RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 XRCC4Q13426 336 aa11.41□□□□□ -0.58
CDH8-211ENST00000584337 CFAP221Q4G0U5 840 aa11.41□□□□□ -0.58
CDH8-211ENST00000584337 TLDC1Q6P9B6 456 aa11.41□□□□□ -0.58
CDH8-211ENST00000584337 UBE3BQ7Z3V4 1068 aa11.41□□□□□ -0.58
CDH8-211ENST00000584337 DDX27Q96GQ7 796 aaKnown RBP11.41□□□□□ -0.58
CDH8-211ENST00000584337 PA2G4Q9UQ80 394 aaKnown RBP11.41□□□□□ -0.58
CDH8-211ENST00000584337 CEP152O94986 1710 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 A0A0U1RQJ8 604 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 CCT8L1PA6NM43 557 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 CTNND1O60716 968 aaKnown RBP11.4□□□□□ -0.58
CDH8-211ENST00000584337 TAF5LO75529 589 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 ALDH1L1O75891 902 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 DNAJC8O75937 253 aaPredicted RBP11.4□□□□□ -0.58
CDH8-211ENST00000584337 CNGA1P29973 690 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 TNNC1P63316 161 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 RRAGBQ5VZM2 374 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 FGD4Q96M96 766 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 ABHD10Q9NUJ1 306 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 MAST1Q9Y2H9 1570 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 LIN7AO14910 233 aaPredicted RBP11.4□□□□□ -0.58
CDH8-211ENST00000584337 HEXIM1O94992 359 aaKnown RBP11.4□□□□□ -0.58
CDH8-211ENST00000584337 MAGEA8P43361 318 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 USP4Q13107 963 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 MUM1Q2TAK8 710 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 CDCA2Q69YH5 1023 aaPredicted RBP11.4□□□□□ -0.58
CDH8-211ENST00000584337 KIAA0825Q8IV33 1275 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 ZNF274Q96GC6 653 aaPredicted RBP11.4□□□□□ -0.58
CDH8-211ENST00000584337 GORASP1Q9BQQ3 440 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 KDM4CQ9H3R0 1056 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 INTS13Q9NVM9 706 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 SERTAD1Q9UHV2 236 aa11.4□□□□□ -0.58
CDH8-211ENST00000584337 SMNDC1O75940 238 aaKnown RBP eCLIP11.4□□□□□ -0.59
CDH8-211ENST00000584337 GHRP10912 638 aa11.4□□□□□ -0.59
CDH8-211ENST00000584337 CCDC178Q5BJE1 867 aa11.4□□□□□ -0.59
CDH8-211ENST00000584337 NME9Q86XW9 330 aa11.4□□□□□ -0.59
CDH8-211ENST00000584337 TRIM42Q8IWZ5 723 aa11.4□□□□□ -0.59
CDH8-211ENST00000584337 NUP58Q9BVL2 599 aa11.4□□□□□ -0.59
CDH8-211ENST00000584337 PLAAQ9Y263 795 aa11.4□□□□□ -0.59
CDH8-211ENST00000584337 ZMYM6O95789 1325 aa11.4□□□□□ -0.59
CDH8-211ENST00000584337 ZNF185O15231 689 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 SH3BGRP55822 239 aaPredicted RBP11.39□□□□□ -0.59
CDH8-211ENST00000584337 CCDC155Q8N6L0 562 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 WHAMMQ8TF30 809 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 RAPGEF4Q8WZA2 1011 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 TMEM165Q9HC07 324 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 PPP6R2O75170 966 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 PDE4BQ07343 736 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 MTA1Q13330 715 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 TRIM10Q9UDY6 481 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 RPS6KL1Q9Y6S9 549 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 NRXN1Q9ULB1 1477 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 MGRN1O60291 552 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 PDIA3P30101 505 aaKnown RBP11.39□□□□□ -0.59
CDH8-211ENST00000584337 ALDH3A1P30838 453 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 FXR1P51114 621 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDH8-211ENST00000584337 TTF1Q15361 905 aaPredicted RBP11.39□□□□□ -0.59
CDH8-211ENST00000584337 SLC9C2Q5TAH2 1124 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 GBP7Q8N8V2 638 aaPredicted RBP11.39□□□□□ -0.59
CDH8-211ENST00000584337 SPATA4Q8NEY3 305 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 NAF1Q96HR8 494 aaKnown RBP11.39□□□□□ -0.59
CDH8-211ENST00000584337 DMGDHQ9UI17 866 aaKnown RBP11.39□□□□□ -0.59
CDH8-211ENST00000584337 MYOM1P52179 1685 aa11.39□□□□□ -0.59
CDH8-211ENST00000584337 TLDC2A0PJX2 215 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 SRRM3A6NNA2 597 aaPredicted RBP11.38□□□□□ -0.59
CDH8-211ENST00000584337 FMR1Q06787 632 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDH8-211ENST00000584337 NEXNQ0ZGT2 675 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 BIRC3Q13489 604 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 MTMR3Q13615 1198 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 BEND3Q5T5X7 828 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 TTLL7Q6ZT98 887 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 MMGT1Q8N4V1 131 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 RAB3IPQ96QF0 476 aaPredicted RBP11.38□□□□□ -0.59
CDH8-211ENST00000584337 PAGR1Q9BTK6 254 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 MOV10L1Q9BXT6 1211 aaKnown RBP11.38□□□□□ -0.59
CDH8-211ENST00000584337 TAF1DQ9H5J8 278 aaPredicted RBP11.38□□□□□ -0.59
CDH8-211ENST00000584337 NOVA2Q9UNW9 492 aaKnown RBP11.38□□□□□ -0.59
CDH8-211ENST00000584337 KDRP35968 1356 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 ASXL2Q76L83 1435 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 ARHGEF5Q12774 1597 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 DNM1LO00429 736 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 ECEL1O95672 775 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 IMPDH2P12268 514 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 PPP2R2AP63151 447 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 KLC1Q07866 573 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 BLMHQ13867 455 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 ZNF589Q86UQ0 364 aaPredicted RBP11.38□□□□□ -0.59
CDH8-211ENST00000584337 EPAS1Q99814 870 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 CTNND2Q9UQB3 1225 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 PAPD7Q5XG87 772 aaKnown RBP11.38□□□□□ -0.59
CDH8-211ENST00000584337 CHMP6Q96FZ7 201 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 CNOT10Q9H9A5 744 aaKnown RBP11.38□□□□□ -0.59
CDH8-211ENST00000584337 LEMD3Q9Y2U8 911 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 MYO5CQ9NQX4 1742 aa11.38□□□□□ -0.59
CDH8-211ENST00000584337 PHF20L1A8MW92 1017 aa11.37□□□□□ -0.59
CDH8-211ENST00000584337 A1BGP04217 495 aa11.37□□□□□ -0.59
CDH8-211ENST00000584337 INHBEP58166 350 aa11.37□□□□□ -0.59
CDH8-211ENST00000584337 NLRP5P59047 1200 aa11.37□□□□□ -0.59
CDH8-211ENST00000584337 AMPD2Q01433 879 aa11.37□□□□□ -0.59
CDH8-211ENST00000584337 WASHC4Q2M389 1173 aa11.37□□□□□ -0.59
CDH8-211ENST00000584337 METTL16Q86W50 562 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms