RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 PUS7LQ9H0K6 701 aaKnown RBP17.51■□□□□ 0.39
SCARNA20.5-201ENST00000516991 ADAMTS5Q9UNA0 930 aa17.51■□□□□ 0.39
SCARNA20.5-201ENST00000516991 ROBO3Q96MS0 1386 aa17.51■□□□□ 0.39
SCARNA20.5-201ENST00000516991 ZNFX1Q9P2E3 1918 aaKnown RBP17.51■□□□□ 0.39
SCARNA20.5-201ENST00000516991 SMARCA5O60264 1052 aaPredicted RBP17.5■□□□□ 0.39
SCARNA20.5-201ENST00000516991 TMEM132BQ14DG7 1078 aa17.5■□□□□ 0.39
SCARNA20.5-201ENST00000516991 SAMD1Q6SPF0 538 aaPredicted RBP17.5■□□□□ 0.39
SCARNA20.5-201ENST00000516991 RIOX2Q8IUF8 465 aa17.5■□□□□ 0.39
SCARNA20.5-201ENST00000516991 KBTBD3Q8NAB2 608 aa17.5■□□□□ 0.39
SCARNA20.5-201ENST00000516991 MAML3Q96JK9 1138 aa17.5■□□□□ 0.39
SCARNA20.5-201ENST00000516991 STRBPQ96SI9 672 aaKnown RBP17.5■□□□□ 0.39
SCARNA20.5-201ENST00000516991 PRKAG2Q9UGJ0 569 aa17.5■□□□□ 0.39
SCARNA20.5-201ENST00000516991 PPP1R9AQ9ULJ8 1098 aa17.5■□□□□ 0.39
SCARNA20.5-201ENST00000516991 SMIM22K7EJ46 135 aa17.49■□□□□ 0.39
SCARNA20.5-201ENST00000516991 CHGBP05060 677 aa17.49■□□□□ 0.39
SCARNA20.5-201ENST00000516991 ZFYP08048 801 aaPredicted RBP17.49■□□□□ 0.39
SCARNA20.5-201ENST00000516991 RTP1P59025 263 aa17.49■□□□□ 0.39
SCARNA20.5-201ENST00000516991 MDM2Q00987 491 aaPredicted RBP17.49■□□□□ 0.39
SCARNA20.5-201ENST00000516991 LRRFIP1Q32MZ4 808 aaKnown RBP17.49■□□□□ 0.39
SCARNA20.5-201ENST00000516991 C20orf194Q5TEA3 1177 aa17.49■□□□□ 0.39
SCARNA20.5-201ENST00000516991 APPBP2Q92624 585 aa17.49■□□□□ 0.39
SCARNA20.5-201ENST00000516991 MMP19Q99542 508 aa17.49■□□□□ 0.39
SCARNA20.5-201ENST00000516991 PLXNA1Q9UIW2 1896 aa17.49■□□□□ 0.39
SCARNA20.5-201ENST00000516991 LTBP2Q14767 1821 aa17.49■□□□□ 0.39
SCARNA20.5-201ENST00000516991 VWA5AO00534 786 aa17.48■□□□□ 0.39
SCARNA20.5-201ENST00000516991 ATN1P54259 1190 aaPredicted RBP17.48■□□□□ 0.39
SCARNA20.5-201ENST00000516991 KCTD2Q14681 263 aa17.48■□□□□ 0.39
SCARNA20.5-201ENST00000516991 GJC2Q5T442 439 aaPredicted RBP17.48■□□□□ 0.39
SCARNA20.5-201ENST00000516991 DEFB123Q8N688 67 aa17.48■□□□□ 0.39
SCARNA20.5-201ENST00000516991 MKNK2Q9HBH9 465 aa17.48■□□□□ 0.39
SCARNA20.5-201ENST00000516991 ZNF287Q9HBT7 754 aa17.48■□□□□ 0.39
SCARNA20.5-201ENST00000516991 FBXO28Q9NVF7 368 aa17.48■□□□□ 0.39
SCARNA20.5-201ENST00000516991 DIS3Q9Y2L1 958 aaKnown RBP17.48■□□□□ 0.39
SCARNA20.5-201ENST00000516991 GSG1L2A8MUP6 293 aa17.47■□□□□ 0.39
SCARNA20.5-201ENST00000516991 RAD21O60216 631 aa17.47■□□□□ 0.39
SCARNA20.5-201ENST00000516991 GNAT2P19087 354 aa17.47■□□□□ 0.39
SCARNA20.5-201ENST00000516991 RASA1P20936 1047 aa17.47■□□□□ 0.39
SCARNA20.5-201ENST00000516991 STAT3P40763 770 aa17.47■□□□□ 0.39
SCARNA20.5-201ENST00000516991 FAM83BQ5T0W9 1011 aa17.47■□□□□ 0.39
SCARNA20.5-201ENST00000516991 DCTPP1Q9H773 170 aa17.47■□□□□ 0.39
SCARNA20.5-201ENST00000516991 NYAP2Q9P242 653 aa17.47■□□□□ 0.39
SCARNA20.5-201ENST00000516991 ZNF214Q9UL59 606 aaPredicted RBP17.47■□□□□ 0.39
SCARNA20.5-201ENST00000516991 DNAH12Q6ZR08 3092 aa17.46■□□□□ 0.39
SCARNA20.5-201ENST00000516991 RNF113AO15541 343 aaKnown RBP17.46■□□□□ 0.39
SCARNA20.5-201ENST00000516991 SNX17Q15036 470 aa17.46■□□□□ 0.39
SCARNA20.5-201ENST00000516991 LRRC41Q15345 812 aa17.46■□□□□ 0.39
SCARNA20.5-201ENST00000516991 SLC17A8Q8NDX2 589 aa17.46■□□□□ 0.39
SCARNA20.5-201ENST00000516991 REPS2Q8NFH8 660 aa17.46■□□□□ 0.39
SCARNA20.5-201ENST00000516991 SLF1Q9BQI6 1058 aa17.46■□□□□ 0.39
SCARNA20.5-201ENST00000516991 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.46■□□□□ 0.39
SCARNA20.5-201ENST00000516991 SYNPO2Q9UMS6 1093 aa17.46■□□□□ 0.39
SCARNA20.5-201ENST00000516991 ATP11BQ9Y2G3 1177 aa17.46■□□□□ 0.39
SCARNA20.5-201ENST00000516991 MYH4Q9Y623 1939 aa17.46■□□□□ 0.39
SCARNA20.5-201ENST00000516991 GPAA1O43292 621 aa17.45■□□□□ 0.38
SCARNA20.5-201ENST00000516991 RARBP10826 455 aa17.45■□□□□ 0.38
SCARNA20.5-201ENST00000516991 TDO2P48775 406 aa17.45■□□□□ 0.38
SCARNA20.5-201ENST00000516991 FAM47AQ5JRC9 791 aa17.45■□□□□ 0.38
SCARNA20.5-201ENST00000516991 ANO1Q5XXA6 986 aa17.45■□□□□ 0.38
SCARNA20.5-201ENST00000516991 SLC39A5Q6ZMH5 540 aa17.45■□□□□ 0.38
SCARNA20.5-201ENST00000516991 OSBP2Q969R2 916 aa17.45■□□□□ 0.38
SCARNA20.5-201ENST00000516991 TINF2Q9BSI4 451 aa17.45■□□□□ 0.38
SCARNA20.5-201ENST00000516991 TEX13BQ9BXU2 312 aa17.45■□□□□ 0.38
SCARNA20.5-201ENST00000516991 MINDY4BA8MYZ0 360 aa17.44■□□□□ 0.38
SCARNA20.5-201ENST00000516991 NDUFB10O96000 172 aa17.44■□□□□ 0.38
SCARNA20.5-201ENST00000516991 MYCNP04198 464 aaPredicted RBP17.44■□□□□ 0.38
SCARNA20.5-201ENST00000516991 ZNF792Q3KQV3 632 aa17.44■□□□□ 0.38
SCARNA20.5-201ENST00000516991 PRAMEF19Q5SWL8 479 aa17.44■□□□□ 0.38
SCARNA20.5-201ENST00000516991 C1orf53Q5VUE5 145 aa17.44■□□□□ 0.38
SCARNA20.5-201ENST00000516991 MSL3Q8N5Y2 521 aaKnown RBP17.44■□□□□ 0.38
SCARNA20.5-201ENST00000516991 XPNPEP3Q9NQH7 507 aa17.44■□□□□ 0.38
SCARNA20.5-201ENST00000516991 MTMR10Q9NXD2 777 aa17.44■□□□□ 0.38
SCARNA20.5-201ENST00000516991 STXBP5LQ9Y2K9 1186 aa17.44■□□□□ 0.38
SCARNA20.5-201ENST00000516991 TTC41PQ6P2S7 1318 aa17.44■□□□□ 0.38
SCARNA20.5-201ENST00000516991 SMCHD1A6NHR9 2005 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 F5H6K3 240 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 ERC2O15083 957 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 PGK2P07205 417 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 AKR1A1P14550 325 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 ADCYAP1R1P41586 468 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 KLRC3Q07444 240 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 FAM109BQ6ICB4 259 aaPredicted RBP17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 Q7L0L9 218 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 RNF180Q86T96 592 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 PRPF38AQ8NAV1 312 aaKnown RBP17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 NACAP1Q9BZK3 213 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 EPB41L4AQ9HCS5 686 aaPredicted RBP17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 PHF24Q9UPV7 400 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 CNPY2Q9Y2B0 182 aa17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 CTDP1Q9Y5B0 961 aaPredicted RBP17.43■□□□□ 0.38
SCARNA20.5-201ENST00000516991 PLIN4Q96Q06 1357 aa17.42■□□□□ 0.38
SCARNA20.5-201ENST00000516991 IGKV6D-41A0A0C4DH26 115 aa17.42■□□□□ 0.38
SCARNA20.5-201ENST00000516991 ATP2A1O14983 1001 aa17.42■□□□□ 0.38
SCARNA20.5-201ENST00000516991 TRIM60Q495X7 471 aa17.42■□□□□ 0.38
SCARNA20.5-201ENST00000516991 TSHZ3Q63HK5 1081 aa17.42■□□□□ 0.38
SCARNA20.5-201ENST00000516991 SNRNP48Q6IEG0 339 aaKnown RBP17.42■□□□□ 0.38
SCARNA20.5-201ENST00000516991 ZNF444Q8N0Y2 327 aaPredicted RBP17.42■□□□□ 0.38
SCARNA20.5-201ENST00000516991 NUP88Q99567 741 aaPredicted RBP17.42■□□□□ 0.38
SCARNA20.5-201ENST00000516991 PRDM5Q9NQX1 630 aaPredicted RBP17.42■□□□□ 0.38
SCARNA20.5-201ENST00000516991 SYNGAP1Q96PV0 1343 aa17.42■□□□□ 0.38
SCARNA20.5-201ENST00000516991 COL6A3P12111 3177 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms