
NUP170YBL079W KES1P35844 434 aaKnown RBP2.28□□□□□ -2.04
NUP170YBL079W OLA1P38219 394 aaKnown RBP2.28□□□□□ -2.04
NUP170YBL079W TAE1P38340 232 aa2.28□□□□□ -2.04
NUP170YBL079W HAT2P39984 401 aa2.28□□□□□ -2.04
NUP170YBL079W SER3P40054 469 aa2.28□□□□□ -2.04
NUP170YBL079W MAD2P40958 196 aa2.28□□□□□ -2.04
NUP170YBL079W STB4P50104 949 aa2.28□□□□□ -2.04
NUP170YBL079W SPP2Q02521 185 aa2.28□□□□□ -2.04
NUP170YBL079W AIR2Q12476 344 aaKnown RBP2.28□□□□□ -2.04
NUP170YBL079W MDN1Q12019 4910 aaKnown RBP2.28□□□□□ -2.04
NUP170YBL079W YLR422WQ06409 1932 aa2.28□□□□□ -2.04
NUP170YBL079W LAA1P39526 2014 aa2.28□□□□□ -2.04
NUP170YBL079W MET2P08465 486 aa2.28□□□□□ -2.04
NUP170YBL079W RPB2P08518 1224 aaKnown RBP2.28□□□□□ -2.04
NUP170YBL079W RPL1AP0CX43 217 aaKnown RBP2.28□□□□□ -2.04
NUP170YBL079W RPL1BP0CX44 217 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms