RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 DAGLBQ8NCG7 672 aa17.97■□□□□ 0.47
MBD1-227ENST00000592060 DHX58Q96C10 678 aa17.97■□□□□ 0.47
MBD1-227ENST00000592060 PCDHA4Q9UN74 947 aa17.97■□□□□ 0.47
MBD1-227ENST00000592060 PLIN4Q96Q06 1357 aa17.97■□□□□ 0.47
MBD1-227ENST00000592060 SLFN14P0C7P3 912 aa17.97■□□□□ 0.47
MBD1-227ENST00000592060 WWC2Q6AWC2 1192 aa17.97■□□□□ 0.47
MBD1-227ENST00000592060 TMC6Q7Z403 805 aa17.97■□□□□ 0.47
MBD1-227ENST00000592060 COL23A1Q86Y22 540 aaPredicted RBP17.97■□□□□ 0.47
MBD1-227ENST00000592060 MLKLQ8NB16 471 aa17.97■□□□□ 0.47
MBD1-227ENST00000592060 SUGT1Q9Y2Z0 365 aa17.97■□□□□ 0.47
MBD1-227ENST00000592060 NPR1P16066 1061 aa17.96■□□□□ 0.47
MBD1-227ENST00000592060 NLGN1Q8N2Q7 840 aa17.96■□□□□ 0.47
MBD1-227ENST00000592060 DPF2Q92785 391 aa17.96■□□□□ 0.47
MBD1-227ENST00000592060 LZTS2Q9BRK4 669 aa17.96■□□□□ 0.47
MBD1-227ENST00000592060 STX8Q9UNK0 236 aa17.96■□□□□ 0.47
MBD1-227ENST00000592060 STXBP3O00186 592 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 SKILP12757 684 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 IL17AQ16552 155 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 RASGRP2Q7LDG7 609 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 FAM177A1Q8N128 213 aaPredicted RBP17.95■□□□□ 0.46
MBD1-227ENST00000592060 CERS5Q8N5B7 392 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 C4orf32Q8N8J7 132 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 CCDC150Q8NCX0 1101 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 UPF1Q92900 1129 aaKnown RBP eCLIP17.95■□□□□ 0.466e-6■■□□□ 13.9
MBD1-227ENST00000592060 SPZ1Q9BXG8 430 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 FANCLQ9NW38 375 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 VWA3AA6NCI4 1184 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 DYNC1I1O14576 645 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 RIMBP2O15034 1052 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 PLSCR1O15162 318 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 FMR1Q06787 632 aaKnown RBP eCLIP17.95■□□□□ 0.46
MBD1-227ENST00000592060 ARMCX5Q6P1M9 558 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 CCDC148Q8NFR7 591 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 PAGE5Q96GU1 130 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 BARHL2Q9NY43 387 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 DACH1Q9UI36 760 aa17.95■□□□□ 0.46
MBD1-227ENST00000592060 ZNF646O15015 1829 aaPredicted RBP17.95■□□□□ 0.46
MBD1-227ENST00000592060 CBFA2T2O43439 604 aa17.94■□□□□ 0.46
MBD1-227ENST00000592060 MCM7P33993 719 aa17.94■□□□□ 0.46
MBD1-227ENST00000592060 GTF2F1P35269 517 aaKnown RBP eCLIP17.94■□□□□ 0.46
MBD1-227ENST00000592060 E2F4Q16254 413 aa17.94■□□□□ 0.46
MBD1-227ENST00000592060 GALNT17Q6IS24 598 aa17.94■□□□□ 0.46
MBD1-227ENST00000592060 ENOX1Q8TC92 643 aaKnown RBP17.94■□□□□ 0.46
MBD1-227ENST00000592060 KCND1Q9NSA2 647 aa17.94■□□□□ 0.46
MBD1-227ENST00000592060 GABPAQ06546 454 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 DPYDQ12882 1025 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 ARL6IP4Q66PJ3 421 aaKnown RBP17.93■□□□□ 0.46
MBD1-227ENST00000592060 RASGRP4Q8TDF6 673 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 CEP95Q96GE4 821 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 CCDC34Q96HJ3 373 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 MED15Q96RN5 788 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 PCDHA6Q9UN73 950 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 PCDHA8Q9Y5H6 950 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 GREB1LQ9C091 1923 aaPredicted RBP17.93■□□□□ 0.46
MBD1-227ENST00000592060 C10orf71Q711Q0 1435 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 KLRF2D3W0D1 207 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 TOP1P11387 765 aaKnown RBP17.93■□□□□ 0.46
MBD1-227ENST00000592060 ZNF18P17022 549 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 UBASH3AP57075 661 aa17.93■□□□□ 0.46
MBD1-227ENST00000592060 DHX8Q14562 1220 aaKnown RBP17.93■□□□□ 0.46
MBD1-227ENST00000592060 TNS1Q9HBL0 1735 aaKnown RBP17.93■□□□□ 0.46
MBD1-227ENST00000592060 GOLGA8HP0CJ92 632 aa17.92■□□□□ 0.46
MBD1-227ENST00000592060 AFMP43652 599 aa17.92■□□□□ 0.46
MBD1-227ENST00000592060 HEATR3Q7Z4Q2 680 aa17.92■□□□□ 0.46
MBD1-227ENST00000592060 C16orf45Q96MC5 204 aaPredicted RBP17.92■□□□□ 0.46
MBD1-227ENST00000592060 INTS13Q9NVM9 706 aa17.92■□□□□ 0.46
MBD1-227ENST00000592060 MTMR7Q9Y216 660 aa17.92■□□□□ 0.46
MBD1-227ENST00000592060 USP27XA6NNY8 438 aa17.91■□□□□ 0.46
MBD1-227ENST00000592060 SERPINC1P01008 464 aa17.91■□□□□ 0.46
MBD1-227ENST00000592060 PARP1P09874 1014 aaKnown RBP17.91■□□□□ 0.46
MBD1-227ENST00000592060 CT47A1Q5JQC4 288 aaPredicted RBP17.91■□□□□ 0.46
MBD1-227ENST00000592060 PDXDC2PQ6P474 469 aa17.91■□□□□ 0.46
MBD1-227ENST00000592060 ZC3H12CQ9C0D7 883 aaKnown RBP17.91■□□□□ 0.46
MBD1-227ENST00000592060 DDX4Q9NQI0 724 aaKnown RBP17.91■□□□□ 0.46
MBD1-227ENST00000592060 RGPD3A6NKT7 1758 aaPredicted RBP17.91■□□□□ 0.46
MBD1-227ENST00000592060 RGPD4Q7Z3J3 1758 aa17.91■□□□□ 0.46
MBD1-227ENST00000592060 SRCAPQ6ZRS2 3230 aa17.91■□□□□ 0.46
MBD1-227ENST00000592060 CCDC194A0A1B0GVG4 234 aa17.91■□□□□ 0.46
MBD1-227ENST00000592060 SMARCA1P28370 1054 aa17.91■□□□□ 0.46
MBD1-227ENST00000592060 ERCC5P28715 1186 aaPredicted RBP17.91■□□□□ 0.46
MBD1-227ENST00000592060 ALDH1B1P30837 517 aa17.91■□□□□ 0.46
MBD1-227ENST00000592060 LONP1P36776 959 aaKnown RBP17.91■□□□□ 0.46
MBD1-227ENST00000592060 DPP8Q6V1X1 898 aaPredicted RBP17.91■□□□□ 0.46
MBD1-227ENST00000592060 VSTM4Q8IW00 320 aa17.91■□□□□ 0.46
MBD1-227ENST00000592060 TRMT44Q8IYL2 757 aaKnown RBP17.91■□□□□ 0.46
MBD1-227ENST00000592060 CPVLQ9H3G5 476 aa17.91■□□□□ 0.46
MBD1-227ENST00000592060 NFE2L3Q9Y4A8 694 aa17.91■□□□□ 0.46
MBD1-227ENST00000592060 IGKV6D-41A0A0C4DH26 115 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 TMEM232C9JQI7 657 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 CASP1P29466 404 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 PDE6BP35913 854 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 TPD52L1Q16890 204 aaPredicted RBP17.9■□□□□ 0.46
MBD1-227ENST00000592060 CFAP100Q494V2 611 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 GSDMAQ96QA5 445 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 PYM1Q9BRP8 204 aaKnown RBP17.9■□□□□ 0.46
MBD1-227ENST00000592060 ZMYND12Q9H0C1 365 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 SIPA1L1O43166 1804 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 F8W031 263 aaPredicted RBP17.9■□□□□ 0.46
MBD1-227ENST00000592060 MMP10P09238 476 aa17.9■□□□□ 0.46
MBD1-227ENST00000592060 SFPQP23246 707 aaKnown RBP eCLIP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms