RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 PARP14Q460N5 1801 aa18.12■□□□□ 0.49
COMMD4-223ENST00000568301 USP17L12C9JPN9 530 aa18.11■□□□□ 0.49
COMMD4-223ENST00000568301 USP17L21D6R901 530 aa18.11■□□□□ 0.49
COMMD4-223ENST00000568301 COBLO75128 1261 aa18.11■□□□□ 0.49
COMMD4-223ENST00000568301 ICA1Q05084 483 aa18.11■□□□□ 0.49
COMMD4-223ENST00000568301 SLFNL1Q499Z3 407 aa18.11■□□□□ 0.49
COMMD4-223ENST00000568301 PRAMEF19Q5SWL8 479 aa18.11■□□□□ 0.49
COMMD4-223ENST00000568301 C9orf50Q5SZB4 431 aa18.11■□□□□ 0.49
COMMD4-223ENST00000568301 ZSCAN25Q6NSZ9 544 aa18.11■□□□□ 0.49
COMMD4-223ENST00000568301 KANSL2Q9H9L4 492 aa18.11■□□□□ 0.49
COMMD4-223ENST00000568301 PRDM5Q9NQX1 630 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-223ENST00000568301 WDR46O15213 610 aaKnown RBP18.1■□□□□ 0.49
COMMD4-223ENST00000568301 MYCNP04198 464 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-223ENST00000568301 PLS1Q14651 629 aa18.1■□□□□ 0.49
COMMD4-223ENST00000568301 C16orf86Q6ZW13 317 aa18.1■□□□□ 0.49
COMMD4-223ENST00000568301 SPICE1Q8N0Z3 855 aa18.1■□□□□ 0.49
COMMD4-223ENST00000568301 BADQ92934 168 aa18.1■□□□□ 0.49
COMMD4-223ENST00000568301 CDX2Q99626 313 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-223ENST00000568301 SEMA6BQ9H3T3 888 aa18.1■□□□□ 0.49
COMMD4-223ENST00000568301 ADAMTS5Q9UNA0 930 aa18.1■□□□□ 0.49
COMMD4-223ENST00000568301 CYP2D7A0A087X1C5 515 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 KBTBD13C9JR72 458 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 SEPT4O43236 478 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 SLC25A27O95847 323 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 FCER1AP12319 257 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 TRIM60Q495X7 471 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 SH3RF1Q7Z6J0 888 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 NCAPG2Q86XI2 1143 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 CLEC10AQ8IUN9 316 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 ATG4CQ96DT6 458 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 LRRCC1Q9C099 1032 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 SLC4A4Q9Y6R1 1079 aa18.09■□□□□ 0.49
COMMD4-223ENST00000568301 MUC3AQ02505 3323 aa18.08■□□□□ 0.49
COMMD4-223ENST00000568301 SMCHD1A6NHR9 2005 aa18.08■□□□□ 0.49
COMMD4-223ENST00000568301 COL11A1P12107 1806 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-223ENST00000568301 TRIM43BA6NCK2 446 aa18.08■□□□□ 0.48
COMMD4-223ENST00000568301 SMIM22K7EJ46 135 aa18.08■□□□□ 0.48
COMMD4-223ENST00000568301 EEF2P13639 858 aaKnown RBP18.08■□□□□ 0.48
COMMD4-223ENST00000568301 ADCYAP1R1P41586 468 aa18.08■□□□□ 0.48
COMMD4-223ENST00000568301 SNX17Q15036 470 aa18.08■□□□□ 0.48
COMMD4-223ENST00000568301 CTR9Q6PD62 1173 aa18.08■□□□□ 0.48
COMMD4-223ENST00000568301 FERMT2Q96AC1 680 aa18.08■□□□□ 0.48
COMMD4-223ENST00000568301 TRIM43Q96BQ3 446 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-223ENST00000568301 RCAN3Q9UKA8 241 aa18.08■□□□□ 0.48
COMMD4-223ENST00000568301 CHGBP05060 677 aa18.07■□□□□ 0.48
COMMD4-223ENST00000568301 TMEM132BQ14DG7 1078 aa18.07■□□□□ 0.48
COMMD4-223ENST00000568301 LRRC41Q15345 812 aa18.07■□□□□ 0.48
COMMD4-223ENST00000568301 MAML3Q96JK9 1138 aa18.07■□□□□ 0.48
COMMD4-223ENST00000568301 PUS7LQ9H0K6 701 aaKnown RBP18.07■□□□□ 0.48
COMMD4-223ENST00000568301 PDLIM7Q9NR12 457 aa18.07■□□□□ 0.48
COMMD4-223ENST00000568301 FAM47AQ5JRC9 791 aa18.06■□□□□ 0.48
COMMD4-223ENST00000568301 RIOX2Q8IUF8 465 aa18.06■□□□□ 0.48
COMMD4-223ENST00000568301 TTYH1Q9H313 450 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-223ENST00000568301 GOPCQ9HD26 462 aa18.06■□□□□ 0.48
COMMD4-223ENST00000568301 NRBP1Q9UHY1 535 aa18.06■□□□□ 0.48
COMMD4-223ENST00000568301 SBK1Q52WX2 424 aa18.05■□□□□ 0.48
COMMD4-223ENST00000568301 GIMAP6Q6P9H5 292 aa18.05■□□□□ 0.48
COMMD4-223ENST00000568301 MAFAQ8NHW3 353 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-223ENST00000568301 MYLIPQ8WY64 445 aa18.05■□□□□ 0.48
COMMD4-223ENST00000568301 STRBPQ96SI9 672 aaKnown RBP18.05■□□□□ 0.48
COMMD4-223ENST00000568301 ECHDC1Q9NTX5 307 aa18.05■□□□□ 0.48
COMMD4-223ENST00000568301 ARPP21Q9UBL0 812 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-223ENST00000568301 DIS3Q9Y2L1 958 aaKnown RBP18.05■□□□□ 0.48
COMMD4-223ENST00000568301 PLXNA1Q9UIW2 1896 aa18.04■□□□□ 0.48
COMMD4-223ENST00000568301 VWA5AO00534 786 aa18.04■□□□□ 0.48
COMMD4-223ENST00000568301 ITGB8P26012 769 aa18.04■□□□□ 0.48
COMMD4-223ENST00000568301 COPB2P35606 906 aa18.04■□□□□ 0.48
COMMD4-223ENST00000568301 STAT3P40763 770 aa18.04■□□□□ 0.48
COMMD4-223ENST00000568301 SMAD3P84022 425 aaKnown RBP18.04■□□□□ 0.48
COMMD4-223ENST00000568301 TLE2Q04725 743 aa18.04■□□□□ 0.48
COMMD4-223ENST00000568301 KCTD2Q14681 263 aa18.04■□□□□ 0.48
COMMD4-223ENST00000568301 C1orf53Q5VUE5 145 aa18.04■□□□□ 0.48
COMMD4-223ENST00000568301 SAMD1Q6SPF0 538 aaPredicted RBP18.04■□□□□ 0.48
COMMD4-223ENST00000568301 MMP19Q99542 508 aa18.04■□□□□ 0.48
COMMD4-223ENST00000568301 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.04■□□□□ 0.48
COMMD4-223ENST00000568301 FBXO28Q9NVF7 368 aa18.04■□□□□ 0.48
COMMD4-223ENST00000568301 PPP1R9AQ9ULJ8 1098 aa18.04■□□□□ 0.48
COMMD4-223ENST00000568301 SMARCA5O60264 1052 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-223ENST00000568301 ZNF214Q9UL59 606 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-223ENST00000568301 GREB1LQ9C091 1923 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-223ENST00000568301 GSG1L2A8MUP6 293 aa18.02■□□□□ 0.48
COMMD4-223ENST00000568301 ZNF792Q3KQV3 632 aa18.02■□□□□ 0.48
COMMD4-223ENST00000568301 FAM83BQ5T0W9 1011 aa18.02■□□□□ 0.48
COMMD4-223ENST00000568301 KBTBD3Q8NAB2 608 aa18.02■□□□□ 0.48
COMMD4-223ENST00000568301 REPS2Q8NFH8 660 aa18.02■□□□□ 0.48
COMMD4-223ENST00000568301 TINF2Q9BSI4 451 aa18.02■□□□□ 0.48
COMMD4-223ENST00000568301 XPNPEP3Q9NQH7 507 aa18.02■□□□□ 0.48
COMMD4-223ENST00000568301 NYAP2Q9P242 653 aa18.02■□□□□ 0.48
COMMD4-223ENST00000568301 PHF24Q9UPV7 400 aa18.02■□□□□ 0.48
COMMD4-223ENST00000568301 PGK1P00558 417 aa18.01■□□□□ 0.47
COMMD4-223ENST00000568301 PGK2P07205 417 aa18.01■□□□□ 0.47
COMMD4-223ENST00000568301 TAL1P17542 331 aaPredicted RBP18.01■□□□□ 0.47
COMMD4-223ENST00000568301 RASA1P20936 1047 aa18.01■□□□□ 0.47
COMMD4-223ENST00000568301 EPHB4P54760 987 aa18.01■□□□□ 0.47
COMMD4-223ENST00000568301 C20orf194Q5TEA3 1177 aa18.01■□□□□ 0.47
COMMD4-223ENST00000568301 DCTPP1Q9H773 170 aa18.01■□□□□ 0.47
COMMD4-223ENST00000568301 MKNK2Q9HBH9 465 aa18.01■□□□□ 0.47
COMMD4-223ENST00000568301 TACC3Q9Y6A5 838 aa18.01■□□□□ 0.47
COMMD4-223ENST00000568301 F5H6K3 240 aa18■□□□□ 0.47
COMMD4-223ENST00000568301 RAD21O60216 631 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms