RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 SOX1O00570 391 aaPredicted RBP15.71■□□□□ 0.11
SPG7-221ENST00000569720 ZFYP08048 801 aaPredicted RBP15.71■□□□□ 0.11
SPG7-221ENST00000569720 SBK1Q52WX2 424 aa15.71■□□□□ 0.11
SPG7-221ENST00000569720 TDHQ8IZJ6 230 aa15.71■□□□□ 0.11
SPG7-221ENST00000569720 TRPV1Q8NER1 839 aa15.71■□□□□ 0.11
SPG7-221ENST00000569720 APPBP2Q92624 585 aa15.71■□□□□ 0.11
SPG7-221ENST00000569720 LRCH3Q96II8 777 aa15.71■□□□□ 0.11
SPG7-221ENST00000569720 PLXNA1Q9UIW2 1896 aa15.71■□□□□ 0.11
SPG7-221ENST00000569720 MYH4Q9Y623 1939 aa15.7■□□□□ 0.1
SPG7-221ENST00000569720 MINDY4BA8MYZ0 360 aa15.7■□□□□ 0.1
SPG7-221ENST00000569720 KBTBD13C9JR72 458 aa15.7■□□□□ 0.1
SPG7-221ENST00000569720 RNF113AO15541 343 aaKnown RBP15.7■□□□□ 0.1
SPG7-221ENST00000569720 SEPT4O43236 478 aa15.7■□□□□ 0.1
SPG7-221ENST00000569720 COBLO75128 1261 aa15.7■□□□□ 0.1
SPG7-221ENST00000569720 IGHA2P01877 340 aa15.7■□□□□ 0.1
SPG7-221ENST00000569720 GNAT2P19087 354 aa15.7■□□□□ 0.1
SPG7-221ENST00000569720 COPB2P35606 906 aa15.7■□□□□ 0.1
SPG7-221ENST00000569720 TMEM132BQ14DG7 1078 aa15.7■□□□□ 0.1
SPG7-221ENST00000569720 ZNF287Q9HBT7 754 aa15.7■□□□□ 0.1
SPG7-221ENST00000569720 GSG1L2A8MUP6 293 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 STAT3P40763 770 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 KCTD2Q14681 263 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 LRIT3Q3SXY7 679 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 FAM83BQ5T0W9 1011 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 GPR153Q6NV75 609 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 RIOX2Q8IUF8 465 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 OSBP2Q969R2 916 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 MAML3Q96JK9 1138 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 MMP19Q99542 508 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 LBHD1Q9BQE6 289 aaPredicted RBP15.69■□□□□ 0.1
SPG7-221ENST00000569720 FBXO28Q9NVF7 368 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 PRKAG2Q9UGJ0 569 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 PPP1R9AQ9ULJ8 1098 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 ADAMTS5Q9UNA0 930 aa15.69■□□□□ 0.1
SPG7-221ENST00000569720 DNAH12Q6ZR08 3092 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 ROBO3Q96MS0 1386 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 VWA5AO00534 786 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 ERC2O15083 957 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 GPAA1O43292 621 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 APPP05067 770 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 TDO2P48775 406 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 ATN1P54259 1190 aaPredicted RBP15.68■□□□□ 0.1
SPG7-221ENST00000569720 GJC2Q5T442 439 aaPredicted RBP15.68■□□□□ 0.1
SPG7-221ENST00000569720 STK11IPQ8N1F8 1099 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 NYAP2Q9P242 653 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 NRBP1Q9UHY1 535 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 LAMA3Q16787 3333 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 TTC41PQ6P2S7 1318 aa15.68■□□□□ 0.1
SPG7-221ENST00000569720 SMCHD1A6NHR9 2005 aa15.67■□□□□ 0.1
SPG7-221ENST00000569720 MYCNP04198 464 aaPredicted RBP15.67■□□□□ 0.1
SPG7-221ENST00000569720 RASA1P20936 1047 aa15.67■□□□□ 0.1
SPG7-221ENST00000569720 MDM2Q00987 491 aaPredicted RBP15.67■□□□□ 0.1
SPG7-221ENST00000569720 ANO1Q5XXA6 986 aa15.67■□□□□ 0.1
SPG7-221ENST00000569720 TSHZ3Q63HK5 1081 aa15.67■□□□□ 0.1
SPG7-221ENST00000569720 ZNF444Q8N0Y2 327 aaPredicted RBP15.67■□□□□ 0.1
SPG7-221ENST00000569720 SLF1Q9BQI6 1058 aa15.67■□□□□ 0.1
SPG7-221ENST00000569720 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.67■□□□□ 0.1
SPG7-221ENST00000569720 CTDP1Q9Y5B0 961 aaPredicted RBP15.67■□□□□ 0.1
SPG7-221ENST00000569720 RTP1P59025 263 aa15.66■□□□□ 0.1
SPG7-221ENST00000569720 PRAMEF19Q5SWL8 479 aa15.66■□□□□ 0.1
SPG7-221ENST00000569720 NACAP1Q9BZK3 213 aa15.66■□□□□ 0.1
SPG7-221ENST00000569720 ZNF214Q9UL59 606 aaPredicted RBP15.66■□□□□ 0.1
SPG7-221ENST00000569720 ATP11BQ9Y2G3 1177 aa15.66■□□□□ 0.1
SPG7-221ENST00000569720 DIS3Q9Y2L1 958 aaKnown RBP15.66■□□□□ 0.1
SPG7-221ENST00000569720 PATL2C9JE40 543 aaKnown RBP15.65■□□□□ 0.1
SPG7-221ENST00000569720 F5H6K3 240 aa15.65■□□□□ 0.1
SPG7-221ENST00000569720 PGK2P07205 417 aa15.65■□□□□ 0.1
SPG7-221ENST00000569720 RARBP10826 455 aa15.65■□□□□ 0.1
SPG7-221ENST00000569720 KLRC3Q07444 240 aa15.65■□□□□ 0.1
SPG7-221ENST00000569720 SLC39A5Q6ZMH5 540 aa15.65■□□□□ 0.1
SPG7-221ENST00000569720 PRPF38AQ8NAV1 312 aaKnown RBP15.65■□□□□ 0.1
SPG7-221ENST00000569720 TINF2Q9BSI4 451 aa15.65■□□□□ 0.1
SPG7-221ENST00000569720 TEX13BQ9BXU2 312 aa15.65■□□□□ 0.1
SPG7-221ENST00000569720 EPB41L4AQ9HCS5 686 aaPredicted RBP15.65■□□□□ 0.1
SPG7-221ENST00000569720 CLIP2Q9UDT6 1046 aa15.65■□□□□ 0.1
SPG7-221ENST00000569720 ZBTB47Q9UFB7 747 aaPredicted RBP15.65■□□□□ 0.1
SPG7-221ENST00000569720 M0R2C6 588 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 ZBED4O75132 1171 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 SLC3A2P08195 630 aaKnown RBP15.64■□□□□ 0.09
SPG7-221ENST00000569720 PDE4BQ07343 736 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 LRRC41Q15345 812 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 ZNF792Q3KQV3 632 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 SNRNP48Q6IEG0 339 aaKnown RBP15.64■□□□□ 0.09
SPG7-221ENST00000569720 IFNL3Q8IZI9 196 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 DEFB123Q8N688 67 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 REPS2Q8NFH8 660 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 NUP88Q99567 741 aaPredicted RBP15.64■□□□□ 0.09
SPG7-221ENST00000569720 FSD1Q9BTV5 496 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 XPNPEP3Q9NQH7 507 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 SYNPO2Q9UMS6 1093 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 CNPY2Q9Y2B0 182 aa15.64■□□□□ 0.09
SPG7-221ENST00000569720 PRDM1O75626 825 aa15.63■□□□□ 0.09
SPG7-221ENST00000569720 TTLL1O95922 423 aa15.63■□□□□ 0.09
SPG7-221ENST00000569720 NDUFB10O96000 172 aa15.63■□□□□ 0.09
SPG7-221ENST00000569720 ADCYAP1R1P41586 468 aa15.63■□□□□ 0.09
SPG7-221ENST00000569720 FAM47AQ5JRC9 791 aa15.63■□□□□ 0.09
SPG7-221ENST00000569720 RNF180Q86T96 592 aa15.63■□□□□ 0.09
SPG7-221ENST00000569720 MKL1Q969V6 931 aa15.63■□□□□ 0.09
SPG7-221ENST00000569720 DDX11Q96FC9 970 aa15.63■□□□□ 0.09
SPG7-221ENST00000569720 NAPBQ9H115 298 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms