RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 ADAMTS5Q9UNA0 930 aa23.63■■□□□ 1.37
PRKCH-219ENST00000555906 GPAA1O43292 621 aa23.62■■□□□ 1.37
PRKCH-219ENST00000555906 GNAT2P19087 354 aa23.62■■□□□ 1.37
PRKCH-219ENST00000555906 TMEM132BQ14DG7 1078 aa23.62■■□□□ 1.37
PRKCH-219ENST00000555906 EPB41L4AQ9HCS5 686 aaPredicted RBP23.62■■□□□ 1.37
PRKCH-219ENST00000555906 DNM1LO00429 736 aa23.61■■□□□ 1.37
PRKCH-219ENST00000555906 COBLO75128 1261 aa23.61■■□□□ 1.37
PRKCH-219ENST00000555906 SLC25A27O95847 323 aa23.61■■□□□ 1.37
PRKCH-219ENST00000555906 SYN1P17600 705 aa23.61■■□□□ 1.37
PRKCH-219ENST00000555906 RASA1P20936 1047 aa23.61■■□□□ 1.37
PRKCH-219ENST00000555906 CNGA1P29973 690 aa23.61■■□□□ 1.37
PRKCH-219ENST00000555906 LRRC26Q2I0M4 334 aa23.61■■□□□ 1.37
PRKCH-219ENST00000555906 LRRFIP1Q32MZ4 808 aaKnown RBP23.61■■□□□ 1.37
PRKCH-219ENST00000555906 PPP1R9AQ9ULJ8 1098 aa23.61■■□□□ 1.37
PRKCH-219ENST00000555906 FCER1AP12319 257 aa23.6■■□□□ 1.37
PRKCH-219ENST00000555906 MAGEA10P43363 369 aaPredicted RBP23.6■■□□□ 1.37
PRKCH-219ENST00000555906 MKNK2Q9HBH9 465 aa23.6■■□□□ 1.37
PRKCH-219ENST00000555906 FBXO28Q9NVF7 368 aa23.6■■□□□ 1.37
PRKCH-219ENST00000555906 LTBP2Q14767 1821 aa23.6■■□□□ 1.37
PRKCH-219ENST00000555906 M0R2C6 588 aa23.59■■□□□ 1.37
PRKCH-219ENST00000555906 ERC2O15083 957 aa23.59■■□□□ 1.37
PRKCH-219ENST00000555906 COPB2P35606 906 aa23.59■■□□□ 1.37
PRKCH-219ENST00000555906 TDO2P48775 406 aa23.59■■□□□ 1.37
PRKCH-219ENST00000555906 FAM83BQ5T0W9 1011 aa23.59■■□□□ 1.37
PRKCH-219ENST00000555906 SAMD1Q6SPF0 538 aaPredicted RBP23.59■■□□□ 1.37
PRKCH-219ENST00000555906 RIOX2Q8IUF8 465 aa23.59■■□□□ 1.37
PRKCH-219ENST00000555906 PI4K2BQ8TCG2 481 aa23.59■■□□□ 1.37
PRKCH-219ENST00000555906 MAML3Q96JK9 1138 aa23.59■■□□□ 1.37
PRKCH-219ENST00000555906 NYAP2Q9P242 653 aa23.59■■□□□ 1.37
PRKCH-219ENST00000555906 ZNF214Q9UL59 606 aaPredicted RBP23.59■■□□□ 1.37
PRKCH-219ENST00000555906 PCDHB15Q9Y5E8 787 aa23.59■■□□□ 1.37
PRKCH-219ENST00000555906 PLIN4Q96Q06 1357 aa23.58■■□□□ 1.37
PRKCH-219ENST00000555906 MINDY4BA8MYZ0 360 aa23.58■■□□□ 1.37
PRKCH-219ENST00000555906 VWA5AO00534 786 aa23.58■■□□□ 1.37
PRKCH-219ENST00000555906 SOX1O00570 391 aaPredicted RBP23.58■■□□□ 1.37
PRKCH-219ENST00000555906 REPS2Q8NFH8 660 aa23.58■■□□□ 1.37
PRKCH-219ENST00000555906 ZNF287Q9HBT7 754 aa23.58■■□□□ 1.37
PRKCH-219ENST00000555906 SEPT4O43236 478 aa23.57■■□□□ 1.36
PRKCH-219ENST00000555906 RAD21O60216 631 aa23.57■■□□□ 1.36
PRKCH-219ENST00000555906 MMP19Q99542 508 aa23.57■■□□□ 1.36
PRKCH-219ENST00000555906 IGKV6D-41A0A0C4DH26 115 aa23.56■■□□□ 1.36
PRKCH-219ENST00000555906 SLF1Q9BQI6 1058 aa23.56■■□□□ 1.36
PRKCH-219ENST00000555906 SENP6Q9GZR1 1112 aaPredicted RBP23.56■■□□□ 1.36
PRKCH-219ENST00000555906 NRBP1Q9UHY1 535 aa23.56■■□□□ 1.36
PRKCH-219ENST00000555906 SYNPO2Q9UMS6 1093 aa23.56■■□□□ 1.36
PRKCH-219ENST00000555906 NDUFB10O96000 172 aa23.55■■□□□ 1.36
PRKCH-219ENST00000555906 STAT3P40763 770 aa23.55■■□□□ 1.36
PRKCH-219ENST00000555906 RRP1P56182 461 aaKnown RBP23.55■■□□□ 1.36
PRKCH-219ENST00000555906 TDHQ8IZJ6 230 aa23.55■■□□□ 1.36
PRKCH-219ENST00000555906 STK11IPQ8N1F8 1099 aa23.55■■□□□ 1.36
PRKCH-219ENST00000555906 ARRDC4Q8NCT1 418 aa23.55■■□□□ 1.36
PRKCH-219ENST00000555906 FSD1Q9BTV5 496 aa23.55■■□□□ 1.36
PRKCH-219ENST00000555906 SMCHD1A6NHR9 2005 aa23.54■■□□□ 1.36
PRKCH-219ENST00000555906 APPP05067 770 aa23.54■■□□□ 1.36
PRKCH-219ENST00000555906 MX1P20591 662 aa23.54■■□□□ 1.36
PRKCH-219ENST00000555906 KCTD2Q14681 263 aa23.54■■□□□ 1.36
PRKCH-219ENST00000555906 IFNL3Q8IZI9 196 aa23.54■■□□□ 1.36
PRKCH-219ENST00000555906 OTUD7AQ8TE49 926 aaPredicted RBP23.54■■□□□ 1.36
PRKCH-219ENST00000555906 LRCH3Q96II8 777 aa23.54■■□□□ 1.36
PRKCH-219ENST00000555906 NUP88Q99567 741 aaPredicted RBP23.54■■□□□ 1.36
PRKCH-219ENST00000555906 NACAP1Q9BZK3 213 aa23.54■■□□□ 1.36
PRKCH-219ENST00000555906 DIS3Q9Y2L1 958 aaKnown RBP23.54■■□□□ 1.36
PRKCH-219ENST00000555906 PATL2C9JE40 543 aaKnown RBP23.53■■□□□ 1.36
PRKCH-219ENST00000555906 KBTBD13C9JR72 458 aa23.53■■□□□ 1.36
PRKCH-219ENST00000555906 F5H6K3 240 aa23.53■■□□□ 1.36
PRKCH-219ENST00000555906 KLRC3Q07444 240 aa23.53■■□□□ 1.36
PRKCH-219ENST00000555906 LRIT3Q3SXY7 679 aa23.53■■□□□ 1.36
PRKCH-219ENST00000555906 TEX13BQ9BXU2 312 aa23.53■■□□□ 1.36
PRKCH-219ENST00000555906 UBE2OQ9C0C9 1292 aaKnown RBP23.53■■□□□ 1.36
PRKCH-219ENST00000555906 SALL3Q9BXA9 1300 aa23.53■■□□□ 1.36
PRKCH-219ENST00000555906 ZMYM1Q5SVZ6 1142 aa23.52■■□□□ 1.36
PRKCH-219ENST00000555906 GJC2Q5T442 439 aaPredicted RBP23.52■■□□□ 1.36
PRKCH-219ENST00000555906 GPR153Q6NV75 609 aa23.52■■□□□ 1.36
PRKCH-219ENST00000555906 ZNF444Q8N0Y2 327 aaPredicted RBP23.52■■□□□ 1.36
PRKCH-219ENST00000555906 CEP95Q96GE4 821 aa23.52■■□□□ 1.36
PRKCH-219ENST00000555906 PRDM1O75626 825 aa23.51■■□□□ 1.35
PRKCH-219ENST00000555906 PGK2P07205 417 aa23.51■■□□□ 1.35
PRKCH-219ENST00000555906 ZNF792Q3KQV3 632 aa23.51■■□□□ 1.35
PRKCH-219ENST00000555906 ANO1Q5XXA6 986 aa23.51■■□□□ 1.35
PRKCH-219ENST00000555906 PRPF38AQ8NAV1 312 aaKnown RBP23.51■■□□□ 1.35
PRKCH-219ENST00000555906 MKL1Q969V6 931 aa23.51■■□□□ 1.35
PRKCH-219ENST00000555906 SEC62Q99442 399 aaKnown RBP23.51■■□□□ 1.35
PRKCH-219ENST00000555906 TINF2Q9BSI4 451 aa23.51■■□□□ 1.35
PRKCH-219ENST00000555906 NAPBQ9H115 298 aa23.51■■□□□ 1.35
PRKCH-219ENST00000555906 MTMR4Q9NYA4 1195 aa23.51■■□□□ 1.35
PRKCH-219ENST00000555906 CLIP2Q9UDT6 1046 aa23.51■■□□□ 1.35
PRKCH-219ENST00000555906 ATP2A1O14983 1001 aa23.5■■□□□ 1.35
PRKCH-219ENST00000555906 TTLL1O95922 423 aa23.5■■□□□ 1.35
PRKCH-219ENST00000555906 ATN1P54259 1190 aaPredicted RBP23.5■■□□□ 1.35
PRKCH-219ENST00000555906 RTP1P59025 263 aa23.5■■□□□ 1.35
PRKCH-219ENST00000555906 PDE4BQ07343 736 aa23.5■■□□□ 1.35
PRKCH-219ENST00000555906 FAM47AQ5JRC9 791 aa23.5■■□□□ 1.35
PRKCH-219ENST00000555906 PRAMEF19Q5SWL8 479 aa23.5■■□□□ 1.35
PRKCH-219ENST00000555906 SNRNP48Q6IEG0 339 aaKnown RBP23.5■■□□□ 1.35
PRKCH-219ENST00000555906 GMCL1P1Q8NEA9 526 aa23.5■■□□□ 1.35
PRKCH-219ENST00000555906 COL6A3P12111 3177 aa23.5■■□□□ 1.35
PRKCH-219ENST00000555906 SLC3A2P08195 630 aaKnown RBP23.49■■□□□ 1.35
PRKCH-219ENST00000555906 SNX17Q15036 470 aa23.49■■□□□ 1.35
PRKCH-219ENST00000555906 LRRC41Q15345 812 aa23.49■■□□□ 1.35
PRKCH-219ENST00000555906 NEDD1Q8NHV4 660 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms