RNA–Protein interactions for RNA: ENST00000598775.1

SPTBN4-213, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 3

Gene SPTBN4, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-213ENST00000598775 ERC2O15083 957 aa18.25■□□□□ 0.51
SPTBN4-213ENST00000598775 GPAA1O43292 621 aa18.25■□□□□ 0.51
SPTBN4-213ENST00000598775 COBLO75128 1261 aa18.25■□□□□ 0.51
SPTBN4-213ENST00000598775 RIOX2Q8IUF8 465 aa18.25■□□□□ 0.51
SPTBN4-213ENST00000598775 TRPV1Q8NER1 839 aa18.25■□□□□ 0.51
SPTBN4-213ENST00000598775 PI4K2BQ8TCG2 481 aa18.25■□□□□ 0.51
SPTBN4-213ENST00000598775 ZNF287Q9HBT7 754 aa18.25■□□□□ 0.51
SPTBN4-213ENST00000598775 PPP1R9AQ9ULJ8 1098 aa18.25■□□□□ 0.51
SPTBN4-213ENST00000598775 COL11A1P12107 1806 aaPredicted RBP18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 IGKV6D-41A0A0C4DH26 115 aa18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 PATL2C9JE40 543 aaKnown RBP18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 DNM1LO00429 736 aa18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 VWA5AO00534 786 aa18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 FCER1AP12319 257 aa18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 COPB2P35606 906 aa18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 TSHZ3Q63HK5 1081 aa18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 NCAPG2Q86XI2 1143 aa18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 REPS2Q8NFH8 660 aa18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 MKNK2Q9HBH9 465 aa18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 EPB41L4AQ9HCS5 686 aaPredicted RBP18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 NRBP1Q9UHY1 535 aa18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 ZNF214Q9UL59 606 aaPredicted RBP18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 DIS3Q9Y2L1 958 aaKnown RBP18.24■□□□□ 0.51
SPTBN4-213ENST00000598775 ZNFX1Q9P2E3 1918 aaKnown RBP18.23■□□□□ 0.51
SPTBN4-213ENST00000598775 SEPT4O43236 478 aa18.23■□□□□ 0.51
SPTBN4-213ENST00000598775 PLS1Q14651 629 aa18.23■□□□□ 0.51
SPTBN4-213ENST00000598775 LRRC26Q2I0M4 334 aa18.23■□□□□ 0.51
SPTBN4-213ENST00000598775 GPR153Q6NV75 609 aa18.23■□□□□ 0.51
SPTBN4-213ENST00000598775 MKL1Q969V6 931 aa18.23■□□□□ 0.51
SPTBN4-213ENST00000598775 MAML3Q96JK9 1138 aa18.23■□□□□ 0.51
SPTBN4-213ENST00000598775 FBXO28Q9NVF7 368 aa18.23■□□□□ 0.51
SPTBN4-213ENST00000598775 IFNL3Q8IZI9 196 aa18.22■□□□□ 0.51
SPTBN4-213ENST00000598775 ZMYND8Q9ULU4 1186 aaPredicted RBP18.22■□□□□ 0.51
SPTBN4-213ENST00000598775 SALL3Q9BXA9 1300 aa18.22■□□□□ 0.51
SPTBN4-213ENST00000598775 PLIN4Q96Q06 1357 aa18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 MINDY4BA8MYZ0 360 aa18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 F5H6K3 240 aa18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 M0R2C6 588 aa18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 ATP2A1O14983 1001 aa18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 CNGA1P29973 690 aa18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 STAT3P40763 770 aa18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 MAGEA10P43363 369 aaPredicted RBP18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 KLRC3Q07444 240 aa18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 LRIT3Q3SXY7 679 aa18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 FAM83BQ5T0W9 1011 aa18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 ARRDC4Q8NCT1 418 aa18.21■□□□□ 0.51
SPTBN4-213ENST00000598775 TDO2P48775 406 aa18.2■□□□□ 0.5
SPTBN4-213ENST00000598775 RRP1P56182 461 aaKnown RBP18.2■□□□□ 0.5
SPTBN4-213ENST00000598775 ZMYM1Q5SVZ6 1142 aa18.2■□□□□ 0.5
SPTBN4-213ENST00000598775 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.2■□□□□ 0.5
SPTBN4-213ENST00000598775 ZNF444Q8N0Y2 327 aaPredicted RBP18.2■□□□□ 0.5
SPTBN4-213ENST00000598775 MMP19Q99542 508 aa18.2■□□□□ 0.5
SPTBN4-213ENST00000598775 SLF1Q9BQI6 1058 aa18.2■□□□□ 0.5
SPTBN4-213ENST00000598775 NACAP1Q9BZK3 213 aa18.2■□□□□ 0.5
SPTBN4-213ENST00000598775 SENP6Q9GZR1 1112 aaPredicted RBP18.2■□□□□ 0.5
SPTBN4-213ENST00000598775 MTMR4Q9NYA4 1195 aa18.2■□□□□ 0.5
SPTBN4-213ENST00000598775 NDUFB10O96000 172 aa18.19■□□□□ 0.5
SPTBN4-213ENST00000598775 SYN1P17600 705 aa18.19■□□□□ 0.5
SPTBN4-213ENST00000598775 MX1P20591 662 aa18.19■□□□□ 0.5
SPTBN4-213ENST00000598775 ZNF792Q3KQV3 632 aa18.19■□□□□ 0.5
SPTBN4-213ENST00000598775 TICAM2Q86XR7 235 aa18.19■□□□□ 0.5
SPTBN4-213ENST00000598775 TDHQ8IZJ6 230 aa18.19■□□□□ 0.5
SPTBN4-213ENST00000598775 MSL3Q8N5Y2 521 aaKnown RBP18.19■□□□□ 0.5
SPTBN4-213ENST00000598775 PRPF38AQ8NAV1 312 aaKnown RBP18.19■□□□□ 0.5
SPTBN4-213ENST00000598775 GMCL1P1Q8NEA9 526 aa18.19■□□□□ 0.5
SPTBN4-213ENST00000598775 TEX13BQ9BXU2 312 aa18.19■□□□□ 0.5
SPTBN4-213ENST00000598775 MYH4Q9Y623 1939 aa18.19■□□□□ 0.5
SPTBN4-213ENST00000598775 PLXNA1Q9UIW2 1896 aa18.18■□□□□ 0.5
SPTBN4-213ENST00000598775 SOX1O00570 391 aaPredicted RBP18.18■□□□□ 0.5
SPTBN4-213ENST00000598775 APPP05067 770 aa18.18■□□□□ 0.5
SPTBN4-213ENST00000598775 PDE4BQ07343 736 aa18.18■□□□□ 0.5
SPTBN4-213ENST00000598775 KCTD2Q14681 263 aa18.18■□□□□ 0.5
SPTBN4-213ENST00000598775 NEDD1Q8NHV4 660 aa18.18■□□□□ 0.5
SPTBN4-213ENST00000598775 OTUD7AQ8TE49 926 aaPredicted RBP18.18■□□□□ 0.5
SPTBN4-213ENST00000598775 CEP95Q96GE4 821 aa18.18■□□□□ 0.5
SPTBN4-213ENST00000598775 TINF2Q9BSI4 451 aa18.18■□□□□ 0.5
SPTBN4-213ENST00000598775 CLIP2Q9UDT6 1046 aa18.18■□□□□ 0.5
SPTBN4-213ENST00000598775 COL6A3P12111 3177 aa18.17■□□□□ 0.5
SPTBN4-213ENST00000598775 TTLL1O95922 423 aa18.17■□□□□ 0.5
SPTBN4-213ENST00000598775 SNX17Q15036 470 aa18.17■□□□□ 0.5
SPTBN4-213ENST00000598775 C1orf53Q5VUE5 145 aa18.17■□□□□ 0.5
SPTBN4-213ENST00000598775 SEC62Q99442 399 aaKnown RBP18.17■□□□□ 0.5
SPTBN4-213ENST00000598775 FSD1Q9BTV5 496 aa18.17■□□□□ 0.5
SPTBN4-213ENST00000598775 LAMA2P24043 3122 aaKnown RBP18.17■□□□□ 0.5
SPTBN4-213ENST00000598775 DNAJC25-GNG10A0A024R161 153 aa18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 KBTBD13C9JR72 458 aa18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 SLC3A2P08195 630 aaKnown RBP18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 FDX1P10109 184 aa18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 OAZ1P54368 228 aa18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 HDAC1Q13547 482 aaPredicted RBP18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 AAMPQ13685 434 aa18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 PPP4R3BQ5MIZ7 849 aa18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 SAMD1Q6SPF0 538 aaPredicted RBP18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 NUP88Q99567 741 aaPredicted RBP18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 SLC38A10Q9HBR0 1119 aa18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 FEM1BQ9UK73 627 aa18.16■□□□□ 0.5
SPTBN4-213ENST00000598775 SMCHD1A6NHR9 2005 aa18.15■□□□□ 0.5
SPTBN4-213ENST00000598775 RAD21O60216 631 aa18.15■□□□□ 0.5
SPTBN4-213ENST00000598775 PRDM1O75626 825 aa18.15■□□□□ 0.5
SPTBN4-213ENST00000598775 PPARAQ07869 468 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms