RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 FAM109BQ6ICB4 259 aaPredicted RBP18.11■□□□□ 0.49
APEX1-204ENST00000553368 CHMP4BQ9H444 224 aaKnown RBP18.11■□□□□ 0.49
APEX1-204ENST00000553368 LTBP2Q14767 1821 aa18.11■□□□□ 0.49
APEX1-204ENST00000553368 MYH7P12883 1935 aa18.11■□□□□ 0.49
APEX1-204ENST00000553368 KBTBD13C9JR72 458 aa18.1■□□□□ 0.49
APEX1-204ENST00000553368 CTR9Q6PD62 1173 aa18.1■□□□□ 0.49
APEX1-204ENST00000553368 RIOX2Q8IUF8 465 aa18.1■□□□□ 0.49
APEX1-204ENST00000553368 AMOTL1Q8IY63 956 aa18.1■□□□□ 0.49
APEX1-204ENST00000553368 PUS7LQ9H0K6 701 aaKnown RBP18.1■□□□□ 0.49
APEX1-204ENST00000553368 KANSL2Q9H9L4 492 aa18.1■□□□□ 0.49
APEX1-204ENST00000553368 FBXO28Q9NVF7 368 aa18.1■□□□□ 0.49
APEX1-204ENST00000553368 NRBP1Q9UHY1 535 aa18.1■□□□□ 0.49
APEX1-204ENST00000553368 SLC4A4Q9Y6R1 1079 aa18.1■□□□□ 0.49
APEX1-204ENST00000553368 COL11A1P12107 1806 aaPredicted RBP18.09■□□□□ 0.49
APEX1-204ENST00000553368 LRRC41Q15345 812 aa18.09■□□□□ 0.49
APEX1-204ENST00000553368 C1orf53Q5VUE5 145 aa18.09■□□□□ 0.49
APEX1-204ENST00000553368 DIEXFQ68CQ4 756 aaKnown RBP18.09■□□□□ 0.49
APEX1-204ENST00000553368 ZSCAN25Q6NSZ9 544 aa18.09■□□□□ 0.49
APEX1-204ENST00000553368 REPS2Q8NFH8 660 aa18.09■□□□□ 0.49
APEX1-204ENST00000553368 DDRGK1Q96HY6 314 aa18.09■□□□□ 0.49
APEX1-204ENST00000553368 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.09■□□□□ 0.49
APEX1-204ENST00000553368 BCL11AQ9H165 835 aa18.09■□□□□ 0.49
APEX1-204ENST00000553368 PRKAG2Q9UGJ0 569 aa18.09■□□□□ 0.49
APEX1-204ENST00000553368 ATP11BQ9Y2G3 1177 aa18.09■□□□□ 0.49
APEX1-204ENST00000553368 DIS3Q9Y2L1 958 aaKnown RBP18.09■□□□□ 0.49
APEX1-204ENST00000553368 VWA5AO00534 786 aa18.08■□□□□ 0.48
APEX1-204ENST00000553368 ZNF792Q3KQV3 632 aa18.08■□□□□ 0.48
APEX1-204ENST00000553368 MMP19Q99542 508 aa18.08■□□□□ 0.48
APEX1-204ENST00000553368 LRRCC1Q9C099 1032 aa18.08■□□□□ 0.48
APEX1-204ENST00000553368 ZNF214Q9UL59 606 aaPredicted RBP18.08■□□□□ 0.48
APEX1-204ENST00000553368 PPP1R9AQ9ULJ8 1098 aa18.08■□□□□ 0.48
APEX1-204ENST00000553368 SMCHD1A6NHR9 2005 aa18.08■□□□□ 0.48
APEX1-204ENST00000553368 GREB1LQ9C091 1923 aaPredicted RBP18.08■□□□□ 0.48
APEX1-204ENST00000553368 STAT3P40763 770 aa18.07■□□□□ 0.48
APEX1-204ENST00000553368 ADCYAP1R1P41586 468 aa18.07■□□□□ 0.48
APEX1-204ENST00000553368 SBK1Q52WX2 424 aa18.07■□□□□ 0.48
APEX1-204ENST00000553368 FAM47AQ5JRC9 791 aa18.07■□□□□ 0.48
APEX1-204ENST00000553368 STRBPQ96SI9 672 aaKnown RBP18.07■□□□□ 0.48
APEX1-204ENST00000553368 GOPCQ9HD26 462 aa18.07■□□□□ 0.48
APEX1-204ENST00000553368 ARPP21Q9UBL0 812 aaPredicted RBP18.07■□□□□ 0.48
APEX1-204ENST00000553368 A0A0C4DFX4 3053 aa18.06■□□□□ 0.48
APEX1-204ENST00000553368 COPB2P35606 906 aa18.06■□□□□ 0.48
APEX1-204ENST00000553368 TRIM60Q495X7 471 aa18.06■□□□□ 0.48
APEX1-204ENST00000553368 SAMD1Q6SPF0 538 aaPredicted RBP18.06■□□□□ 0.48
APEX1-204ENST00000553368 GUCD1Q96NT3 240 aa18.06■□□□□ 0.48
APEX1-204ENST00000553368 TINF2Q9BSI4 451 aa18.06■□□□□ 0.48
APEX1-204ENST00000553368 PDLIM7Q9NR12 457 aa18.06■□□□□ 0.48
APEX1-204ENST00000553368 PHF24Q9UPV7 400 aa18.06■□□□□ 0.48
APEX1-204ENST00000553368 ROBO3Q96MS0 1386 aa18.05■□□□□ 0.48
APEX1-204ENST00000553368 PLXNA1Q9UIW2 1896 aa18.05■□□□□ 0.48
APEX1-204ENST00000553368 GSG1L2A8MUP6 293 aa18.05■□□□□ 0.48
APEX1-204ENST00000553368 PGK2P07205 417 aa18.05■□□□□ 0.48
APEX1-204ENST00000553368 KCTD2Q14681 263 aa18.05■□□□□ 0.48
APEX1-204ENST00000553368 SHHQ15465 462 aa18.05■□□□□ 0.48
APEX1-204ENST00000553368 FAM83BQ5T0W9 1011 aa18.05■□□□□ 0.48
APEX1-204ENST00000553368 GIMAP6Q6P9H5 292 aa18.05■□□□□ 0.48
APEX1-204ENST00000553368 TRIM43BA6NCK2 446 aa18.04■□□□□ 0.48
APEX1-204ENST00000553368 SMARCA5O60264 1052 aaPredicted RBP18.04■□□□□ 0.48
APEX1-204ENST00000553368 ZNF865P0CJ78 1059 aaPredicted RBP18.04■□□□□ 0.48
APEX1-204ENST00000553368 RARBP10826 455 aa18.04■□□□□ 0.48
APEX1-204ENST00000553368 RASA1P20936 1047 aa18.04■□□□□ 0.48
APEX1-204ENST00000553368 SH3RF1Q7Z6J0 888 aa18.04■□□□□ 0.48
APEX1-204ENST00000553368 BADQ92934 168 aa18.04■□□□□ 0.48
APEX1-204ENST00000553368 FERMT2Q96AC1 680 aa18.04■□□□□ 0.48
APEX1-204ENST00000553368 TRIM43Q96BQ3 446 aaPredicted RBP18.04■□□□□ 0.48
APEX1-204ENST00000553368 XPNPEP3Q9NQH7 507 aa18.04■□□□□ 0.48
APEX1-204ENST00000553368 ECHDC1Q9NTX5 307 aa18.04■□□□□ 0.48
APEX1-204ENST00000553368 NYAP2Q9P242 653 aa18.04■□□□□ 0.48
APEX1-204ENST00000553368 RCAN3Q9UKA8 241 aa18.04■□□□□ 0.48
APEX1-204ENST00000553368 LAMA2P24043 3122 aaKnown RBP18.04■□□□□ 0.48
APEX1-204ENST00000553368 MYCNP04198 464 aaPredicted RBP18.03■□□□□ 0.48
APEX1-204ENST00000553368 TAL1P17542 331 aaPredicted RBP18.03■□□□□ 0.48
APEX1-204ENST00000553368 C9orf50Q5SZB4 431 aa18.03■□□□□ 0.48
APEX1-204ENST00000553368 RNF180Q86T96 592 aa18.03■□□□□ 0.48
APEX1-204ENST00000553368 KBTBD3Q8NAB2 608 aa18.03■□□□□ 0.48
APEX1-204ENST00000553368 OSBP2Q969R2 916 aa18.03■□□□□ 0.48
APEX1-204ENST00000553368 PRDM5Q9NQX1 630 aaPredicted RBP18.03■□□□□ 0.48
APEX1-204ENST00000553368 IGKV6D-41A0A0C4DH26 115 aa18.02■□□□□ 0.48
APEX1-204ENST00000553368 F5H6K3 240 aa18.02■□□□□ 0.48
APEX1-204ENST00000553368 TLE2Q04725 743 aa18.02■□□□□ 0.48
APEX1-204ENST00000553368 KLRC3Q07444 240 aa18.02■□□□□ 0.48
APEX1-204ENST00000553368 C20orf194Q5TEA3 1177 aa18.02■□□□□ 0.48
APEX1-204ENST00000553368 MSL3Q8N5Y2 521 aaKnown RBP18.02■□□□□ 0.48
APEX1-204ENST00000553368 APPBP2Q92624 585 aa18.02■□□□□ 0.48
APEX1-204ENST00000553368 SLF1Q9BQI6 1058 aa18.02■□□□□ 0.48
APEX1-204ENST00000553368 TEX13BQ9BXU2 312 aa18.02■□□□□ 0.48
APEX1-204ENST00000553368 DNAJC25-GNG10A0A024R161 153 aa18.01■□□□□ 0.47
APEX1-204ENST00000553368 ATP2A1O14983 1001 aa18.01■□□□□ 0.47
APEX1-204ENST00000553368 ADAMTS4O75173 837 aa18.01■□□□□ 0.47
APEX1-204ENST00000553368 PGK1P00558 417 aa18.01■□□□□ 0.47
APEX1-204ENST00000553368 AKR1A1P14550 325 aa18.01■□□□□ 0.47
APEX1-204ENST00000553368 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.01■□□□□ 0.47
APEX1-204ENST00000553368 NUP88Q99567 741 aaPredicted RBP18.01■□□□□ 0.47
APEX1-204ENST00000553368 MKNK2Q9HBH9 465 aa18.01■□□□□ 0.47
APEX1-204ENST00000553368 RIPK3Q9Y572 518 aa18.01■□□□□ 0.47
APEX1-204ENST00000553368 TACC3Q9Y6A5 838 aa18.01■□□□□ 0.47
APEX1-204ENST00000553368 RAD21O60216 631 aa18■□□□□ 0.47
APEX1-204ENST00000553368 NDUFB10O96000 172 aa18■□□□□ 0.47
APEX1-204ENST00000553368 ITGB8P26012 769 aa18■□□□□ 0.47
APEX1-204ENST00000553368 SMAD3P84022 425 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms