RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 NCAPG2Q86XI2 1143 aa15.42■□□□□ 0.06
ATP2A3-211ENST00000572176 FBXO28Q9NVF7 368 aa15.42■□□□□ 0.06
ATP2A3-211ENST00000572176 TTC41PQ6P2S7 1318 aa15.42■□□□□ 0.06
ATP2A3-211ENST00000572176 M0R2C6 588 aa15.41■□□□□ 0.06
ATP2A3-211ENST00000572176 SOX1O00570 391 aaPredicted RBP15.41■□□□□ 0.06
ATP2A3-211ENST00000572176 SYN1P17600 705 aa15.41■□□□□ 0.06
ATP2A3-211ENST00000572176 CNGA1P29973 690 aa15.41■□□□□ 0.06
ATP2A3-211ENST00000572176 MAGEA10P43363 369 aaPredicted RBP15.41■□□□□ 0.06
ATP2A3-211ENST00000572176 PI4K2BQ8TCG2 481 aa15.41■□□□□ 0.06
ATP2A3-211ENST00000572176 PPP1R9AQ9ULJ8 1098 aa15.41■□□□□ 0.06
ATP2A3-211ENST00000572176 PCDHB15Q9Y5E8 787 aa15.41■□□□□ 0.06
ATP2A3-211ENST00000572176 DNM1LO00429 736 aa15.4■□□□□ 0.06
ATP2A3-211ENST00000572176 SLC25A27O95847 323 aa15.4■□□□□ 0.06
ATP2A3-211ENST00000572176 GNAT2P19087 354 aa15.4■□□□□ 0.06
ATP2A3-211ENST00000572176 FAM83BQ5T0W9 1011 aa15.4■□□□□ 0.06
ATP2A3-211ENST00000572176 RIOX2Q8IUF8 465 aa15.4■□□□□ 0.06
ATP2A3-211ENST00000572176 REPS2Q8NFH8 660 aa15.4■□□□□ 0.06
ATP2A3-211ENST00000572176 SLC5A4Q9NY91 659 aa15.4■□□□□ 0.06
ATP2A3-211ENST00000572176 IGKV6D-41A0A0C4DH26 115 aa15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 MINDY4BA8MYZ0 360 aa15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 VWA5AO00534 786 aa15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 ERC2O15083 957 aa15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 FCER1AP12319 257 aa15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 SAMD1Q6SPF0 538 aaPredicted RBP15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 OTUD7AQ8TE49 926 aaPredicted RBP15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 MAML3Q96JK9 1138 aa15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 NYAP2Q9P242 653 aa15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 ZNF214Q9UL59 606 aaPredicted RBP15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 DNAH12Q6ZR08 3092 aa15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 ZNFX1Q9P2E3 1918 aaKnown RBP15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 MYH4Q9Y623 1939 aa15.39■□□□□ 0.05
ATP2A3-211ENST00000572176 PLIN4Q96Q06 1357 aa15.38■□□□□ 0.05
ATP2A3-211ENST00000572176 PLXNA1Q9UIW2 1896 aa15.38■□□□□ 0.05
ATP2A3-211ENST00000572176 SEPT4O43236 478 aa15.38■□□□□ 0.05
ATP2A3-211ENST00000572176 TDO2P48775 406 aa15.38■□□□□ 0.05
ATP2A3-211ENST00000572176 LRRFIP1Q32MZ4 808 aaKnown RBP15.38■□□□□ 0.05
ATP2A3-211ENST00000572176 STK11IPQ8N1F8 1099 aa15.38■□□□□ 0.05
ATP2A3-211ENST00000572176 LRCH3Q96II8 777 aa15.38■□□□□ 0.05
ATP2A3-211ENST00000572176 MKNK2Q9HBH9 465 aa15.38■□□□□ 0.05
ATP2A3-211ENST00000572176 SALL3Q9BXA9 1300 aa15.38■□□□□ 0.05
ATP2A3-211ENST00000572176 RAD21O60216 631 aa15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 NDUFB10O96000 172 aa15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 COPB2P35606 906 aa15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 STAT3P40763 770 aa15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 RRP1P56182 461 aaKnown RBP15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 IFNL3Q8IZI9 196 aa15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 TDHQ8IZJ6 230 aa15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 SEC62Q99442 399 aaKnown RBP15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 MMP19Q99542 508 aa15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 NUP88Q99567 741 aaPredicted RBP15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 SLF1Q9BQI6 1058 aa15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 SENP6Q9GZR1 1112 aaPredicted RBP15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 NRBP1Q9UHY1 535 aa15.37■□□□□ 0.05
ATP2A3-211ENST00000572176 PATL2C9JE40 543 aaKnown RBP15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 F5H6K3 240 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 PRDM1O75626 825 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 MX1P20591 662 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 KLRC3Q07444 240 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 KCTD2Q14681 263 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 ZNF792Q3KQV3 632 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 ZMYM1Q5SVZ6 1142 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 ANO1Q5XXA6 986 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 ARRDC4Q8NCT1 418 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 FSD1Q9BTV5 496 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 ZNF287Q9HBT7 754 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 SYNPO2Q9UMS6 1093 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 DIS3Q9Y2L1 958 aaKnown RBP15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 LTBP2Q14767 1821 aa15.36■□□□□ 0.05
ATP2A3-211ENST00000572176 APPP05067 770 aa15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 PGK2P07205 417 aa15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 ATN1P54259 1190 aaPredicted RBP15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 LRIT3Q3SXY7 679 aa15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 FAM47AQ5JRC9 791 aa15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 PRAMEF19Q5SWL8 479 aa15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 GJC2Q5T442 439 aaPredicted RBP15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 MKL1Q969V6 931 aa15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 CEP95Q96GE4 821 aa15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 TEX13BQ9BXU2 312 aa15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 NACAP1Q9BZK3 213 aa15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 UBE2OQ9C0C9 1292 aaKnown RBP15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 MTMR4Q9NYA4 1195 aa15.35■□□□□ 0.05
ATP2A3-211ENST00000572176 KBTBD13C9JR72 458 aa15.34■□□□□ 0.05
ATP2A3-211ENST00000572176 ATP2A1O14983 1001 aa15.34■□□□□ 0.05
ATP2A3-211ENST00000572176 RTP1P59025 263 aa15.34■□□□□ 0.05
ATP2A3-211ENST00000572176 SNX17Q15036 470 aa15.34■□□□□ 0.05
ATP2A3-211ENST00000572176 SNRNP48Q6IEG0 339 aaKnown RBP15.34■□□□□ 0.05
ATP2A3-211ENST00000572176 GPR153Q6NV75 609 aa15.34■□□□□ 0.05
ATP2A3-211ENST00000572176 ZNF444Q8N0Y2 327 aaPredicted RBP15.34■□□□□ 0.05
ATP2A3-211ENST00000572176 GMCL1P1Q8NEA9 526 aa15.34■□□□□ 0.05
ATP2A3-211ENST00000572176 TINF2Q9BSI4 451 aa15.34■□□□□ 0.05
ATP2A3-211ENST00000572176 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
ATP2A3-211ENST00000572176 FOXP2O15409 715 aa15.33■□□□□ 0.04
ATP2A3-211ENST00000572176 TTLL1O95922 423 aa15.33■□□□□ 0.04
ATP2A3-211ENST00000572176 MDM2Q00987 491 aaPredicted RBP15.33■□□□□ 0.04
ATP2A3-211ENST00000572176 PPARAQ07869 468 aa15.33■□□□□ 0.04
ATP2A3-211ENST00000572176 LRRC41Q15345 812 aa15.33■□□□□ 0.04
ATP2A3-211ENST00000572176 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.33■□□□□ 0.04
ATP2A3-211ENST00000572176 LRRC47Q8N1G4 583 aaKnown RBP15.33■□□□□ 0.04
ATP2A3-211ENST00000572176 PRPF38AQ8NAV1 312 aaKnown RBP15.33■□□□□ 0.04
ATP2A3-211ENST00000572176 NEDD1Q8NHV4 660 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms