RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 SNAP25P60880 206 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 MDM2Q00987 491 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-215ENST00000575112 EARS2Q5JPH6 523 aaKnown RBP9.62□□□□□ -0.87
RPAIN-215ENST00000575112 USP17L2Q6R6M4 530 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 FAM196AQ6ZSG2 479 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 GJA10Q969M2 543 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 TRIM47Q96LD4 638 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 MMRN2Q9H8L6 949 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 BIN2Q9UBW5 565 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-215ENST00000575112 MINPP1Q9UNW1 487 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 SCAF8Q9UPN6 1271 aaKnown RBP9.62□□□□□ -0.87
RPAIN-215ENST00000575112 CUTAO60888 179 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 CSF1RP07333 972 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 FXR1P51114 621 aaKnown RBP eCLIP9.62□□□□□ -0.87
RPAIN-215ENST00000575112 RNASE9P60153 205 aaKnown RBP9.62□□□□□ -0.87
RPAIN-215ENST00000575112 DPYDQ12882 1025 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 SPTY2D1Q68D10 685 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-215ENST00000575112 SLC35F6Q8N357 371 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 TXLNBQ8N3L3 684 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 STAG2Q8N3U4 1231 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 CRACR2BQ8N4Y2 399 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-215ENST00000575112 ENAHQ8N8S7 591 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-215ENST00000575112 IGSF22Q8N9C0 903 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 HPS3Q969F9 1004 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 MXD3Q9BW11 206 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 RASSF4Q9H2L5 321 aa9.62□□□□□ -0.87
RPAIN-215ENST00000575112 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.62□□□□□ -0.875e-6■■■■□ 23.1
RPAIN-215ENST00000575112 GTF2IP78347 998 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 SPECC1LQ69YQ0 1117 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 CCDC102AQ96A19 550 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 MAGEC2Q9UBF1 373 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-215ENST00000575112 CEP131Q9UPN4 1083 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 AFDNP55196 1824 aaKnown RBP9.61□□□□□ -0.87
RPAIN-215ENST00000575112 MAP2K7O14733 419 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 CASP14P31944 242 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 NOP2P46087 812 aaKnown RBP9.61□□□□□ -0.87
RPAIN-215ENST00000575112 RESP18Q5W5W9 173 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 SLF1Q9BQI6 1058 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 FAM217BQ9NTX9 383 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-215ENST00000575112 PCNTO95613 3336 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 IPO7O95373 1038 aaKnown RBP9.61□□□□□ -0.87
RPAIN-215ENST00000575112 SLC16A2P36021 539 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 ASIC1P78348 528 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 CACNB1Q02641 598 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-215ENST00000575112 NFIXQ14938 502 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 ZYXQ15942 572 aaKnown RBP9.61□□□□□ -0.87
RPAIN-215ENST00000575112 E2F4Q16254 413 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 TTC19Q6DKK2 380 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-215ENST00000575112 TEX11Q8IYF3 940 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 GOLGA1Q92805 767 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 MRC1P22897 1456 aa9.61□□□□□ -0.87
RPAIN-215ENST00000575112 ZSCAN12O43309 604 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 MTIF2P46199 727 aaKnown RBP9.6□□□□□ -0.87
RPAIN-215ENST00000575112 UBXN1Q04323 297 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 RILPL1Q5EBL4 403 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 SHISA4Q96DD7 197 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 FAM84BQ96KN1 310 aaPredicted RBP9.6□□□□□ -0.87
RPAIN-215ENST00000575112 GDAQ9Y2T3 454 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 ADGRG1Q9Y653 693 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 RGPD5Q99666 1765 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 CPDO75976 1380 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 CCNT1O60563 726 aaKnown RBP9.6□□□□□ -0.87
RPAIN-215ENST00000575112 MMP1P03956 469 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 ZNF18P17022 549 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 ACTN2P35609 894 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 KCNJ6P48051 423 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 MUM1L1Q5H9M0 696 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 APTXQ7Z2E3 356 aaKnown RBP9.6□□□□□ -0.87
RPAIN-215ENST00000575112 KANSL2Q9H9L4 492 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 ANKRD13CQ8N6S4 541 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 CNBD1Q8NA66 436 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 PNMA1Q8ND90 353 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 RABGGTAQ92696 567 aa9.6□□□□□ -0.87
RPAIN-215ENST00000575112 SEC63Q9UGP8 760 aaKnown RBP9.6□□□□□ -0.87
RPAIN-215ENST00000575112 ARHGAP23Q9P227 1491 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 TRIM49BA6NDI0 452 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 TRAPPC3LQ5T215 181 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 INTS5Q6P9B9 1019 aaKnown RBP9.59□□□□□ -0.87
RPAIN-215ENST00000575112 KIAA1328Q86T90 577 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 SH3RF3Q8TEJ3 882 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-215ENST00000575112 DEF6Q9H4E7 631 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 PKD2L1Q9P0L9 805 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 L1RE1Q9UN81 338 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 MYO1BO43795 1136 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 MYBL2P10244 700 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 TECP42680 631 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 ERVK-24P63145 666 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 SLC20A2Q08357 652 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 PARP10Q53GL7 1025 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 ATL3Q6DD88 541 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 LRRC31Q6UY01 552 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 TMTC2Q8N394 836 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 COA7Q96BR5 231 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 NFAT5O94916 1531 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 LMO7Q8WWI1 1683 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 ADAMTS3O15072 1205 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 STX10O60499 249 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 FMNL1O95466 1100 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-215ENST00000575112 CASP8Q14790 479 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 NTRK3Q16288 839 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms