RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 SLC25A27O95847 323 aa22.13■■□□□ 1.13
SPOP-220ENST00000515508 EEF2P13639 858 aaKnown RBP22.13■■□□□ 1.13
SPOP-220ENST00000515508 GJC2Q5T442 439 aaPredicted RBP22.13■■□□□ 1.13
SPOP-220ENST00000515508 DDRGK1Q96HY6 314 aa22.13■■□□□ 1.13
SPOP-220ENST00000515508 LBHD1Q9BQE6 289 aaPredicted RBP22.13■■□□□ 1.13
SPOP-220ENST00000515508 KANSL2Q9H9L4 492 aa22.13■■□□□ 1.13
SPOP-220ENST00000515508 CUL9Q8IWT3 2517 aa22.13■■□□□ 1.13
SPOP-220ENST00000515508 UNC80Q8N2C7 3258 aa22.12■■□□□ 1.13
SPOP-220ENST00000515508 KBTBD13C9JR72 458 aa22.12■■□□□ 1.13
SPOP-220ENST00000515508 FCER1AP12319 257 aa22.12■■□□□ 1.13
SPOP-220ENST00000515508 SNX17Q15036 470 aa22.12■■□□□ 1.13
SPOP-220ENST00000515508 CTR9Q6PD62 1173 aa22.12■■□□□ 1.13
SPOP-220ENST00000515508 LRRCC1Q9C099 1032 aa22.12■■□□□ 1.13
SPOP-220ENST00000515508 PUS7LQ9H0K6 701 aaKnown RBP22.12■■□□□ 1.13
SPOP-220ENST00000515508 SLC4A4Q9Y6R1 1079 aa22.12■■□□□ 1.13
SPOP-220ENST00000515508 ROBO3Q96MS0 1386 aa22.12■■□□□ 1.13
SPOP-220ENST00000515508 ANO1Q5XXA6 986 aa22.11■■□□□ 1.13
SPOP-220ENST00000515508 ZSCAN25Q6NSZ9 544 aa22.11■■□□□ 1.13
SPOP-220ENST00000515508 RIOX2Q8IUF8 465 aa22.11■■□□□ 1.13
SPOP-220ENST00000515508 ARPP21Q9UBL0 812 aaPredicted RBP22.11■■□□□ 1.13
SPOP-220ENST00000515508 PRKAG2Q9UGJ0 569 aa22.11■■□□□ 1.13
SPOP-220ENST00000515508 NRBP1Q9UHY1 535 aa22.11■■□□□ 1.13
SPOP-220ENST00000515508 PRAMEF19Q5SWL8 479 aa22.1■■□□□ 1.13
SPOP-220ENST00000515508 SLC39A5Q6ZMH5 540 aa22.1■■□□□ 1.13
SPOP-220ENST00000515508 GOPCQ9HD26 462 aa22.1■■□□□ 1.13
SPOP-220ENST00000515508 FBXO28Q9NVF7 368 aa22.1■■□□□ 1.13
SPOP-220ENST00000515508 PPP1R9AQ9ULJ8 1098 aa22.1■■□□□ 1.13
SPOP-220ENST00000515508 ATP11BQ9Y2G3 1177 aa22.1■■□□□ 1.13
SPOP-220ENST00000515508 VWA5AO00534 786 aa22.09■■□□□ 1.13
SPOP-220ENST00000515508 DLL1O00548 723 aa22.09■■□□□ 1.13
SPOP-220ENST00000515508 LRRC41Q15345 812 aa22.09■■□□□ 1.13
SPOP-220ENST00000515508 FAM47AQ5JRC9 791 aa22.09■■□□□ 1.13
SPOP-220ENST00000515508 C1orf53Q5VUE5 145 aa22.09■■□□□ 1.13
SPOP-220ENST00000515508 FAM109BQ6ICB4 259 aaPredicted RBP22.09■■□□□ 1.13
SPOP-220ENST00000515508 REPS2Q8NFH8 660 aa22.09■■□□□ 1.13
SPOP-220ENST00000515508 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.09■■□□□ 1.13
SPOP-220ENST00000515508 ZNF214Q9UL59 606 aaPredicted RBP22.09■■□□□ 1.13
SPOP-220ENST00000515508 SMCHD1A6NHR9 2005 aa22.09■■□□□ 1.13
SPOP-220ENST00000515508 POTEB2H3BUK9 544 aa22.08■■□□□ 1.13
SPOP-220ENST00000515508 SAMD1Q6SPF0 538 aaPredicted RBP22.08■■□□□ 1.13
SPOP-220ENST00000515508 MMP19Q99542 508 aa22.08■■□□□ 1.13
SPOP-220ENST00000515508 RCAN3Q9UKA8 241 aa22.08■■□□□ 1.13
SPOP-220ENST00000515508 DIS3Q9Y2L1 958 aaKnown RBP22.08■■□□□ 1.13
SPOP-220ENST00000515508 COPB2P35606 906 aa22.07■■□□□ 1.12
SPOP-220ENST00000515508 ZNF792Q3KQV3 632 aa22.07■■□□□ 1.12
SPOP-220ENST00000515508 SBK1Q52WX2 424 aa22.07■■□□□ 1.12
SPOP-220ENST00000515508 TINF2Q9BSI4 451 aa22.07■■□□□ 1.12
SPOP-220ENST00000515508 MYH4Q9Y623 1939 aa22.06■■□□□ 1.12
SPOP-220ENST00000515508 SMARCA5O60264 1052 aaPredicted RBP22.06■■□□□ 1.12
SPOP-220ENST00000515508 STAT3P40763 770 aa22.06■■□□□ 1.12
SPOP-220ENST00000515508 ADCYAP1R1P41586 468 aa22.06■■□□□ 1.12
SPOP-220ENST00000515508 KCTD2Q14681 263 aa22.06■■□□□ 1.12
SPOP-220ENST00000515508 TRIM60Q495X7 471 aa22.06■■□□□ 1.12
SPOP-220ENST00000515508 FAM83BQ5T0W9 1011 aa22.06■■□□□ 1.12
SPOP-220ENST00000515508 GIMAP6Q6P9H5 292 aa22.06■■□□□ 1.12
SPOP-220ENST00000515508 STRBPQ96SI9 672 aaKnown RBP22.06■■□□□ 1.12
SPOP-220ENST00000515508 PDLIM7Q9NR12 457 aa22.06■■□□□ 1.12
SPOP-220ENST00000515508 ECHDC1Q9NTX5 307 aa22.06■■□□□ 1.12
SPOP-220ENST00000515508 PGK2P07205 417 aa22.05■■□□□ 1.12
SPOP-220ENST00000515508 RASA1P20936 1047 aa22.05■■□□□ 1.12
SPOP-220ENST00000515508 C20orf194Q5TEA3 1177 aa22.05■■□□□ 1.12
SPOP-220ENST00000515508 KBTBD3Q8NAB2 608 aa22.05■■□□□ 1.12
SPOP-220ENST00000515508 PHF24Q9UPV7 400 aa22.05■■□□□ 1.12
SPOP-220ENST00000515508 GSG1L2A8MUP6 293 aa22.04■■□□□ 1.12
SPOP-220ENST00000515508 MYCNP04198 464 aaPredicted RBP22.04■■□□□ 1.12
SPOP-220ENST00000515508 RARBP10826 455 aa22.04■■□□□ 1.12
SPOP-220ENST00000515508 GUCD1Q96NT3 240 aa22.04■■□□□ 1.12
SPOP-220ENST00000515508 XPNPEP3Q9NQH7 507 aa22.04■■□□□ 1.12
SPOP-220ENST00000515508 PRDM5Q9NQX1 630 aaPredicted RBP22.04■■□□□ 1.12
SPOP-220ENST00000515508 NYAP2Q9P242 653 aa22.04■■□□□ 1.12
SPOP-220ENST00000515508 EYSQ5T1H1 3165 aa22.03■■□□□ 1.12
SPOP-220ENST00000515508 APPBP2Q92624 585 aa22.03■■□□□ 1.12
SPOP-220ENST00000515508 FERMT2Q96AC1 680 aa22.03■■□□□ 1.12
SPOP-220ENST00000515508 SLF1Q9BQI6 1058 aa22.03■■□□□ 1.12
SPOP-220ENST00000515508 TEX13BQ9BXU2 312 aa22.03■■□□□ 1.12
SPOP-220ENST00000515508 RAD21O60216 631 aa22.02■■□□□ 1.12
SPOP-220ENST00000515508 ZNF865P0CJ78 1059 aaPredicted RBP22.02■■□□□ 1.12
SPOP-220ENST00000515508 TAL1P17542 331 aaPredicted RBP22.02■■□□□ 1.12
SPOP-220ENST00000515508 RNF180Q86T96 592 aa22.02■■□□□ 1.12
SPOP-220ENST00000515508 MSL3Q8N5Y2 521 aaKnown RBP22.02■■□□□ 1.12
SPOP-220ENST00000515508 BADQ92934 168 aa22.02■■□□□ 1.12
SPOP-220ENST00000515508 OSBP2Q969R2 916 aa22.02■■□□□ 1.12
SPOP-220ENST00000515508 NUP88Q99567 741 aaPredicted RBP22.02■■□□□ 1.12
SPOP-220ENST00000515508 CDH23Q9H251 3354 aa22.02■■□□□ 1.12
SPOP-220ENST00000515508 IGKV6D-41A0A0C4DH26 115 aa22.01■■□□□ 1.11
SPOP-220ENST00000515508 TRIM43BA6NCK2 446 aa22.01■■□□□ 1.11
SPOP-220ENST00000515508 F5H6K3 240 aa22.01■■□□□ 1.11
SPOP-220ENST00000515508 ATP2A1O14983 1001 aa22.01■■□□□ 1.11
SPOP-220ENST00000515508 AKR1A1P14550 325 aa22.01■■□□□ 1.11
SPOP-220ENST00000515508 KLRC3Q07444 240 aa22.01■■□□□ 1.11
SPOP-220ENST00000515508 SHHQ15465 462 aa22.01■■□□□ 1.11
SPOP-220ENST00000515508 C9orf50Q5SZB4 431 aa22.01■■□□□ 1.11
SPOP-220ENST00000515508 SH3RF1Q7Z6J0 888 aa22.01■■□□□ 1.11
SPOP-220ENST00000515508 TRIM43Q96BQ3 446 aaPredicted RBP22.01■■□□□ 1.11
SPOP-220ENST00000515508 EPB41L4AQ9HCS5 686 aaPredicted RBP22.01■■□□□ 1.11
SPOP-220ENST00000515508 ADAMTS4O75173 837 aa22■■□□□ 1.11
SPOP-220ENST00000515508 NDUFB10O96000 172 aa22■■□□□ 1.11
SPOP-220ENST00000515508 PGK1P00558 417 aa22■■□□□ 1.11
SPOP-220ENST00000515508 TLE2Q04725 743 aa22■■□□□ 1.11
SPOP-220ENST00000515508 ZNF697Q5TEC3 545 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms