RNA–Protein interactions for RNA: YBL005W-B

YBL005W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YBL005W-B, Length 5,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBL005W-BYBL005W-B SIL1Q08199 421 aa2.54□□□□□ -2
YBL005W-BYBL005W-B BRX1Q08235 291 aaKnown RBP2.54□□□□□ -2
YBL005W-BYBL005W-B YSP2Q06681 1438 aa2.53□□□□□ -2
YBL005W-BYBL005W-B YCF1P39109 1515 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B KAR3P17119 729 aa2.53□□□□□ -2
YBL005W-BYBL005W-B RIT1P23796 513 aa2.53□□□□□ -2
YBL005W-BYBL005W-B NAM9P27929 486 aa2.53□□□□□ -2
YBL005W-BYBL005W-B BCS1P32839 456 aa2.53□□□□□ -2
YBL005W-BYBL005W-B DHR2P36009 735 aaPredicted RBP2.53□□□□□ -2
YBL005W-BYBL005W-B VRG4P40107 337 aa2.53□□□□□ -2
YBL005W-BYBL005W-B LAS21P40367 830 aa2.53□□□□□ -2
YBL005W-BYBL005W-B PXA1P41909 870 aa2.53□□□□□ -2
YBL005W-BYBL005W-B GZF3P42944 551 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B CAF16P43569 289 aa2.53□□□□□ -2
YBL005W-BYBL005W-B STR2P47164 639 aa2.53□□□□□ -2
YBL005W-BYBL005W-B IST1P53843 298 aaPredicted RBP2.53□□□□□ -2
YBL005W-BYBL005W-B RPT6Q01939 405 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B MDM36Q06820 579 aa2.53□□□□□ -2
YBL005W-BYBL005W-B PML1Q07930 204 aaPredicted RBP2.53□□□□□ -2
YBL005W-BYBL005W-B RIB2Q12362 591 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B ALG7P07286 448 aa2.53□□□□□ -2
YBL005W-BYBL005W-B HSP60P19882 572 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B YKR015CP36111 568 aa2.53□□□□□ -2
YBL005W-BYBL005W-B RTC2P38279 296 aa2.53□□□□□ -2
YBL005W-BYBL005W-B YSW1P38280 609 aa2.53□□□□□ -2
YBL005W-BYBL005W-B ULP2P40537 1034 aaPredicted RBP2.53□□□□□ -2
YBL005W-BYBL005W-B GAB1P41733 394 aa2.53□□□□□ -2
YBL005W-BYBL005W-B HOT1Q03213 719 aa2.53□□□□□ -2
YBL005W-BYBL005W-B HED1Q03937 162 aa2.53□□□□□ -2
YBL005W-BYBL005W-B PUS7Q08647 676 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B NIP7Q08962 181 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B FLC1Q08967 793 aa2.53□□□□□ -2
YBL005W-BYBL005W-B CHS5Q12114 671 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B APC2Q12440 853 aa2.53□□□□□ -2
YBL005W-BYBL005W-B SAC3P46674 1301 aa2.53□□□□□ -2
YBL005W-BYBL005W-B SUC2P00724 532 aa2.53□□□□□ -2
YBL005W-BYBL005W-B CAR1P00812 333 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B POX1P13711 748 aa2.53□□□□□ -2
YBL005W-BYBL005W-B SPO7P18410 259 aa2.53□□□□□ -2
YBL005W-BYBL005W-B KIN3P22209 435 aa2.53□□□□□ -2
YBL005W-BYBL005W-B LCB1P25045 558 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B YDJ1P25491 409 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B PHA2P32452 334 aa2.53□□□□□ -2
YBL005W-BYBL005W-B SFC1P33303 322 aa2.53□□□□□ -2
YBL005W-BYBL005W-B TGL1P34163 548 aa2.53□□□□□ -2
YBL005W-BYBL005W-B SET5P38890 526 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B YJR124CP47159 448 aa2.53□□□□□ -2
YBL005W-BYBL005W-B YGR012WP53206 393 aa2.53□□□□□ -2
YBL005W-BYBL005W-B SYF2P53277 215 aaPredicted RBP2.53□□□□□ -2
YBL005W-BYBL005W-B YNR068CP53754 272 aa2.53□□□□□ -2
YBL005W-BYBL005W-B SEC5P89102 971 aa2.53□□□□□ -2
YBL005W-BYBL005W-B YMR102CQ03177 834 aa2.53□□□□□ -2
YBL005W-BYBL005W-B HAS1Q03532 505 aaKnown RBP2.53□□□□□ -2
YBL005W-BYBL005W-B ADI1Q03677 179 aa2.53□□□□□ -2
YBL005W-BYBL005W-B TRS120Q04183 1289 aa2.53□□□□□ -2
YBL005W-BYBL005W-B TDA9Q04545 1251 aa2.53□□□□□ -2
YBL005W-BYBL005W-B RPL40AP0CH08 128 aaKnown RBP2.53□□□□□ -2.01
YBL005W-BYBL005W-B RPL40BP0CH09 128 aaKnown RBP2.53□□□□□ -2.01
YBL005W-BYBL005W-B HMG1P12683 1054 aa2.53□□□□□ -2.01
YBL005W-BYBL005W-B REC107P21651 314 aa2.53□□□□□ -2.01
YBL005W-BYBL005W-B RNA14P25298 677 aaKnown RBP2.53□□□□□ -2.01
YBL005W-BYBL005W-B TPS2P31688 896 aaKnown RBP2.53□□□□□ -2.01
YBL005W-BYBL005W-B YME2P32843 850 aa2.53□□□□□ -2.01
YBL005W-BYBL005W-B LTV1P34078 463 aa2.53□□□□□ -2.01
YBL005W-BYBL005W-B SIF2P38262 535 aa2.53□□□□□ -2.01
YBL005W-BYBL005W-B RCK2P38623 610 aa2.53□□□□□ -2.01
YBL005W-BYBL005W-B KTR7P40504 517 aa2.53□□□□□ -2.01
YBL005W-BYBL005W-B DCP2P53550 970 aaKnown RBP2.53□□□□□ -2.01
YBL005W-BYBL005W-B ARG5,6Q01217 863 aa2.53□□□□□ -2.01
YBL005W-BYBL005W-B USA1Q03714 838 aa2.53□□□□□ -2.01
YBL005W-BYBL005W-B SNU56Q03782 492 aaKnown RBP2.53□□□□□ -2.01
YBL005W-BYBL005W-B MSF1P08425 469 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B LDB16P25587 256 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B HYM1P32464 399 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B AHP1P38013 176 aaKnown RBP2.52□□□□□ -2.01
YBL005W-BYBL005W-B PZF1P39933 429 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B TED1P40533 473 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B RRP45Q05636 305 aaKnown RBP2.52□□□□□ -2.01
YBL005W-BYBL005W-B SEC10Q06245 871 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B GET4Q12125 312 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B NOP56Q12460 504 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
YBL005W-BYBL005W-B RRP12Q12754 1228 aaKnown RBP2.52□□□□□ -2.01
YBL005W-BYBL005W-B YBL111CQ3E7Y5 667 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B TPK2P06245 380 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B MET8P15807 274 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B THR4P16120 514 aaKnown RBP2.52□□□□□ -2.01
YBL005W-BYBL005W-B ERG1P32476 496 aaKnown RBP2.52□□□□□ -2.01
YBL005W-BYBL005W-B SPR1P32603 445 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B GYP6P32806 458 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B EDS1P38073 919 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B CBR1P38626 284 aaKnown RBP2.52□□□□□ -2.01
YBL005W-BYBL005W-B RPS20P38701 121 aaKnown RBP2.52□□□□□ -2.01
YBL005W-BYBL005W-B YHL050CP38721 697 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B PKP1P40530 394 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B POL32P47110 350 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B HST1P53685 503 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B SND1Q04007 877 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B DON1Q05610 365 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B ECM7Q06200 448 aa2.52□□□□□ -2.01
YBL005W-BYBL005W-B ECM30Q06673 1274 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms