RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 FMR1Q06787 632 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 CHAF1AQ13111 956 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 KRT72Q14CN4 511 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 MAP7D1Q3KQU3 841 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 SMUG1Q53HV7 270 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 ANKRD39Q53RE8 183 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 BRDTQ58F21 947 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 ARMC4Q5T2S8 1044 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 CPLX2Q6PUV4 134 aaKnown RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 CEP68Q76N32 757 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 PNMA8AQ86V59 439 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 TRIM42Q8IWZ5 723 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 ABTB2Q8N961 1025 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 KCT2Q8NC54 265 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 HDAC7Q8WUI4 952 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 C7orf43Q8WVR3 580 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 UCN2Q96RP3 112 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 MPHOSPH9Q99550 1183 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 TMEM165Q9HC07 324 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 MRGBPQ9NV56 204 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 NLRP2Q9NX02 1062 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 ZMIZ1Q9ULJ6 1067 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 PPP1R9AQ9ULJ8 1098 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 EVC2Q86UK5 1308 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 COL4A5P29400 1685 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 CCDC66A2RUB6 948 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 FAM221BA6H8Z2 402 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 PALM3A6NDB9 673 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 SNX2O60749 519 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 CSPG5O95196 566 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 ARIH2O95376 493 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 ATF7P17544 494 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 CHMLP26374 656 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 BMP8BP34820 402 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 RPS6KA3P51812 740 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 SLMAPQ14BN4 828 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 RASA2Q15283 850 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 CFAP58Q5T655 872 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 PPP4R3AQ6IN85 833 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 CLIP3Q96DZ5 547 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 RBM18Q96H35 190 aaKnown RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 RMDN2Q96LZ7 410 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 ALPK1Q96QP1 1244 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 TCHPQ9BT92 498 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 BEGAINQ9BUH8 593 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 C2orf49Q9BVC5 232 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 PSD3Q9NYI0 1048 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 C2CD2Q9Y426 696 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 TLL2Q9Y6L7 1015 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 SMTNL1A8MU46 457 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 FOXN3O00409 490 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 SASH1O94885 1247 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 TNFAIP3P21580 790 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 PDE3BQ13370 1112 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 FKBP15Q5T1M5 1219 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 AP1ARQ63HQ0 302 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 ZNF467Q7Z7K2 595 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 DAAM2Q86T65 1068 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 SMYD2Q9NRG4 433 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 CEP131Q9UPN4 1083 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 PA2G4Q9UQ80 394 aaKnown RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 ATP8A1Q9Y2Q0 1164 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 ROBO3Q96MS0 1386 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 BHMG1C9JSJ3 638 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 PRMT3O60678 531 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 KIF5BP33176 963 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 FANCCQ00597 558 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 CYP4A11Q02928 519 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 PPP2R5CQ13362 524 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 MUM1Q2TAK8 710 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 HHATQ5VTY9 493 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 DGKHQ86XP1 1220 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 MCF2L2Q86YR7 1114 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 EFCAB13Q8IY85 973 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 STK32AQ8WU08 396 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 CEP95Q96GE4 821 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 GPR101Q96P66 508 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 PRAM1Q96QH2 718 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 EXOC1Q9NV70 894 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 STAP2Q9UGK3 403 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 PTPRFP10586 1907 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 PARP14Q460N5 1801 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 SOS1Q07889 1333 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 TMEM265A0A087WTH1 108 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 CCNCP24863 283 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 CA8P35219 290 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 CSE1LP55060 971 aaKnown RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 NUCB1Q02818 461 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 WTAPQ15007 396 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 TAF7Q15545 349 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 FAM133BQ5BKY9 247 aaKnown RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 DALRD3Q5D0E6 543 aaKnown RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 ZC3H12BQ5HYM0 836 aaKnown RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 GIGYF2Q6Y7W6 1299 aaKnown RBP4.27□□□□□ -1.73
PTPN22-207ENST00000528414 RNF19AQ9NV58 838 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 CEP72Q9P209 647 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 SPO11Q9Y5K1 396 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 SNX5Q9Y5X3 404 aa4.27□□□□□ -1.73
PTPN22-207ENST00000528414 USP42Q9H9J4 1324 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms