RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 EVX2Q03828 476 aa10.46□□□□□ -0.73
COPB1-210ENST00000533533 GJC2Q5T442 439 aaPredicted RBP10.46□□□□□ -0.73
COPB1-210ENST00000533533 SLC9C2Q5TAH2 1124 aa10.46□□□□□ -0.73
COPB1-210ENST00000533533 ARRDC4Q8NCT1 418 aa10.46□□□□□ -0.73
COPB1-210ENST00000533533 SHCBP1Q8NEM2 672 aa10.46□□□□□ -0.73
COPB1-210ENST00000533533 GUCD1Q96NT3 240 aa10.46□□□□□ -0.73
COPB1-210ENST00000533533 HAUS7Q99871 368 aa10.46□□□□□ -0.73
COPB1-210ENST00000533533 TANGO6Q9C0B7 1094 aa10.46□□□□□ -0.73
COPB1-210ENST00000533533 SPATC1LQ9H0A9 340 aa10.46□□□□□ -0.73
COPB1-210ENST00000533533 COL11A1P12107 1806 aaPredicted RBP10.46□□□□□ -0.74
COPB1-210ENST00000533533 PLXNA1Q9UIW2 1896 aa10.45□□□□□ -0.74
COPB1-210ENST00000533533 SEPT4O43236 478 aa10.45□□□□□ -0.74
COPB1-210ENST00000533533 COBLO75128 1261 aa10.45□□□□□ -0.74
COPB1-210ENST00000533533 MX1P20591 662 aa10.45□□□□□ -0.74
COPB1-210ENST00000533533 SLC39A5Q6ZMH5 540 aa10.45□□□□□ -0.74
COPB1-210ENST00000533533 TMEM179Q6ZVK1 233 aa10.45□□□□□ -0.74
COPB1-210ENST00000533533 MB21D1Q8N884 522 aa10.45□□□□□ -0.74
COPB1-210ENST00000533533 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.45□□□□□ -0.74
COPB1-210ENST00000533533 DCP1AQ9NPI6 582 aaPredicted RBP10.45□□□□□ -0.74
COPB1-210ENST00000533533 SLC5A4Q9NY91 659 aa10.45□□□□□ -0.74
COPB1-210ENST00000533533 ATP11BQ9Y2G3 1177 aa10.45□□□□□ -0.74
COPB1-210ENST00000533533 TTC41PQ6P2S7 1318 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 ZNF532Q9HCE3 1301 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 TCRBV5S4A2TA0A5A2 114 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 KBTBD13C9JR72 458 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 PLS1Q14651 629 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 KIAA1755Q5JYT7 1200 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 ANO1Q5XXA6 986 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 CHD1LQ86WJ1 897 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 SMC5Q8IY18 1101 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 ABRAQ8N0Z2 381 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 SLC44A5Q8NCS7 719 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 SDR42E1Q8WUS8 393 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 FAM161BQ96MY7 647 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 MROH8Q9H579 483 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 SWAP70Q9UH65 585 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 MYH7P12883 1935 aa10.44□□□□□ -0.74
COPB1-210ENST00000533533 FLOT1O75955 427 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 CYP2D6P10635 497 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 SNX17Q15036 470 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 SHHQ15465 462 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 TRIM60Q495X7 471 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 PRAMEF19Q5SWL8 479 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 ZNF697Q5TEC3 545 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 ZSCAN25Q6NSZ9 544 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 NCAPG2Q86XI2 1143 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 SIAH1Q8IUQ4 282 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.43□□□□□ -0.74
COPB1-210ENST00000533533 SPICE1Q8N0Z3 855 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 LCORLQ8N3X6 602 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 ATG4CQ96DT6 458 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 DYNLL2Q96FJ2 89 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 COL25A1Q9BXS0 654 aaPredicted RBP10.43□□□□□ -0.74
COPB1-210ENST00000533533 SH2D4AQ9H788 454 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 ARHGEF10LQ9HCE6 1279 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 TMX2Q9Y320 296 aa10.43□□□□□ -0.74
COPB1-210ENST00000533533 FCER1AP12319 257 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 AKR1B1P15121 316 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 ADCYAP1R1P41586 468 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 NUCB1Q02818 461 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 ICA1Q05084 483 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 LRRC41Q15345 812 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 SLFNL1Q499Z3 407 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 C9orf50Q5SZB4 431 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 C1orf53Q5VUE5 145 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 CLEC10AQ8IUN9 316 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 SPDYE1Q8NFV5 336 aaPredicted RBP10.42□□□□□ -0.74
COPB1-210ENST00000533533 BADQ92934 168 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 MAML3Q96JK9 1138 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 FSD1Q9BTV5 496 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 VCPKMTQ9H867 229 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 ARMT1Q9H993 441 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 PRDM5Q9NQX1 630 aaPredicted RBP10.42□□□□□ -0.74
COPB1-210ENST00000533533 PDLIM7Q9NR12 457 aa10.42□□□□□ -0.74
COPB1-210ENST00000533533 SPTBN5Q9NRC6 3674 aaKnown RBP10.42□□□□□ -0.74
COPB1-210ENST00000533533 MCM3APO60318 1980 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 TRIM43BA6NCK2 446 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 TRIM6-TRIM34B2RNG4 842 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 WDR46O15213 610 aaKnown RBP10.41□□□□□ -0.74
COPB1-210ENST00000533533 PRKAB2O43741 272 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 SLC25A27O95847 323 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 CHGBP05060 677 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 ADD2P35612 726 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 PDE1AP54750 535 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 TMEM132BQ14DG7 1078 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 LRRFIP1Q32MZ4 808 aaKnown RBP10.41□□□□□ -0.74
COPB1-210ENST00000533533 FAM47AQ5JRC9 791 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 SH3RF1Q7Z6J0 888 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 KBTBD3Q8NAB2 608 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 PI4K2BQ8TCG2 481 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 FERMT2Q96AC1 680 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 TRIM43Q96BQ3 446 aaPredicted RBP10.41□□□□□ -0.74
COPB1-210ENST00000533533 CCDC17Q96LX7 622 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 CDX2Q99626 313 aaPredicted RBP10.41□□□□□ -0.74
COPB1-210ENST00000533533 SEMA6BQ9H3T3 888 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 ATP8A2Q9NTI2 1148 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 NRBP1Q9UHY1 535 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 ADAMTS5Q9UNA0 930 aa10.41□□□□□ -0.74
COPB1-210ENST00000533533 MBD4O95243 580 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms