RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 SRBD1Q8N5C6 995 aaKnown RBP13.05□□□□□ -0.32
CACNB3-224ENST00000552812 AIFM3Q96NN9 605 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 SCAND2PQ9GZW5 306 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-224ENST00000552812 KANSL2Q9H9L4 492 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 CNPY2Q9Y2B0 182 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 SHTN1A0MZ66 631 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 PALM3A6NDB9 673 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-224ENST00000552812 MPHOSPH10O00566 681 aaKnown RBP13.05□□□□□ -0.32
CACNB3-224ENST00000552812 NCLP19338 710 aaKnown RBP13.05□□□□□ -0.32
CACNB3-224ENST00000552812 SMARCA1P28370 1054 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 KLHL40Q2TBA0 621 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 CFAP45Q9UL16 551 aa13.05□□□□□ -0.32
CACNB3-224ENST00000552812 ELP1O95163 1332 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 FAM196BA6NMK8 535 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 H7C1D1 291 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 MBD3O95983 291 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 PARP1P09874 1014 aaKnown RBP13.04□□□□□ -0.32
CACNB3-224ENST00000552812 SNHG28P0DPA3 235 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 GUCY1A2P33402 732 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 KIF23Q02241 960 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-224ENST00000552812 PKN1Q16512 942 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 ABCB5Q2M3G0 1257 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 KIF4BQ2VIQ3 1234 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 OTUD7BQ6GQQ9 843 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 USP48Q86UV5 1035 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.04□□□□□ -0.32
CACNB3-224ENST00000552812 GPRC5DQ9NZD1 345 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 NYAP2Q9P242 653 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 SYNPO2Q9UMS6 1093 aa13.04□□□□□ -0.32
CACNB3-224ENST00000552812 DDX49Q9Y6V7 483 aaKnown RBP13.04□□□□□ -0.32
CACNB3-224ENST00000552812 V9GY48 417 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-224ENST00000552812 FIBPO43427 364 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 MMP1P03956 469 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 PDHBP11177 359 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 YBX3P16989 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
CACNB3-224ENST00000552812 MAP3K10Q02779 954 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 SAFBQ15424 915 aaKnown RBP eCLIP13.03□□□□□ -0.32
CACNB3-224ENST00000552812 ASPRV1Q53RT3 343 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 RBM26Q5T8P6 1007 aaKnown RBP13.03□□□□□ -0.32
CACNB3-224ENST00000552812 FAM173BQ6P4H8 233 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 SAMD7Q7Z3H4 446 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 MKL1Q969V6 931 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 ZNF396Q96N95 335 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-224ENST00000552812 SPZ1Q9BXG8 430 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 TMEM39BQ9GZU3 492 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 GDPD2Q9HCC8 539 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 GJB4Q9NTQ9 266 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 PGAP2Q9UHJ9 254 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 MYH4Q9Y623 1939 aa13.03□□□□□ -0.32
CACNB3-224ENST00000552812 UBE2Q2LH0YL09 131 aa13.02□□□□□ -0.32
CACNB3-224ENST00000552812 EGFRP00533 1210 aa13.02□□□□□ -0.32
CACNB3-224ENST00000552812 SLURP2P0DP57 97 aa13.02□□□□□ -0.32
CACNB3-224ENST00000552812 U2AF2P26368 475 aaKnown RBP eCLIP13.02□□□□□ -0.32
CACNB3-224ENST00000552812 PFKFB3Q16875 520 aaPredicted RBP13.02□□□□□ -0.32
CACNB3-224ENST00000552812 FAM177A1Q8N128 213 aaPredicted RBP13.02□□□□□ -0.32
CACNB3-224ENST00000552812 STAG2Q8N3U4 1231 aa13.02□□□□□ -0.32
CACNB3-224ENST00000552812 CABP5Q9NP86 173 aa13.02□□□□□ -0.32
CACNB3-224ENST00000552812 KLRF2D3W0D1 207 aa13.02□□□□□ -0.33
CACNB3-224ENST00000552812 SCG2P13521 617 aa13.02□□□□□ -0.33
CACNB3-224ENST00000552812 UBE2HP62256 183 aa13.02□□□□□ -0.33
CACNB3-224ENST00000552812 ICA1Q05084 483 aa13.02□□□□□ -0.33
CACNB3-224ENST00000552812 RASA3Q14644 834 aa13.02□□□□□ -0.33
CACNB3-224ENST00000552812 TBC1D10BQ4KMP7 808 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-224ENST00000552812 LRRC47Q8N1G4 583 aaKnown RBP13.02□□□□□ -0.33
CACNB3-224ENST00000552812 FOXP1Q9H334 677 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-224ENST00000552812 RNF181Q9P0P0 153 aa13.02□□□□□ -0.33
CACNB3-224ENST00000552812 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
CACNB3-224ENST00000552812 SEPT2Q15019 361 aa13.01□□□□□ -0.33
CACNB3-224ENST00000552812 GPATCH4Q5T3I0 446 aaKnown RBP13.01□□□□□ -0.33
CACNB3-224ENST00000552812 MYSM1Q5VVJ2 828 aa13.01□□□□□ -0.33
CACNB3-224ENST00000552812 USP17L2Q6R6M4 530 aa13.01□□□□□ -0.33
CACNB3-224ENST00000552812 CLEC10AQ8IUN9 316 aa13.01□□□□□ -0.33
CACNB3-224ENST00000552812 SPATA32Q96LK8 384 aa13.01□□□□□ -0.33
CACNB3-224ENST00000552812 SH3GLB2Q9NR46 395 aa13.01□□□□□ -0.33
CACNB3-224ENST00000552812 HACL1Q9UJ83 578 aa13.01□□□□□ -0.33
CACNB3-224ENST00000552812 KIF28PB7ZC32 967 aa13□□□□□ -0.33
CACNB3-224ENST00000552812 CYTH3O43739 400 aa13□□□□□ -0.33
CACNB3-224ENST00000552812 GDF11O95390 407 aa13□□□□□ -0.33
CACNB3-224ENST00000552812 GH2P01242 217 aa13□□□□□ -0.33
CACNB3-224ENST00000552812 ZNF543Q08ER8 600 aa13□□□□□ -0.33
CACNB3-224ENST00000552812 GNL2Q13823 731 aaKnown RBP13□□□□□ -0.33
CACNB3-224ENST00000552812 APOBEC3FQ8IUX4 373 aaKnown RBP13□□□□□ -0.33
CACNB3-224ENST00000552812 DIS3L2Q8IYB7 885 aaKnown RBP13□□□□□ -0.33
CACNB3-224ENST00000552812 LEO1Q8WVC0 666 aaPredicted RBP13□□□□□ -0.33
CACNB3-224ENST00000552812 TEPSINQ96N21 525 aa13□□□□□ -0.33
CACNB3-224ENST00000552812 PHF20Q9BVI0 1012 aa13□□□□□ -0.33
CACNB3-224ENST00000552812 MTMR7Q9Y216 660 aa13□□□□□ -0.33
CACNB3-224ENST00000552812 USP17L5A8MUK1 530 aa12.99□□□□□ -0.33
CACNB3-224ENST00000552812 GOLGA8HP0CJ92 632 aa12.99□□□□□ -0.33
CACNB3-224ENST00000552812 RRP1BQ14684 758 aaKnown RBP12.99□□□□□ -0.33
CACNB3-224ENST00000552812 NOSTRINQ8IVI9 506 aa12.99□□□□□ -0.33
CACNB3-224ENST00000552812 GMCL1P1Q8NEA9 526 aa12.99□□□□□ -0.33
CACNB3-224ENST00000552812 GPT2Q8TD30 523 aa12.99□□□□□ -0.33
CACNB3-224ENST00000552812 USP28Q96RU2 1077 aa12.99□□□□□ -0.33
CACNB3-224ENST00000552812 RIOX1Q9H6W3 641 aa12.99□□□□□ -0.33
CACNB3-224ENST00000552812 BRMS1Q9HCU9 246 aa12.99□□□□□ -0.33
CACNB3-224ENST00000552812 POLR3EQ9NVU0 708 aa12.99□□□□□ -0.33
CACNB3-224ENST00000552812 RTEL1Q9NZ71 1219 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms